CN189467
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC_CHICK (Superoxide dismutase [Cu-Zn] OS=Gallus gallus GN=SOD1 PE=1 SV=3) HSP 1 Score: 159.844 bits (403), Expect = 1.282e-38 Identity = 77/149 (51.68%), Postives = 97/149 (65.10%), Query Frame = -2 Query: 197 VKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 643 +KAV V+ G V+G + F Q+G GP V+G ++GL G HGFHVH GD TNGC S G HFNP GK+HG P+D +RH G A + D+ I L+GP+ IIGR +VVHA DDLG+GG SK TGNAG R+ACG+IG+ Sbjct: 4 LKAVCVMKGDAPVEGVIHFQQQGSGPVKVTGKITGLSDGDHGFHVHEFGDNTNGCTSAGAHFNPEGKQHGGPKDADRHV-GDLGNVTAKGGVAEVEIEDSVISLTGPHCIIGRTMVVHAKSDDLGRGGDNESKLTGNAGPRLACGVIGI 151
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC_BRUPA (Superoxide dismutase [Cu-Zn] OS=Brugia pahangi GN=SODC PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.674e-38 Identity = 83/150 (55.33%), Postives = 97/150 (64.67%), Query Frame = -2 Query: 197 VAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKG---GHELSKTTGNAGGRVACGIIGL 634 +AVL G + V G + F QE +G PTT+SG + GL PG HGFHVH GDTTNGC+S GPHFNP K HG P DE RH GTA + D + L GPNSIIGR++VVHAD DDLGKG + S TGNAG RVACGI+ + Sbjct: 6 IAVLRG-DNVSGIIRFKQEKEGSPTTISGEIKGLTPGLHGFHVHQYGDTTNGCISAGPHFNPYNKTHGGPTDEMRHVGDLGNIVAGADGTAHIDISDKHVQLLGPNSIIGRSLVVHADQDDLGKGVGDKKDESLKTGNAGARVACGIVAV 154
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC_BOVIN (Superoxide dismutase [Cu-Zn] OS=Bos taurus GN=SOD1 PE=1 SV=2) HSP 1 Score: 159.458 bits (402), Expect = 1.674e-38 Identity = 80/148 (54.05%), Postives = 95/148 (64.19%), Query Frame = -2 Query: 197 KAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 640 KAV VL G V+GT+ F +GD V+GS++GL G HGFHVH GD T GC S GPHFNP K+HG P+DE RH G A +VD I LSG SIIGR +VVH PDDLG+GG+E S TGNAG R+ACG+IG+ Sbjct: 4 KAVCVLKGDGPVQGTIHFEAKGD-TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGSRLACGVIGI 150
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC_ASHGO (Superoxide dismutase [Cu-Zn] OS=Ashbya gossypii GN=SOD1 PE=3 SV=3) HSP 1 Score: 159.458 bits (402), Expect = 1.674e-38 Identity = 83/152 (54.61%), Postives = 97/152 (63.82%), Query Frame = -2 Query: 197 MVKAVAVLGGTEGVKGTVSFSQEGDGP-TTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 646 MVKAVAVL G GV G V F QE D TT+S +++G +P HGFH+H GD TNGC S+G HFNP K HG PEDENRH G A + D I + GP SI+GR VVVHA DDLG+GG+E S TGNAG R ACG+IG+ Sbjct: 1 MVKAVAVLKGDAGVSGVVHFEQEADAAVTTISWNITGFEPNTEHGFHIHEFGDVTNGCTSSGSHFNPFKKTHGSPEDENRHVGDMGNVLADANGVAVGSAKDPLIKIFGPTSILGRTVVVHAGKDDLGRGGNEESLKTGNAGPRPACGVIGI 152
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODE_BRUPA (Extracellular superoxide dismutase [Cu-Zn] OS=Brugia pahangi PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.186e-38 Identity = 83/161 (51.55%), Postives = 101/161 (62.73%), Query Frame = -2 Query: 197 VLRSHSTMVKAVAVLGGTEG-VKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKG---GHELSKTTGNAGGRVACGIIGL 667 + R+ + A+AVL G + GT+ F Q+ + TT+SG + GL PG HGFHVH GDTTNGC+S GPHFNP K HG P DE RH GTA + D + L GPNSIIGR++VVHAD DDLGKG + S TGNAGGRVACGI+ + Sbjct: 38 IRRTITKTATAIAVLHSDNGNINGTIHFQQDKNS-TTISGEIKGLTPGLHGFHVHQYGDTTNGCISAGPHFNPYNKTHGDPTDEMRHVGDLGNIVAGADGTAHIDISDKHVQLLGPNSIIGRSLVVHADQDDLGKGVGDKKDESLKTGNAGGRVACGIVAI 197
