CN189467
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODE_CAEEL (Extracellular superoxide dismutase [Cu-Zn] OS=Caenorhabditis elegans GN=sod-4 PE=1 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.162e-31 Identity = 74/156 (47.44%), Postives = 94/156 (60.26%), Query Frame = -2 Query: 200 VLRSHSTMVKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIG 667 V+R+ + + KA A TE + GT+ F Q G ++GS+SGL G HGFH+H GDT NGC+S G H+NP HG P+D NRH G +V D+ LSG SIIGR+VV+H DDLG+G + SKTTGNAG R+ACG IG Sbjct: 21 VIRARAYIFKAEAGKIPTELI-GTIDFDQSGSF-LKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHGAPDDSNRHIGDLGNIESPASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRGTSDQSKTTGNAGSRLACGTIG 174
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC_NPVOP (Putative superoxide dismutase [Cu-Zn] OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=SOD PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.518e-31 Identity = 71/151 (47.02%), Postives = 89/151 (58.94%), Query Frame = -2 Query: 197 VKAVAVLGGTEGVKGTVSFSQEG-DGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTAT-FTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 643 +KA+ ++ G G + F Q D P +++G L L G HGFHVH GDT+NGC S G HFNP + HG P+ RH T + DN I L GP SI+GR++VVH D DDLG G H LSKTTGN+GGR+ CGIIG+ Sbjct: 1 MKAICIVAGE--ASGRIYFKQGAPDEPVSITGYLLNLPRGLHGFHVHEFGDTSNGCTSAGEHFNPTRQRHGAPDAAERHVGDLGNVRSAGCTALTAIHMSDNVITLFGPLSILGRSLVVHTDRDDLGLGEHPLSKTTGNSGGRLGCGIIGV 149
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: CCS_HUMAN (Copper chaperone for superoxide dismutase OS=Homo sapiens GN=CCS PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.738e-30 Identity = 67/145 (46.21%), Postives = 86/145 (59.31%), Query Frame = -2 Query: 203 AVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGII 637 AVA+LGG V+G V F Q + G++ GL+PG HG HVH GD TN C S G HFNP G HG P+D +RH G A F + D Q+ + +IGR++++ DDLG+GGH LSK TGN+G R+ACGII Sbjct: 89 AVAILGGPGTVQGVVRFLQLTPERCLIEGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNHFNPDGASHGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQLKVW---DVIGRSLIIDEGEDDLGRGGHPLSKITGNSGERLACGII 230
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: CCS_RAT (Copper chaperone for superoxide dismutase OS=Rattus norvegicus GN=Ccs PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.882e-30 Identity = 67/145 (46.21%), Postives = 86/145 (59.31%), Query Frame = -2 Query: 203 AVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGII 637 AVA++ G+ V+G V F Q + G++ GL+PG HG HVH GD T C S G HFNP G HG P+D +RH G ATF + D Q+ + +IGR++VV DDLG+GGH LSK TGN+G R+ACGII Sbjct: 89 AVAIMEGSGTVQGVVRFLQLSSELCLIEGTIDGLEPGLHGLHVHQYGDLTKDCSSCGDHFNPDGASHGGPQDTDRHRGDLGNVHAEASGRATFRIEDKQLKVW---DVIGRSLVVDEGEDDLGRGGHPLSKVTGNSGKRLACGII 230
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODE_DIRIM (Extracellular superoxide dismutase [Cu-Zn] OS=Dirofilaria immitis PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.327e-30 Identity = 70/152 (46.05%), Postives = 89/152 (58.55%), Query Frame = -2 Query: 197 KAVAVLGGTEGVKGTVSFSQEGDGP-TTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKG---GHELSKTTGNAGGRVACGIIGL 640 KAVAVL ++ V G + F Q TT+ G+++GL PG HGFH+H G NGC S H+NP K HG P + +H G A ++ N I LSGP S+IGR++VVHA+PDDLGKG E S TGNAG R+ C IIG+ Sbjct: 41 KAVAVLK-SDTVNGIIYFQQNNRASATTIYGTINGLTPGLHGFHIHQYGIKANGCTSAAAHYNPFEKTHGRPTNNIKHIGDLRNIKAGADGVANVNIISNHIQLSGPLSVIGRSLVVHANPDDLGKGNGDAREESLKTGNAGSRIVCSIIGI 191
