EY676453

Overview
NameEY676453
Unique NameEY676453
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY676453 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.096e-13
Identity = 40/83 (48.19%), Postives = 54/83 (65.06%), Query Frame = 2
Query:  197 FLEDFKVTWSDAHLMQIEGGRAIQLVLDQNSRCGFASKKKYLFGRVIMNIKLVPGDSAGTVTAFYMNSKHRK*CRTNLNFDFL 445
            F  ++  TW+  H+  + GG  IQL LD+ +  GF SK  YLFG   M IKLVPGDSAGTVTAFY++S + +     ++F+FL
Sbjct:   31 FGRNYVPTWAFDHIKYLNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMYIKLVPGDSAGTVTAFYLSSTNAE--HDEIDFEFL 111          
BLAST of EY676453 vs. ExPASy Swiss-Prot
Match: XTH22_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.365e-13
Identity = 38/85 (44.71%), Postives = 49/85 (57.65%), Query Frame = 2
Query:  146 LLYCLVSCSCVSGQPATFLEDFKVTWSDAHLMQIEGGRAIQLVLDQNSRCGFASKKKYLFGRVIMNIKLVPGDSAGTVTAFYMNS 400
            LL   +S    S   A F  D ++TW D        G  + L LD++S  GF SK +YLFG+V M +KLVPG+SAGTVT  Y+ S
Sbjct:    6 LLPLFLSLIITSSVSANFQRDVEITWGDGRGQIKNNGELLTLSLDKSSGSGFQSKNEYLFGKVSMQMKLVPGNSAGTVTTLYLKS 90          

HSP 2 Score: 23.8682 bits (50), Expect = 2.365e-13
Identity = 14/53 (26.42%), Postives = 27/53 (50.94%), Query Frame = 1
Query:  400 QTPKMMQNKLEF*FPGEPNGST*AGSKTKSYAKWKKANKNREWNPWFDPA*NY 558
            ++P    ++++F F G  +G       T  Y + K  +K +++  WFDP  N+
Sbjct:   89 KSPGTTWDEIDFEFLGNSSGEPYT-LHTNVYTQGK-GDKEQQFKLWFDPTANF 139          
BLAST of EY676453 vs. ExPASy Swiss-Prot
Match: XTH25_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.738e-13
Identity = 35/70 (50.00%), Postives = 48/70 (68.57%), Query Frame = 2
Query:  194 TFLEDFKVTWSDAHLMQIEGGRAIQLVLDQNSRCGFASKKKYLFGRVIMNIKLVPGDSAGTVTAFYMNSK 403
            TF  +F +TW D     +  G  + L LD+ S  GF +KK+YLFG++ M +KLVPG+SAGTVTA+Y+ SK
Sbjct:   29 TFDTEFDITWGDGRGKVLNNGELLTLSLDRASGSGFQTKKEYLFGKIDMQLKLVPGNSAGTVTAYYLKSK 98          
BLAST of EY676453 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.576e-13
Identity = 44/108 (40.74%), Postives = 63/108 (58.33%), Query Frame = 2
Query:  134 TLFVLLYCLVSCSCVSGQ----PATFLEDFKVTWSDAHLMQIEGGRAIQLVLDQNSRCGFASKKKYLFGRVIMNIKLVPGDSAGTVTAFYMNSKHRK*CRTNLNFDFL 445
            T+ V+L  L S +  +         F  ++  TW+  H+    GG  IQL LD+ +  GF SK  YLFG   M IK+VPGDSAGTVTAFY++S++ +     ++F+FL
Sbjct:    8 TVCVILASLASAALCANPRRPVDVQFGRNYVPTWAFDHIKYFNGGSDIQLHLDKYTGTGFQSKGSYLFGHFSMYIKMVPGDSAGTVTAFYLSSQNAE--HDEIDFEFL 113          
BLAST of EY676453 vs. ExPASy Swiss-Prot
Match: XTH13_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis thaliana GN=XTH13 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.576e-13
Identity = 42/103 (40.78%), Postives = 63/103 (61.17%), Query Frame = 2
Query:  137 LFVLLYCLVSCSCVSGQPATFLEDFKVTWSDAHLMQIEGGRAIQLVLDQNSRCGFASKKKYLFGRVIMNIKLVPGDSAGTVTAFYMNSKHRK*CRTNLNFDFL 445
