CN189467
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC_CAPAN (Superoxide dismutase [Cu-Zn] OS=Capsicum annuum GN=SODCC PE=2 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 4.674e-65 Identity = 118/152 (77.63%), Postives = 129/152 (84.87%), Query Frame = -2 Query: 191 MVKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 646 MVKAVAVL +E V GT+ FSQ+GD PTTV+G++SGLKPG HGFHVHALGDTTNGCMSTGPH+NPAGKEHG PEDENRHA GTA+FT+ D QIPL+GP SIIGR VVVHADPDDLGKGGHEL+KTTGNAGGRVACGIIGLQG Sbjct: 1 MVKAVAVLSSSECVSGTILFSQDGDAPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDENRHAGDLGNITVGEDGTASFTITDEQIPLTGPQSIIGRGVVVHADPDDLGKGGHELTKTTGNAGGRVACGIIGLQG 152
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC2_ORYSJ (Superoxide dismutase [Cu-Zn] 2 OS=Oryza sativa subsp. japonica GN=SODCC2 PE=1 SV=2) HSP 1 Score: 247.669 bits (631), Expect = 4.674e-65 Identity = 120/152 (78.95%), Postives = 129/152 (84.87%), Query Frame = -2 Query: 191 MVKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 646 MVKAVAVL +EGVKGT+ FSQEGDGPT+V+GS+SGLKPG HGFHVHALGDTTNGCMSTGPHFNP GKEHG P+DENRHA G A V D+QIPL+G +SIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG Sbjct: 1 MVKAVAVLASSEGVKGTIFFSQEGDGPTSVTGSVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPTGKEHGAPQDENRHAGDLGNITAGADGVANVNVSDSQIPLTGAHSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 152
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC_ZANAE (Superoxide dismutase [Cu-Zn] OS=Zantedeschia aethiopica GN=SODCC PE=2 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 7.973e-65 Identity = 118/151 (78.15%), Postives = 130/151 (86.09%), Query Frame = -2 Query: 194 MVKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQ 646 MVKAVAVL G+EGV+GTV F+QEG+GPTT++GSLSGLKPG HGFHVHALGDTTNGCMSTGPHFNPAGKEHG PED NRHA GT FTV D+QIPL+G NS++GRAVVVHAD DDLGKGGHELSKTTGNAGGR+ACG+IGLQ Sbjct: 1 MVKAVAVLTGSEGVQGTVFFAQEGEGPTTITGSLSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDGNRHAGDLGNVTVGEDGTVNFTVTDSQIPLTGLNSVVGRAVVVHADSDDLGKGGHELSKTTGNAGGRLACGVIGLQ 151
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC_CARPA (Superoxide dismutase [Cu-Zn] OS=Carica papaya GN=SODCC PE=2 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.360e-64 Identity = 115/152 (75.66%), Postives = 129/152 (84.87%), Query Frame = -2 Query: 191 MVKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 646 MVKAVAVL +EGV GT+ F+Q DGPTTV+G +SGLKPG HGFHVHALGDTTNGCMSTGPHFNPAGKEHG PED+ RHA G +F+++D+QIPL+GPNSI+GRAVVVHADPDDLGKGGHELSKTTGNAGGRVACG+IGLQG Sbjct: 1 MVKAVAVLSSSEGVSGTIFFTQAADGPTTVTGEISGLKPGHHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDIRHAGDLGNVNVGDDGKVSFSIIDSQIPLTGPNSIVGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGVIGLQG 152
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC2_MAIZE (Superoxide dismutase [Cu-Zn] 2 OS=Zea mays GN=SODCC.1 PE=2 SV=2) HSP 1 Score: 244.973 bits (624), Expect = 3.030e-64 Identity = 119/152 (78.29%), Postives = 129/152 (84.87%), Query Frame = -2 Query: 191 MVKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 646 MVKAVAVL GT+ VKGT+ FSQEGDGPTTV+GS+SGLKPG HGFHVHALGDTTNGCMSTGPHFNP GKEHG PEDE+RHA G + D+QIPL+GP+SIIGRAVVVHADPDDLGKGGHELSK+TGNAGGRVACGIIGLQG Sbjct: 1 MVKAVAVLAGTD-VKGTIFFSQEGDGPTTVTGSISGLKPGLHGFHVHALGDTTNGCMSTGPHFNPVGKEHGAPEDEDRHAGDLGNVTAGEDGVVNVNITDSQIPLAGPHSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGLQG 151
