CN189496
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189496 vs. ExPASy Swiss-Prot
Match: RN181_DANRE (E3 ubiquitin-protein ligase rnf181 OS=Danio rerio GN=rnf181 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.041e-12 Identity = 31/65 (47.69%), Postives = 38/65 (58.46%), Query Frame = -3 Query: 463 IESMPSIEILSGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRQELP 657 ++S+P + I C VC FE REMPCKH++H CILPWL NSCP+CR ELP Sbjct: 60 VQSLPVVIISPEQADKGVKCPVCLLEFEEQESVREMPCKHLFHTGCILPWLNKTNSCPLCRLELP 124
BLAST of CN189496 vs. ExPASy Swiss-Prot
Match: RN115_HUMAN (RING finger protein 115 OS=Homo sapiens GN=RNF115 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.360e-12 Identity = 26/64 (40.62%), Postives = 41/64 (64.06%), Query Frame = -3 Query: 466 IESMPSIEILSGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRQEL 657 I S+P++ + V C VCKE + + E R++PC H +H CI+PWL++ ++CPVCR+ L Sbjct: 209 ITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 272
BLAST of CN189496 vs. ExPASy Swiss-Prot
Match: RN115_MOUSE (RING finger protein 115 OS=Mus musculus GN=Rnf115 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.776e-12 Identity = 25/64 (39.06%), Postives = 43/64 (67.19%), Query Frame = -3 Query: 466 IESMPSIEILSGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRQEL 657 I S+P++ + V++ C VCKE + + + R++PC H +H CI+PWL++ ++CPVCR+ L Sbjct: 210 ITSLPTVTVTQEQVNTGLECPVCKEDYTVEEKVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 273
BLAST of CN189496 vs. ExPASy Swiss-Prot
Match: RN181_RAT (E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.748e-12 Identity = 32/65 (49.23%), Postives = 39/65 (60.00%), Query Frame = -3 Query: 463 IESMPSIEILSGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRQELP 657 +ES+P I S +E C VC FE EMPC H++H +CILPWL NSCP+CR ELP Sbjct: 71 VESLPRTVIRSS--KAELKCPVCLLEFEEEETVIEMPCHHLFHSNCILPWLSKTNSCPLCRHELP 133
BLAST of CN189496 vs. ExPASy Swiss-Prot
Match: RN181_MOUSE (E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.813e-12 Identity = 31/65 (47.69%), Postives = 39/65 (60.00%), Query Frame = -3 Query: 463 IESMPSIEILSGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRQELP 657 +ES+P I S ++ C VC FE EMPC H++H +CILPWL NSCP+CR ELP Sbjct: 71 VESLPRTVISSA--KADLKCPVCLLEFEAEETVIEMPCHHLFHSNCILPWLSKTNSCPLCRHELP 133
BLAST of CN189496 vs. ExPASy Swiss-Prot
Match: RN181_BOVIN (E3 ubiquitin-protein ligase RNF181 OS=Bos taurus GN=RNF181 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.503e-11 Identity = 31/65 (47.69%), Postives = 39/65 (60.00%), Query Frame = -3 Query: 463 IESMPSIEILSGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRQELP 657 +E++P I +E C VC FE A EMPC H++H +CILPWL NSCP+CR ELP Sbjct: 59 VENLPRTVIRGSQ--AELKCPVCLLEFEEEETAIEMPCHHLFHSNCILPWLSKTNSCPLCRHELP 121
BLAST of CN189496 vs. ExPASy Swiss-Prot
Match: RN181_HUMAN (E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens GN=RNF181 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.564e-11 Identity = 31/65 (47.69%), Postives = 38/65 (58.46%), Query Frame = -3 Query: 463 IESMPSIEILSGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRQELP 657 +E++P I +E C VC FE A EMPC H++H CILPWL NSCP+CR ELP Sbjct: 59 VENLPRTVIRGSQ--AELKCPVCLLEFEEEETAIEMPCHHLFHSSCILPWLSKTNSCPLCRYELP 121 The following BLAST results are available for this feature:
BLAST of CN189496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189496 ID=CN189496; Name=CN189496; organism=Citrus sinensis; type=EST; length=659bpback to top |