CN189512

Overview
NameCN189512
Unique NameCN189512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189512 vs. ExPASy Swiss-Prot
Match: ALF1_CAEEL (Fructose-bisphosphate aldolase 1 OS=Caenorhabditis elegans GN=aldo-1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.843e-35
Identity = 79/140 (56.43%), Postives = 96/140 (68.57%), Query Frame = -2
Query:  300 GTLLKPNMVTPGSEAPKVTPDV--IAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 713
            GTLLKPNMVT G       P    I   TV ALQR +P+AVP VVFLSGGQSEE+AT NLNA+NQ+  KKPW+L+FS+GRALQ S L  WAGK+EN+  AQ   L R + NS A++G Y GDA     A++SL V ++ Y
Sbjct:  227 GTLLKPNMVTSGQSFTGEKPSNADIGLATVTALQRGVPSAVPGVVFLSGGQSEEDATLNLNAINQVSGKKPWALTFSYGRALQASCLAKWAGKDENIAAAQEVLLHRAQVNSLASVGKYTGDASADAAASQSLFVANHSY 366          
BLAST of CN189512 vs. ExPASy Swiss-Prot
Match: ALDOC_MACFA (Fructose-bisphosphate aldolase C OS=Macaca fascicularis GN=ALDOC PE=2 SV=3)

HSP 1 Score: 148.288 bits (373), Expect = 3.843e-35
Identity = 75/139 (53.96%), Postives = 96/139 (69.06%), Query Frame = -2
Query:  300 GTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 713
            GTLLKPNMVTPG   P K TP+ IA  TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G  + G  AA+SL++ ++ Y
Sbjct:  226 GTLLKPNMVTPGHACPIKYTPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CN189512 vs. ExPASy Swiss-Prot
Match: ALDOC_HUMAN (Fructose-bisphosphate aldolase C OS=Homo sapiens GN=ALDOC PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 5.019e-35
Identity = 75/139 (53.96%), Postives = 96/139 (69.06%), Query Frame = -2
Query:  300 GTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 713
            GTLLKPNMVTPG   P K TP+ IA  TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G  + G  AA+SL++ ++ Y
Sbjct:  226 GTLLKPNMVTPGHACPIKYTPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASFNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CN189512 vs. ExPASy Swiss-Prot
Match: ALDOA_RAT (Fructose-bisphosphate aldolase A OS=Rattus norvegicus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 5.019e-35
Identity = 78/139 (56.12%), Postives = 97/139 (69.78%), Query Frame = -2
Query:  300 GTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 713
            GTLLKPNMVTPG     K + + IA  TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL + ++ Y
Sbjct:  226 GTLLKPNMVTPGHACTQKFSNEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYIKRALANSLACQGKYTPSGQSGAAASESLFISNHAY 364          
BLAST of CN189512 vs. ExPASy Swiss-Prot
Match: ALF_DICDI (Fructose-bisphosphate aldolase OS=Dictyostelium discoideum GN=fba PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.562e-35
Identity = 79/139 (56.83%), Postives = 97/139 (69.78%), Query Frame = -2
Query:  300 GTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 713
            G LLKPNMV  G++ P K T + I + TVR LQRT+P A+  VVFLSGGQ+E EAT NLNAMN L  + PW+LSFS+GRALQ S +  W G+  NV+ A+  +L R K NS A LG Y G+   G  A+ESL+VKDYKY
Sbjct:  221 GALLKPNMVVNGTDCPIKATSEQIGKFTVRTLQRTVPPALTGVVFLSGGQTEIEATANLNAMNVLPNR-PWALSFSYGRALQASVISTWKGESANVEAARKVYLHRAKCNSLAQLGKYTGEESTG-SASESLYVKDYKY 357          
BLAST of CN189512 vs. ExPASy Swiss-Prot
Match: ALF_DROME (Fructose-bisphosphate aldolase OS=Drosophila melanogaster GN=Ald PE=1 SV=5)