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC_CANFA (Superoxide dismutase [Cu-Zn] OS=Canis familiaris GN=SOD1 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.186e-38 Identity = 78/149 (52.35%), Postives = 96/149 (64.43%), Query Frame = -2 Query: 197 VKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 643 +KAV VL G V+GT+ F Q+G GP VSG+++GL G HGFHVH D T GC S GPHFNP K+HG P+D+ RH G A ++ D+ I LSG SIIGR +VVH DDLGKG +E S TGNAG R+ACG+IG+ Sbjct: 3 MKAVCVLKGQGPVEGTIHFVQKGSGPVVVSGTITGLTEGEHGFHVHQFEDXTQGCTSAGPHFNPLSKKHGGPKDQERHVGDLGNVTAGKDGVAIVSIEDSLIALSGDYSIIGRTMVVHEKRDDLGKGDNEESTQTGNAGSRLACGVIGI 151
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC_MOUSE (Superoxide dismutase [Cu-Zn] OS=Mus musculus GN=Sod1 PE=1 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 2.855e-38 Identity = 79/150 (52.67%), Postives = 95/150 (63.33%), Query Frame = -2 Query: 197 VKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 643 +KAV VL G V+GT+ F Q+ G P +SG ++GL G HGFHVH GD T GC S GPHFNP K+HG P DE RH G A ++ D I LSG +SIIGR +VVH DDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 3 MKAVCVLKGDGPVQGTIHFEQKASGEPVVLSGQITGLTEGQHGFHVHQYGDNTQGCTSAGPHFNPHSKKHGGPADEERHVGDLGNVTAGKDGVANVSIEDRVISLSGEHSIIGRTMVVHEKQDDLGKGGNEESTKTGNAGSRLACGVIGI 152
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC_CANGA (Superoxide dismutase [Cu-Zn] OS=Candida glabrata GN=SOD1 PE=3 SV=3) HSP 1 Score: 157.918 bits (398), Expect = 4.871e-38 Identity = 80/152 (52.63%), Postives = 98/152 (64.47%), Query Frame = -2 Query: 197 MVKAVAVLGGTEGVKGTVSFSQEGD-GPTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 646 MVKAVAVL G+ GV G V+ Q + PTT++ ++G P GFH+H GD TNGC+S GPHFNP K HG P+DENRH G A + D+ + L GP S++GR+VVVHA DDLGKGG+E S TGNAG R ACG+IGL Sbjct: 1 MVKAVAVLRGSAGVSGVVTLEQASEQDPTTITYEIAGNDPNAERGFHIHEFGDVTNGCVSAGPHFNPFKKTHGAPQDENRHVGDLGNIKTDAQGVAKGVITDSLVKLIGPTSVVGRSVVVHAGTDDLGKGGNEESLKTGNAGPRPACGVIGL 152
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC_HYLLA (Superoxide dismutase [Cu-Zn] OS=Hylobates lar GN=SOD1 PE=2 SV=3) HSP 1 Score: 157.532 bits (397), Expect = 6.361e-38 Identity = 78/150 (52.00%), Postives = 97/150 (64.67%), Query Frame = -2 Query: 197 VKAVAVLGGTEGVKGTVSFSQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 643 +KAV VL G V+G ++F Q E +GP V G ++GL G HGFHVH GD T GC S GPHFNP ++HG P+DE RH G A ++ D+ I LSG +SIIGR +VVH DDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 3 MKAVCVLKGDSPVQGIINFEQKESNGPVKVYGRITGLTEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVAKVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC_CANAL (Superoxide dismutase [Cu-Zn] OS=Candida albicans GN=SOD1 PE=3 SV=3) HSP 1 Score: 157.532 bits (397), Expect = 6.361e-38 Identity = 83/152 (54.61%), Postives = 96/152 (63.16%), Query Frame = -2 Query: 197 MVKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 646 MVKAVAV+ G V+GTV F QE + PTT+S + G P GFH+H GD TNGC S GPHFNP GK+HG PED+ RH G A T D I L G +SI+GR +VVHA DD GKGG E SKTTG+AG R ACG+IGL Sbjct: 1 MVKAVAVVRGDSKVQGTVHFEQESESAPTTISWEIEGNDPNALRGFHIHQFGDNTNGCTSAGPHFNPFGKQHGAPEDDERHVGDLGNISTDGNGVAKGTKQDLLIKLIGKDSILGRTIVVHAGTDDYGKGGFEDSKTTGHAGARPACGVIGL 152 The following BLAST results are available for this feature:
BLAST of CN189467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189467 ID=CN189467; Name=CN189467; organism=Citrus sinensis; type=EST; length=710bpback to top |