CN189467
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC_PAETN (Superoxide dismutase [Cu-Zn] OS=Paecilomyces tenuipes GN=SOD1 PE=3 SV=3) HSP 1 Score: 157.147 bits (396), Expect = 8.308e-38 Identity = 82/152 (53.95%), Postives = 97/152 (63.82%), Query Frame = -2 Query: 197 MVKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 646 MVKAV VL G V GTV+F QE + PTT++ L+G P GFH+H GD TNGC S GPHFNP GK HG P D RH G A ++ D+Q+ L GP+S+IGR VVVHA DDLGKGG+E S TGNAG R ACG+IG+ Sbjct: 1 MVKAVCVLRGDAKVGGTVTFEQESESAPTTITYDLTGNDPNAERGFHIHTFGDNTNGCTSAGPHFNPHGKTHGAPTDAARHVGDLGNVKTDAQGNAKGSIQDSQVKLIGPHSVIGRTVVVHAGTDDLGKGGNEESLKTGNAGPRPACGVIGV 152
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC_RAT (Superoxide dismutase [Cu-Zn] OS=Rattus norvegicus GN=Sod1 PE=1 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 1.085e-37 Identity = 78/150 (52.00%), Postives = 94/150 (62.67%), Query Frame = -2 Query: 197 VKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 643 +KAV VL G V+G + F Q+ G P VSG ++GL G HGFHVH GD T GC + GPHFNP K+HG P DE RH G A ++ D I LSG +SIIGR +VVH DDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 3 MKAVCVLKGDGPVQGVIHFEQKASGEPVVVSGQITGLTEGEHGFHVHQYGDNTQGCTTAGPHFNPHSKKHGGPADEERHVGDLGNVAAGKDGVANVSIEDRVISLSGEHSIIGRTMVVHEKQDDLGKGGNEESTKTGNAGSRLACGVIGI 152
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC1_DICDI (Superoxide dismutase [Cu-Zn] 1 OS=Dictyostelium discoideum GN=sodA PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.085e-37 Identity = 79/148 (53.38%), Postives = 95/148 (64.19%), Query Frame = -2 Query: 197 AVAVLGGTEGVKGTVSFSQEG-DGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 637 AV V+ G E V G V F+QE D P TV+ ++GL+ G HGFHVHA GDTTNGC+S GPHFNP GK HG P DE+RH T+ D I L G ++I+GR +VVHAD DDLGKGG S TTG AG R+ CG+IG+ Sbjct: 5 AVCVIKG-EKVNGVVKFTQENKDSPVTVNYDITGLEKGEHGFHVHAFGDTTNGCVSAGPHFNPFGKNHGAPSDEDRHVGDLGNIVADGESNTKGTISDKIISLFGEHTIVGRTMVVHADQDDLGKGGKPDSLTTGAAGARLGCGVIGV 151
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC_ONCVO (Superoxide dismutase [Cu-Zn] OS=Onchocerca volvulus GN=sod-1 PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.417e-37 Identity = 82/151 (54.30%), Postives = 98/151 (64.90%), Query Frame = -2 Query: 197 AVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKG---GHELSKTTGNAGGRVACGIIGL 637 A+AVL G + V G + F Q+ +G PTTV+G + GL PG HGFH+H GDTTNGC+S GPHFNP K HG DE RH GTA ++ D I L GPNSIIGR++VVHAD DDLGKG + S TGNAG RVACGI+ + Sbjct: 5 AIAVLRG-DTVSGIIRFKQDKEGLPTTVTGEVKGLTPGLHGFHIHQYGDTTNGCISAGPHFNPYNKTHGDRTDEIRHVGDLGNIEAGADGTAHISISDQHIQLLGPNSIIGRSIVVHADQDDLGKGVGAKKDESLKTGNAGARVACGIVAI 154
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC_CAPHI (Superoxide dismutase [Cu-Zn] OS=Capra hircus GN=SOD1 PE=2 SV=3) HSP 1 Score: 156.377 bits (394), Expect = 1.417e-37 Identity = 79/148 (53.38%), Postives = 94/148 (63.51%), Query Frame = -2 Query: 197 KAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 640 KAV VL G V+GT+ F +GD V+GS++GL G HGFHVH GD T GC S GPHFNP K+HG P+DE RH G A +VD I LSG SIIGR +VVH PDDLG+GG+E S TGNAG +ACG+IG+ Sbjct: 4 KAVCVLKGDGPVQGTIHFEAKGD-KVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVKADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGSCLACGVIGI 150
