CN189509
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189509 vs. ExPASy Swiss-Prot
Match: UBC12_BOVIN (NEDD8-conjugating enzyme Ubc12 OS=Bos taurus GN=UBE2M PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.847e-18 Identity = 46/138 (33.33%), Postives = 77/138 (55.80%), Query Frame = 1 Query: 190 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTAR 603 A RI K++ +L P T + +D+ +++ I P + Y G F+ + YP PPKV T V+HPNI+ G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A + ++++ +E + Sbjct: 30 AQLRIQKDINELNL-PKTCDISFSDPDDLLNFKLVIC-PDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQ 165
BLAST of CN189509 vs. ExPASy Swiss-Prot
Match: UBC8_SCHPO (Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe GN=ubc8 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.974e-18 Identity = 42/123 (34.15%), Postives = 71/123 (57.72%), Query Frame = 1 Query: 262 VAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVL-LSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 624 V ++M + GPS++PY+GG++ V + P +YP+K P + F ++FHPNI+ +GS+CLD++ + WSP + + + + LL PN DPL E A + + Y + R + +YA Sbjct: 25 VNDNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMINIFEVFLPQLLRYPNASDPLNGEAAALLLREPNTYYAKVRDYIARYA 147
BLAST of CN189509 vs. ExPASy Swiss-Prot
Match: UBC7_WHEAT (Ubiquitin-conjugating enzyme E2 7 OS=Triticum aestivum GN=UBC7 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.701e-17 Identity = 40/128 (31.25%), Postives = 72/128 (56.25%), Query Frame = 1 Query: 271 DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL------------DILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQK 618 ++F WQ TI+GP ++ Y GG F + FP +YP PP V F ++++HPN+ +G +C+ ++ E+W+P T+ ++LSI S+L+ PN + P E A ++ + +++ R +K Sbjct: 36 NVFEWQVTIIGPPETLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVCISIHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANIEAAKDWREKQDEFKKKVRRAVRK 163
BLAST of CN189509 vs. ExPASy Swiss-Prot
Match: UBE2U_HUMAN (Ubiquitin-conjugating enzyme E2 U OS=Homo sapiens GN=UBE2U PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.222e-17 Identity = 48/143 (33.57%), Postives = 83/143 (58.04%), Query Frame = 1 Query: 208 KELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSN-GSICLDIL--KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAM 627 ++ DL+++ +A PV+EDM W+ I G +S + G VF +TIHF +Y + PP V F T FHPN++ + G C+D L E+W+ T+S +LL++ +L++P ++P+ E A + D++ Y + R + + M Sbjct: 11 RDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILVKDESLYRTILRLFNRPLQM 153
BLAST of CN189509 vs. ExPASy Swiss-Prot
Match: UBE2F_CHICK (NEDD8-conjugating enzyme UBE2F OS=Gallus gallus GN=UBE2F PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.902e-17 Identity = 51/151 (33.77%), Postives = 79/151 (52.32%), Query Frame = 1 Query: 196 KRILKELKDLQKDPPTSCSAG-PVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 624 K ++KE+ +L+ + P +C P + ++Q T++ P + Y GG F I P Y PPKV T+++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL E A + DK + + + ++YA Sbjct: 35 KLLVKEVAELEANLPCTCKVNFPDPNKLHYFQLTVI-PDEGYYQGGKFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVEDYIKRYA 184
BLAST of CN189509 vs. ExPASy Swiss-Prot
Match: UB12L_ARATH (Probable NEDD8-conjugating enzyme Ubc12-like OS=Arabidopsis thaliana GN=RCE2 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.902e-17 Identity = 45/135 (33.33%), Postives = 73/135 (54.07%), Query Frame = 1 Query: 199 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTAR 603 R+ K++ +L S D+ +++ TI P + Y G F+ + YP + PKV +TKV+HPNI+ G++CL+IL+E W P L I+ V+ + L T+PN +DPL E A + + + +E R Sbjct: 35 RLHKDISELNLPKSCKISFPNGKNDLMNFEVTIK-PDEGYYLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRDNPKTFEYNVR 168
BLAST of CN189509 vs. ExPASy Swiss-Prot
Match: U2D2L_HUMAN (Putative ubiquitin-conjugating enzyme E2 D2-like protein OS=Homo sapiens GN=UBE2DNL PE=5 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.790e-17 Identity = 42/75 (56.00%), Postives = 50/75 (66.67%), Query Frame = 1 Query: 187 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFH 411 MA K I KE +L +DP CSAGPV +DM HWQATI P+DS Y GGVF + FP DY FKPPK+ F ++H Sbjct: 1 MALKLIHKEFLELARDPQPHCSAGPVWDDMLHWQATITRPNDSSYLGGVFF--LKFPSDYLFKPPKIKFTNGIYH 73
BLAST of CN189509 vs. ExPASy Swiss-Prot
Match: UBC12_SCHPO (NEDD8-conjugating enzyme ubc12 OS=Schizosaccharomyces pombe GN=ubc12 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.950e-17 Identity = 47/140 (33.57%), Postives = 74/140 (52.86%), Query Frame = 1 Query: 190 ASKRILKELKDLQKDPPTSCS-AGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARS 606 A RI K++ DL+ S S P+ ++ H + + P + Y GG F I +YP PPKV K++HPNI+ G++CL+IL++ W+P L ++ +L+ + L PN +DPL E A D + S R+ Sbjct: 24 AQIRIQKDVTDLEIPSTMSTSWPDPIKLNVLHLE---IRPDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNILRQDWNPVLNLNSILVGLQFLFLSPNAEDPLNKEAAADLHKDPQGFASRVRT 160
BLAST of CN189509 vs. ExPASy Swiss-Prot
Match: UBE2U_MACFA (Ubiquitin-conjugating enzyme E2 U OS=Macaca fascicularis GN=UBE2U PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.443e-17 Identity = 46/143 (32.17%), Postives = 83/143 (58.04%), Query Frame = 1 Query: 208 KELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSN-GSICLDIL--KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAM 627 ++ DL+++ +A PV+EDM W+ I G +S + G VF +TIHF +Y + PP V F T FHPN++ + G C+D L ++W+ T+S +LL++ +L++P ++P+ E A + D++ Y + + + + M Sbjct: 11 RDFYDLKENNYKGITARPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFVTIPFHPNVDPHTGQPCIDFLDNPKKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILTKDESLYRTILKLFNRPLQM 153
BLAST of CN189509 vs. ExPASy Swiss-Prot
Match: UBC4_MIMIV (Probable bifunctional E2/E3 enzyme R795 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R795 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.443e-17 Identity = 44/143 (30.77%), Postives = 72/143 (50.35%), Query Frame = 1 Query: 199 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAM 627 R+ +E+ D+ K+ +D+ W+ GP +PY G +L I F +YP P + F T + H NIN+ G +C IL ++P + IS +L I LL +P+ +DPL +A +Y YE+ + K+A+ Sbjct: 1137 RVQREIVDVMKNQHPDIDVYINEQDISFWKIVFKGPDSTPYKNGTWLAYIQFTEEYPNIAPNIRFVTPIKHCNINNYGRVCHSILDRNYTPNVKISLILQCIYGLLLNPDVNDPLDTNLAMIYYDANGLYEAQIIDYVNKFAL 1279 The following BLAST results are available for this feature:
BLAST of CN189509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189509 ID=CN189509; Name=CN189509; organism=Citrus sinensis; type=EST; length=729bpback to top |