            L + L  L+S S  S     F ++F +TW +     +E G+ +   LD+ S  GF SKK+YLFG++ M +KLV G+SAGTVTA+Y++SK        ++F+FL
Sbjct:   11 LLLSLLLLISLSAGS-----FYDNFDITWGNGRANIVESGQLLTCTLDKISGSGFQSKKEYLFGKIDMKMKLVAGNSAGTVTAYYLSSKGE--TWDEIDFEFL 106          
BLAST of EY676453 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.986e-13
Identity = 37/83 (44.58%), Postives = 55/83 (66.27%), Query Frame = 2
Query:  197 FLEDFKVTWSDAHLMQIEGGRAIQLVLDQNSRCGFASKKKYLFGRVIMNIKLVPGDSAGTVTAFYMNSKHRK*CRTNLNFDFL 445
            F  ++  TW+  H+  + GG  + LVLD+ +  GF SK  YLFG   M+IK+V GDSAGTVTAFY++S++ +     ++F+FL
Sbjct:   32 FGRNYFPTWAFDHIKYLNGGSEVHLVLDKYTGTGFQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYLSSQNSE--HDEIDFEFL 112          

HSP 2 Score: 21.557 bits (44), Expect = 3.986e-13
Identity = 7/16 (43.75%), Postives = 11/16 (68.75%), Query Frame = 1
Query:  511 NKNREWNPWFDPA*NY 558
            N+ +  N WFDP+ +Y
Sbjct:  133 NREQRINLWFDPSKDY 148          
BLAST of EY676453 vs. ExPASy Swiss-Prot
Match: XTHB_PHAAN (Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.671e-13
Identity = 44/110 (40.00%), Postives = 62/110 (56.36%), Query Frame = 2
Query:  143 VLLYCLVSCSCVSGQ---------PATFLEDFKVTWSDAHLMQIEGGRAIQLVLDQNSRCGFASKKKYLFGRVIMNIKLVPGDSAGTVTAFYMNSKHRK*CRTNLNFDFL 445
            +L+ CLV  S  S              F  ++  TW+  H+    GG  IQL LD+ +  GF +K  YLFG   MNIK+VPGDSAGTVTAF ++S++ +     ++F+FL
Sbjct:    5 LLILCLVLVSLASSALCAAPRRPVDVPFGRNYIPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQTKGSYLFGHFSMNIKMVPGDSAGTVTAFCLSSQNAE--HDEIDFEFL 112          
BLAST of EY676453 vs. ExPASy Swiss-Prot
Match: XTH21_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.100e-13
Identity = 44/99 (44.44%), Postives = 61/99 (61.62%), Query Frame = 2
Query:  107 SMAILRNAITLFVLLYCLVSCSCVSGQPATFLEDFKVTWSDAHLMQIEGGRAIQLVLDQNSRCGFASKKKYLFGRVIMNIKLVPGDSAGTVTAFYMNSK 403
            S  +L  +I+LF+ L  L+    V G+   F +D  +TW D     +  G  + L LDQ+S  GF SK +YL+G+V M IKLVPG+SAGTVT FY+ S+
Sbjct:    3 SSTLLVMSISLFLGLSILL---VVHGKD--FNQDIDITWGDGRGNILNNGTLLNLGLDQSSGSGFQSKAEYLYGKVDMQIKLVPGNSAGTVTTFYLKSQ 96          
BLAST of EY676453 vs. ExPASy Swiss-Prot
Match: XTH24_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 8.760e-13
Identity = 39/89 (43.82%), Postives = 53/89 (59.55%), Query Frame = 2
Query:  137 LFVLLYCLVSCSCVSGQPATFLEDFKVTWSDAHLMQIEGGRAIQLVLDQNSRCGFASKKKYLFGRVIMNIKLVPGDSAGTVTAFYMNSK 403
            +F     LV+   VS   A F  D  V W +     +  G+ + L LD++S  GF SK +YLFG++ M IKLVPG+SAGTVT FY+ S+
Sbjct:    6 IFFFTTLLVAAFSVSA--ADFNTDVNVAWGNGRGKILNNGQLLTLSLDKSSGSGFQSKTEYLFGKIDMQIKLVPGNSAGTVTTFYLKSE 92          

HSP 2 Score: 23.0978 bits (48), Expect = 8.760e-13