HSP 1 Score: 146.362 bits (368), Expect = 1.460e-34
Identity = 80/139 (57.55%), Postives = 97/139 (69.78%), Query Frame = -2
Query:  300 GTLLKPNMVTPGSEAPKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTY-KGDAQLGEGAAESLHVKDYKY 713
            GTLLKPNMVT G  A K TP+ IA  TV+AL+RT+PAAV  V FLSGGQSEEEAT NL+A+N +   +PW+L+FS+GRALQ S L+AWAGK+EN+   Q   L R KAN +A  G Y  G A  G G   SL V ++ Y
Sbjct:  226 GTLLKPNMVTAGQSAKKNTPEEIALATVQALRRTVPAAVTGVTFLSGGQSEEEATVNLSAINNVPLIRPWALTFSYGRALQASVLRAWAGKKENIAAGQNELLKRAKANGDAAQGKYVAGSAGAGSG---SLFVANHAY 361          
BLAST of CN189512 vs. ExPASy Swiss-Prot
Match: ALF_ECHMU (Fructose-bisphosphate aldolase OS=Echinococcus multilocularis GN=FBPA PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.907e-34
Identity = 80/139 (57.55%), Postives = 97/139 (69.78%), Query Frame = -2
Query:  300 GTLLKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 713
            GTLLKPNMVT G    K  + +  A  TV ALQRT+P AVP VVFLSGGQSE +ATRNLNA+N+   KKPW+LSFSFGRALQ S + AW GK ENV+  QA FL   KAN  A+LG ++G+ +   G  +SL V ++ Y
Sbjct:  226 GTLLKPNMVTCGQSCTKKYSVEDNARATVEALQRTVPVAVPGVVFLSGGQSELDATRNLNAINKYPGKKPWALSFSFGRALQASAIAAWQGKPENVKAGQAEFLQLAKANGAASLGKFEGELKTAAG-QKSLFVANHAY 363          
BLAST of CN189512 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 3.253e-34
Identity = 77/139 (55.40%), Postives = 96/139 (69.06%), Query Frame = -2
Query:  300 GTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 713
            G LLKP+MVTPG+EA  + TP+ +A +T++ L+  +P AVP ++FLSGGQSE EAT NLNAMNQ     PW +SFS+ RALQ + LK W GKEENV+ AQ   L R KANS A LG Y G+ +  E A E + VK Y Y
Sbjct:  264 GILLKPSMVTPGAEATDRATPEQVASYTLKLLRNRIPPAVPGIMFLSGGQSELEATLNLNAMNQ--APNPWHVSFSYARALQNTCLKTWGGKEENVKAAQDILLARAKANSLAQLGKYTGEGE-SEEAKEGMFVKGYTY 399          
BLAST of CN189512 vs. ExPASy Swiss-Prot
Match: ALDOB_SPAAU (Fructose-bisphosphate aldolase B OS=Sparus aurata GN=aldob PE=2 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 3.253e-34
Identity = 73/139 (52.52%), Postives = 92/139 (66.19%), Query Frame = -2
Query:  300 GTLLKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 713
            GTLLKPNMVTPG   PK  TP  +A  TV AL+RT+PA+VP + FLSGGQSEEEA+ +LNA+NQ+   +PW L+FS+GRALQ S L AW GK+ N    Q  F+ R K N  A+ G YK      + + +SL+   Y Y
Sbjct:  226 GTLLKPNMVTPGHSCPKKFTPQEVAMATVTALRRTVPASVPGICFLSGGQSEEEASIHLNAINQVPLHRPWKLTFSYGRALQASALAAWQGKDANKAATQQVFVTRAKINGLASKGEYKPSGSADQASQQSLYTASYVY 364          
BLAST of CN189512 vs. ExPASy Swiss-Prot
Match: ALDOA_RABIT (Fructose-bisphosphate aldolase A OS=Oryctolagus cuniculus GN=ALDOA PE=1 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 4.249e-34
Identity = 77/139 (55.40%), Postives = 96/139 (69.06%), Query Frame = -2
Query:  300 GTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 713
            GTLLKPNMVTPG     K + + IA  TV AL+RT+P AV  V FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL + ++ Y
Sbjct:  226 GTLLKPNMVTPGHACTQKYSHEEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFISNHAY 364          
The following BLAST results are available for this feature:
BLAST of CN189512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF1_CAEEL3.843e-3556.43Fructose-bisphosphate aldolase 1 OS=Caenorhabditis... [more]
ALDOC_MACFA3.843e-3553.96Fructose-bisphosphate aldolase C OS=Macaca fascicu... [more]
ALDOC_HUMAN5.019e-3553.96Fructose-bisphosphate aldolase C OS=Homo sapiens G... [more]
ALDOA_RAT5.019e-3556.12Fructose-bisphosphate aldolase A OS=Rattus norvegi... [more]
ALF_DICDI8.562e-3556.83Fructose-bisphosphate aldolase OS=Dictyostelium di... [more]
ALF_DROME1.460e-3457.55Fructose-bisphosphate aldolase OS=Drosophila melan... [more]
ALF_ECHMU1.907e-3457.55Fructose-bisphosphate aldolase OS=Echinococcus mul... [more]
ALFC1_ARATH3.253e-3455.40Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALDOB_SPAAU3.253e-3452.52Fructose-bisphosphate aldolase B OS=Sparus aurata ... [more]
ALDOA_RABIT4.249e-3455.40Fructose-bisphosphate aldolase A OS=Oryctolagus cu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS06_0001P18_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001P18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189512 ID=CN189512; Name=CN189512; organism=Citrus sinensis; type=EST; length=714bp
TTTTTTTTTTTTTGCAATAAGCACAAGAAAACATTATCAATTATGTGCCT
AAATCACAGAAATTTAGTGCCATTAGGGGAAAGGAAAAAAAAAGAAAAAC
AAAAACAAAAGCATAAACAGTTTTCAGTTTAGTTTTGATCAAAACCACTC
AAACCGAAGTTCCCAAGCTTTTTATTGCTCCACCTAAATATGAAAAAGCT
CTAAAACTATGAATGAGAATGGGCCAACCTAATGTTCATACCGCCATTTA
CTCTCATAAAGTTCATAAAGCACAACACCCAAAGCTTCAACTGTGCTTAG
TATTTGTAGTCCTTGACATGGAGAGACTCTGCGGCACCTTCACCAAGCTG
GGCATCACCCTTGTAAGTACCGAGGGTAGCCTCAGAGTTGGCCTTGCACC
TGACAAGGAAAGCAGCCTGGGCCTTCTGCACATTCTCTTCCTTTCCAGCC
CATGCCTTGAGAGTGCTCTGCTGAAGTGCACGTCCAAAGGAGAAGGAAAG
TGACCATGGCTTCTTCGTCTTGAGCTGGTTCATGGCATTAAGGTTGCGGG
TAGCCTCCTCCTCACTCTGCCCACCAGACAAGAACACAACAGCAGGAACT
GCTGCAGGCATAGTGCGTTGCAGGGCCCGGACAGTGTGTTCAGCAATCAC
GTCCGGTGTAACTTTGGGAGCTTCAGATCCAGGGGTCACCATGTTGGGCT
TCAAAAGGGTACCC
back to top