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC2_SOLLC (Superoxide dismutase [Cu-Zn] 2 OS=Solanum lycopersicum GN=SODCC.5 PE=3 SV=3) HSP 1 Score: 244.588 bits (623), Expect = 3.957e-64 Identity = 116/152 (76.32%), Postives = 129/152 (84.87%), Query Frame = -2 Query: 191 MVKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 646 MVKAVAVL +EGV GT+ F+Q+G PTTV+G++SGLKPG HGFHVHALGDTTNGCMSTGPH+NPAGKEHG PEDE RHA GTA+FT+ D QIPL+GP SIIGRAVVVHADPDDLGKGGHELSK+TGNAGGR+ACGIIGLQG Sbjct: 1 MVKAVAVLNSSEGVSGTILFTQDGAAPTTVNGNISGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTITDKQIPLTGPQSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRIACGIIGLQG 152
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC_SOYBN (Superoxide dismutase [Cu-Zn] OS=Glycine max GN=SOD1 PE=3 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 5.168e-64 Identity = 117/152 (76.97%), Postives = 129/152 (84.87%), Query Frame = -2 Query: 191 MVKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 646 MVKAVAVLG +EGV GT+ F+QEG+GPTTV+GSL+GLKPG HGFHVHALGDTTNGC+STG HFNP EHG PEDENRHA GT +F++ D+QIPL+GPNSIIGRAVVVHAD DDLGKGGHELSKTTGNAGGRVACGIIGLQG Sbjct: 1 MVKAVAVLGSSEGVTGTIFFTQEGNGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGAHFNPNNNEHGAPEDENRHAGDLGNVNVGDDGTVSFSITDSQIPLTGPNSIIGRAVVVHADSDDLGKGGHELSKTTGNAGGRVACGIIGLQG 152
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC_PEA (Superoxide dismutase [Cu-Zn] OS=Pisum sativum GN=SODCC PE=2 SV=2) HSP 1 Score: 244.202 bits (622), Expect = 5.168e-64 Identity = 116/152 (76.32%), Postives = 128/152 (84.21%), Query Frame = -2 Query: 191 MVKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 646 MVKAVAVL + V GT++FSQEG+GPTTV+G+L+GLKPG HGFH+HALGDTTNGC+STGPHFNP GKEHG PEDE RHA GT +FT+ DN IPL+G NSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG Sbjct: 1 MVKAVAVLSNSNEVSGTINFSQEGNGPTTVTGTLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGAPEDETRHAGDLGNINVGDDGTVSFTITDNHIPLTGTNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 152
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC_SOLCS (Superoxide dismutase [Cu-Zn] OS=Solidago canadensis var. scabra GN=SODCC PE=2 SV=3) HSP 1 Score: 243.432 bits (620), Expect = 8.815e-64 Identity = 119/153 (77.78%), Postives = 128/153 (83.66%), Query Frame = -2 Query: 191 MVKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 646 MVKAVAVL +EGV GT+ FSQE +G PTTV+G LSGLKPGPHGFHVHALGDTTNGCMSTGPH+NP GK+HG P+DE+RHA GTA FT+VD QIPL G SIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG Sbjct: 1 MVKAVAVLSSSEGVSGTIFFSQEAEGAPTTVTGDLSGLKPGPHGFHVHALGDTTNGCMSTGPHYNPHGKDHGAPDDEHRHAGDLGNVTVGEDGTAKFTIVDKQIPLIGAQSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 153
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC_ARATH (Superoxide dismutase [Cu-Zn] OS=Arabidopsis thaliana GN=SODCC PE=1 SV=2) HSP 1 Score: 242.276 bits (617), Expect = 1.964e-63 Identity = 117/152 (76.97%), Postives = 125/152 (82.24%), Query Frame = -2 Query: 191 MVKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 646 M K VAVL +EGV GT+ F+QEGDG TTVSG++SGLKPG HGFHVHALGDTTNGCMSTGPHFNP GK HG PED NRHA GTATFT+ D QIPL+GPNSI+GRAVVVHADPDDLGKGGHELS TGNAGGRVACGIIGLQG Sbjct: 1 MAKGVAVLNSSEGVTGTIFFTQEGDGVTTVSGTVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPDGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDCQIPLTGPNSIVGRAVVVHADPDDLGKGGHELSLATGNAGGRVACGIIGLQG 152 The following BLAST results are available for this feature:
BLAST of CN189467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189467 ID=CN189467; Name=CN189467; organism=Citrus sinensis; type=EST; length=710bpback to top |