Identity = 7/18 (38.89%), Postives = 13/18 (72.22%), Query Frame = 1
Query:  505 KANKNREWNPWFDPA*NY 558
            K +K ++++ WFDP  N+
Sbjct:  123 KGDKEQQFHLWFDPTANF 140          
BLAST of EY676453 vs. ExPASy Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.359e-12
Identity = 41/105 (39.05%), Postives = 60/105 (57.14%), Query Frame = 2
Query:  137 LFVLLYCLVSCSCVSGQPATFLED-FKVTWSDAHLMQIEGGRAIQLVLDQNSRCGFASKKKYLFGRVIMNIKLVPGDSAGTVTAFYMNSKHRK*C-RTNLNFDFL 445
            LF+ +  L++ S ++  P    ED F + WS+ H    + G    L LD ++ CGF +K  Y FG   M +KLV GDSAG VTA+YM S++     R  ++F+FL
Sbjct:    4 LFLFMTALMASSSIAATPTQSFEDNFNIMWSENHFTTSDDGEIWNLSLDNDTGCGFQTKHMYRFGWFSMKLKLVGGDSAGVVTAYYMCSENGAGPERDEIDFEFL 108          
The following BLAST results are available for this feature:
BLAST of EY676453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
XTHA_PHAAN2.096e-1348.19Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH22_ARATH2.365e-1344.71Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH25_ARATH2.738e-1350.00Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_SOYBN3.576e-1340.74Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH13_ARATH3.576e-1340.78Putative xyloglucan endotransglucosylase/hydrolase... [more]
XTH5_ARATH3.986e-1344.58Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHB_PHAAN4.671e-1340.00Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH21_ARATH6.100e-1344.44Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH24_ARATH8.760e-1343.82Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH8_ARATH1.359e-1239.05Probable xyloglucan endotransglucosylase/hydrolase... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-022-H02-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY676453 ID=EY676453; Name=EY676453; organism=Citrus sinensis; type=EST; length=900bp
CGGGTTCCCGGGTCCCGGGATTCCCGGGGTCGACCCACGCATCCGAATTA
AAGTTCTCTCTCCCCCTTAATAACAGATAATATTTTATTGTACAGCTTGT
TTTCCCTCTATGGCTATCCTAAGAAATGCAATAACATTATTTGTGTTGCT
TTACTGTCTTGTATCCTGCTCTTGCGTTTCAGGGCAACCGGCTACTTTTC
TTGAGGATTTTAAAGTCACATGGTCCGATGCCCATCTCATGCAAATCGAG
GGAGGGAGGGCCATCCAGCTAGTTCTAGACCAAAATTCAAGATGTGGGTT
TGCTTCCAAAAAGAAATACTTGTTCGGGCGTGTAATCATGAATATCAAGC
TCGTTCCTGGAGACTCTGCTGGAACTGTCACTGCATTTTATATGAATTCC
AAACACCGAAAATGATGCAGAACAAACTTGAATTTTGATTTCCTGGAGAA
CCCAACGGGTCAACCTGAGCCGGGTCCAAAACCAAATCCTATGCCAAATG
GAAAAAGGCAAATAAAAACAGAGAGTGGAACCCCTGGTTTGACCCTGCCT
GAAATTATACACTTTAACAATTTTTCTCAGGAACCATACACAAAATTAAC
TTCATAGATGAAAAAAGTGAACCACGAGGGTTATAAAAAAAAGAAAAGAA
AAGGCTCCAATTAATATAAAACACAAACAGATGGGGGAACACTAAAACTT
TTCTTCAAACAAAATCACAAAACATAAAAAAAAGTTTAAGAAAAAAAATG
AAAGAGAAGGAGAACTACAGTATTAAGAATGAAACAAAAAAAAATAAATG
AAATAGAGTGTTCACCGCCCTGACGATAAGAGCGCAAGCCAAATCACCGC
CAGTTGCAACAGTTGGGAATAACCACTTCTGAATCCTCCCTCACCTAATC
back to top