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC_CEREL (Superoxide dismutase [Cu-Zn] OS=Cervus elaphus GN=SOD1 PE=2 SV=3) HSP 1 Score: 155.992 bits (393), Expect = 1.851e-37 Identity = 78/148 (52.70%), Postives = 95/148 (64.19%), Query Frame = -2 Query: 197 KAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 640 KAV VL G V+GT+ F +G V+GS++GL G HGFHVH GD T GC S GPHFNP K+HG P+DE RH G A +VD+ I LSG +SIIGR +VVH PDDLG+GG+E S TGNA R+ACG+IG+ Sbjct: 4 KAVCVLKGDGPVQGTIRFEAKGH-TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAKVDIVDSLISLSGEHSIIGRTMVVHEKPDDLGRGGNEESTKTGNARNRLACGVIGI 150
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC5_DICDI (Superoxide dismutase [Cu-Zn] 5 OS=Dictyostelium discoideum GN=sodE PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.851e-37 Identity = 77/150 (51.33%), Postives = 94/150 (62.67%), Query Frame = -2 Query: 197 VKAVAVLGGTEGVKGTVSFSQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 643 + A+ V+ G +GV G ++F Q + P +SG +SGLK G HGFHVH GDTTNGC+S G HFNP KEHG P DENRH + + DN I L G NSIIGR++VVH DDLG+G + SK TGNAG R+ CGII L Sbjct: 1 MSAICVIKG-DGVDGIINFKQNDNKSPVIISGVISGLKEGKHGFHVHEFGDTTNGCLSAGAHFNPFKKEHGSPNDENRHVGDLGNIESNKDKKSIINITDNIITLFGQNSIIGRSIVVHDKEDDLGRGNSQDSKITGNAGSRLGCGIIAL 149
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC_NEUCR (Superoxide dismutase [Cu-Zn] OS=Neurospora crassa GN=sod-1 PE=1 SV=3) HSP 1 Score: 155.606 bits (392), Expect = 2.417e-37 Identity = 83/152 (54.61%), Postives = 94/152 (61.84%), Query Frame = -2 Query: 197 MVKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 646 MVKAVAV+ G VKGTV F QE + PTT++ +SG P GFH+H GD TNGC S GPHFNP G HG E RH G A TV DN + L GP S+IGR VVVHA DDLGKGG+E S TGNAG R ACG+IG+ Sbjct: 1 MVKAVAVVRGDSNVKGTVIFEQESESAPTTITYDISGNDPNAKRGFHIHTFGDNTNGCTSAGPHFNPHGTTHGDRTAEVRHVGDLGNIETDAQGNAKGTVTDNLVKLIGPESVIGRTVVVHAGTDDLGKGGNEESLKTGNAGPRPACGVIGI 152
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC_CRYGA (Superoxide dismutase [Cu-Zn] OS=Cryptococcus gattii GN=SOD1 PE=2 SV=3) HSP 1 Score: 155.606 bits (392), Expect = 2.417e-37 Identity = 80/152 (52.63%), Postives = 92/152 (60.53%), Query Frame = -2 Query: 197 MVKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 646 MVKAVAVL G V G ++F+QE +G P TVSG + L GFHVH GD TNGC S GPHFNP GK HG P D RH G A+ + D + L GP SIIGR +VVHA DD GKGG+ S TGNAG R ACG+IG+ Sbjct: 1 MVKAVAVLKGDSPVTGVITFTQEKEGAPVTVSGDIKNLDANAERGFHVHEFGDNTNGCTSAGPHFNPHGKNHGAPSDSERHVGDLGNVKTDGNGVASVNISDKSLSLFGPYSIIGRTIVVHAGTDDFGKGGNAESLKTGNAGARAACGVIGI 152
BLAST of CN189467 vs. ExPASy Swiss-Prot
Match: SODC_XIPGL (Superoxide dismutase [Cu-Zn] OS=Xiphias gladius GN=sod1 PE=1 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 3.157e-37 Identity = 79/152 (51.97%), Postives = 96/152 (63.16%), Query Frame = -2 Query: 194 MVKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGS-LSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQ 646 ++KAV VL G GTV F QEG+ G L GL PG HGFHVH GD TNGC+S GPHFNPA K+H P+DE+RH G A + D +I L+GP SIIGR +V+H DDLG+GG+E S TGNAG R+ACG+IG + Sbjct: 2 VLKAVCVLRGAGETTGTVYFEQEGNANAVGKGIILKGLTPGEHGFHVHGFGDNTNGCISAGPHFNPASKKHAGPKDEDRHVGDLGNVTADANGVAKIDITD-KISLTGPYSIIGRTMVIHEKADDLGRGGNEESLKTGNAGSRLACGVIGTE 152 The following BLAST results are available for this feature:
BLAST of CN189467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189467 ID=CN189467; Name=CN189467; organism=Citrus sinensis; type=EST; length=710bpback to top |