CN189495
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189495 vs. ExPASy Swiss-Prot
Match: RN181_MOUSE (E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.435e-11 Identity = 33/94 (35.11%), Postives = 44/94 (46.81%), Query Frame = 1 Query: 73 GFHLLLHQLSQIDLTALSRPENLPASKAXXXXXXXXXXXXGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRQELP 354 G L +++ DL + +LP A ++ C VC FE EMPC H++H +CILPWL NSCP+CR ELP Sbjct: 40 GGRSLFNRMDFEDLGLVDWEHHLPPPAAKAVVESLPRTVISSAKADLKCPVCLLEFEAEETVIEMPCHHLFHSNCILPWLSKTNSCPLCRHELP 133
BLAST of CN189495 vs. ExPASy Swiss-Prot
Match: RN181_DROME (E3 ubiquitin-protein ligase CG7694 OS=Drosophila melanogaster GN=CG7694 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.180e-11 Identity = 28/48 (58.33%), Postives = 35/48 (72.92%), Query Frame = 1 Query: 208 ECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRQEL 351 + C+VCKE E G + R +PCKH +HE+CIL WLK NSCP+CR EL Sbjct: 67 DLECSVCKEPAEEGQKYRILPCKHEFHEECILLWLKKTNSCPLCRYEL 114
BLAST of CN189495 vs. ExPASy Swiss-Prot
Match: RN181_RAT (E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.153e-11 Identity = 34/94 (36.17%), Postives = 44/94 (46.81%), Query Frame = 1 Query: 73 GFHLLLHQLSQIDLTALSRPENLPASKAXXXXXXXXXXXXGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRQELP 354 G L +++ DL + +LP A +E C VC FE EMPC H++H +CILPWL NSCP+CR ELP Sbjct: 40 GSRSLFNRMDFEDLGLVDWEHHLPPPAAKAVVESLPRTVIRSSKAELKCPVCLLEFEEEETVIEMPCHHLFHSNCILPWLSKTNSCPLCRHELP 133
BLAST of CN189495 vs. ExPASy Swiss-Prot
Match: RN181_BOVIN (E3 ubiquitin-protein ligase RNF181 OS=Bos taurus GN=RNF181 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.153e-11 Identity = 28/50 (56.00%), Postives = 33/50 (66.00%), Query Frame = 1 Query: 205 SECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRQELP 354 +E C VC FE A EMPC H++H +CILPWL NSCP+CR ELP Sbjct: 72 AELKCPVCLLEFEEEETAIEMPCHHLFHSNCILPWLSKTNSCPLCRHELP 121
BLAST of CN189495 vs. ExPASy Swiss-Prot
Match: RN181_HUMAN (E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens GN=RNF181 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.084e-11 Identity = 28/50 (56.00%), Postives = 32/50 (64.00%), Query Frame = 1 Query: 205 SECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRQELP 354 +E C VC FE A EMPC H++H CILPWL NSCP+CR ELP Sbjct: 72 AELKCPVCLLEFEEEETAIEMPCHHLFHSSCILPWLSKTNSCPLCRYELP 121 The following BLAST results are available for this feature:
BLAST of CN189495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189495 ID=CN189495; Name=CN189495; organism=Citrus sinensis; type=EST; length=738bpback to top |