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: CCS_PIG (Copper chaperone for superoxide dismutase OS=Sus scrofa GN=CCS PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.327e-30 Identity = 67/145 (46.21%), Postives = 85/145 (58.62%), Query Frame = -2 Query: 203 AVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGII 637 AVA+LGG+ V+G V F Q + G++ GLKPG HG HVH GD T C S G HFNP G HG P+D +RH G A F + D + + +IGR++V+ DDLG+GGH LSK TGN+G R+ACGII Sbjct: 89 AVAILGGSGPVQGVVRFLQLTPERCLIEGTIDGLKPGLHGLHVHQFGDLTRNCNSCGDHFNPDGMSHGGPQDSDRHRGDLGNVCADADGRAVFRMEDELLKVW---DVIGRSLVIDEGEDDLGRGGHPLSKITGNSGERLACGII 230
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: CCS_MOUSE (Copper chaperone for superoxide dismutase OS=Mus musculus GN=Ccs PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.327e-30 Identity = 66/145 (45.52%), Postives = 85/145 (58.62%), Query Frame = -2 Query: 203 AVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGII 637 AVA+L G ++G V F Q + G++ GL+PG HG HVH GD T C S G HFNP G HG P+D +RH G ATF + D Q+ + +IGR++V+ DDLG+GGH LSK TGN+G R+ACGII Sbjct: 89 AVAILEGCGSIQGVVRFLQLSSELCLIEGTIDGLEPGLHGLHVHQYGDLTRDCNSCGDHFNPDGASHGGPQDTDRHRGDLGNVRAEAGGRATFRIEDKQLKVW---DVIGRSLVIDEGEDDLGRGGHPLSKITGNSGKRLACGII 230
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC_PBCV1 (Superoxide dismutase [Cu-Zn] OS=Paramecium bursaria Chlorella virus 1 GN=A245R PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.088e-29 Identity = 73/149 (48.99%), Postives = 88/149 (59.06%), Query Frame = -2 Query: 200 VKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPG-PHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIG 643 V A+AVL G VKGTV F +E +S +SGLKP HGFHVH GD T+GC S HFNP G HG P+ + RH G A ++ D+ I L G +IIGRA+VVHAD DDLG GG+ S TGNAG R+ C +IG Sbjct: 35 VSAIAVLEGP--VKGTVRFVEESS-KVKISVDISGLKPNRKHGFHVHEAGDLTDGCTSACAHFNPFGTAHGGPDSKIRHVGDLGNILADKNGKAKYSFYDSMIKLRGKCNIIGRAIVVHADTDDLGLGGNAESLKTGNAGKRIGCAVIG 180
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC_SCHPO (Superoxide dismutase [Cu-Zn] OS=Schizosaccharomyces pombe GN=sod1 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.050e-29 Identity = 73/152 (48.03%), Postives = 84/152 (55.26%), Query Frame = -2 Query: 197 MVKAVAVLGGTEGVKGTVSFSQ-EGDGPTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 646 MV+AVAVL G V G V+F Q + + +V L G GFH+H GD TNGC S GPHFNP GK HG RH G T D+ I L G NSIIGR +V+HA DDLGKG E S TGNAG R ACG+IG+ Sbjct: 1 MVRAVAVLRGDSKVSGVVTFEQVDQNSQVSVIVDLVGNDANAKRGFHIHQFGDNTNGCTSAGPHFNPEGKTHGDRTAAVRHVGDLGNLESDAQGNIKTTFSDSVISLFGANSIIGRTIVIHAGEDDLGKGTSEESLKTGNAGARNACGVIGI 152
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC_LAMCR (Superoxide dismutase [Cu-Zn] (Fragment) OS=Lampanyctus crocodilus GN=sod1 PE=1 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.470e-26 Identity = 68/146 (46.58%), Postives = 81/146 (55.48%), Query Frame = -2 Query: 215 MVKAVAVLGGTEG-VKGTVSFSQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVA 646 MVKAV VL GT G V GTV F QE D P ++G + GL PG HGFHVHA GD TN H P D++RH A + D + L+GP SIIGR +V+H DDLGKGG++ S TGNAGGR+A Sbjct: 1 MVKAVCVLKGTTGEVTGTVYFEQESDSAPVKLTGQIIGLAPGLHGFHVHAFGDNTNXXXXXXXXXXXXXXTHAGPTDKDRHVGDLGN-------VAKIDITDKMLTLNGPLSIIGRTMVIHEKADDLGKGGNDESLKTGNAGGRMA 139 The following BLAST results are available for this feature:
BLAST of CN189467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189467 ID=CN189467; Name=CN189467; organism=Citrus sinensis; type=EST; length=710bpback to top |