CN189462

Overview
NameCN189462
Unique NameCN189462
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length671
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189462 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.523e-25
Identity = 59/103 (57.28%), Postives = 74/103 (71.84%), Query Frame = 2
Query:  362 QFPLFSFSSVSSATGNFSAANKLGEGGFGTVYKGVIGHG-EIAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLF 667
            + PL    +V  AT NFS+ NKLG+GGFG VYKG +  G EIAVKRL   S Q   E  NE ++IA++QH NLV++LGCCIE DE++LIYEY+ N SLD +LF
Sbjct:  512 ELPLIEMETVVKATENFSSCNKLGQGGFGIVYKGRLLDGKEIAVKRLSKTSVQGTDEFMNEVTLIARLQHINLVQVLGCCIEGDEKMLIYEYLENLSLDSYLF 614          
BLAST of CN189462 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.523e-25
Identity = 63/141 (44.68%), Postives = 86/141 (60.99%), Query Frame = 2
Query:  275 FDLGMNLKVDVELTEGNNKCKKGCEKEVDQFP--------LFSFSSVSSATGNFSAANKLGEGGFGTVYKGVIGHG-EIAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFD 670
            F  G+NL V V       + ++    E+++           F    +  AT  FS  NKLG+GGFG+VYKG++  G EIAVKRL G SGQ   E KNE  ++ ++QH+NLVKLLG C E +E +L+YE++PN SLD F+FD
Sbjct:  287 FPTGINLAVFVAFVLAYRRMRRRIYTEINKNSDSDGQATLRFDLGMILIATNEFSLENKLGQGGFGSVYKGILPSGQEIAVKRLAGGSGQGELEFKNEVLLLTRLQHRNLVKLLGFCNEGNEEILVYEHVPNSSLDHFIFD 427          
BLAST of CN189462 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 7.213e-25
Identity = 56/98 (57.14%), Postives = 75/98 (76.53%), Query Frame = 2
Query:  380 FSSVSSATGNFSAANKLGEGGFGTVYKGVIGHGE-IAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFD 670
            F ++  AT +FS  N+LGEGGFG VYKGV+ +GE IAVKRL  KSGQ   E  NE S++A++QH+NLV+LLG C++ +ER+LIYE+  N SLD ++FD
Sbjct:  334 FDTIRLATNDFSRDNQLGEGGFGAVYKGVLDYGEEIAVKRLSMKSGQGDNEFINEVSLVAKLQHRNLVRLLGFCLQGEERILIYEFFKNTSLDHYIFD 431          
BLAST of CN189462 vs. ExPASy Swiss-Prot
Match: CRK18_ARATH (Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 7.213e-25
Identity = 58/100 (58.00%), Postives = 75/100 (75.00%), Query Frame = 2
Query:  374 FSFSSVSSATGNFSAANKLGEGGFGTVYKGVIGHG-EIAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFD 670
            F   ++ SAT NFS  NKLG+GGFG VYKG++ +G EIAVKRL   SGQ   E KNE  V+A++QH NLV+LLG  ++ +E+LL+YE++ NKSLD FLFD
Sbjct:  327 FDLKTIESATSNFSERNKLGKGGFGEVYKGMLMNGTEIAVKRLSKTSGQGEVEFKNEVVVVAKLQHINLVRLLGFSLQGEEKLLVYEFVSNKSLDYFLFD 426          
BLAST of CN189462 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 7.213e-25
Identity = 57/98 (58.16%), Postives = 71/98 (72.45%), Query Frame = 2
Query:  380 FSSVSSATGNFSAANKLGEGGFGTVYKGVIGHG-EIAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFD 670
            +  + +AT  FS  NK+G+GGFG VYKG   +G E+AVKRL   SGQ   E KNE  V+A++QH+NLV+LLG  I   ER+L+YEYMPNKSLD FLFD
Sbjct:  327 YRMIRAATNKFSENNKIGQGGFGEVYKGTFSNGTEVAVKRLSKSSGQGDTEFKNEVVVVAKLQHRNLVRLLGFSIGGGERILVYEYMPNKSLDYFLFD 424          
BLAST of CN189462 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.230e-24
Identity = 53/98 (54.08%), Postives = 73/98 (74.49%), Query Frame = 2
Query:  380 FSSVSSATGNFSAANKLGEGGFGTVYKGVIGHG-EIAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFD 670
            + ++ +AT +F+ +NK+G GGFG VYKG   +G E+AVKRL   S Q   E K E  V+A++QH+NLV+LLG  ++ +ER+L+YEYMPNKSLDC LFD
Sbjct:  343 YRTIQTATNDFAESNKIGRGGFGEVYKGTFSNGKEVAVKRLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFD 440          
BLAST of CN189462 vs. ExPASy Swiss-Prot
Match: CRK6_ARATH (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.230e-24
Identity = 53/98 (54.08%), Postives = 73/98 (74.49%), Query Frame = 2
Query:  380 FSSVSSATGNFSAANKLGEGGFGTVYKGVIGHG-EIAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFD 670
            + ++ +AT +F+ +NK+G GGFG VYKG   +G E+AVKRL   S Q   E K E  V+A++QH+NLV+LLG  ++ +ER+L+YEYMPNKSLDC LFD
Sbjct:  341 YRTIQTATNDFAESNKIGRGGFGEVYKGTFSNGKEVAVKRLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFD 438          
BLAST of CN189462 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.230e-24
Identity = 57/98 (58.16%), Postives = 73/98 (74.49%), Query Frame = 2
Query:  380 FSSVSSATGNFSAANKLGEGGFGTVYKGVIGHG-EIAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFD 670
            F ++ +AT NFS  N+LG GGFG+VYKGV   G EIAVKRL   SGQ   E KNE  ++A++QH+NLV+LLG CIE  ER+L+YE++ N SLD F+FD
Sbjct:  351 FETLKAATDNFSPENELGRGGFGSVYKGVFSGGQEIAVKRLSCTSGQGDSEFKNEILLLAKLQHRNLVRLLGFCIEGQERILVYEFIKNASLDNFIFD 448          
BLAST of CN189462 vs. ExPASy Swiss-Prot
Match: CRK22_ARATH (Cysteine-rich receptor-like protein kinase 22 OS=Arabidopsis thaliana GN=CRK22 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.607e-24
Identity = 53/100 (53.00%), Postives = 75/100 (75.00%), Query Frame = 2
Query:  374 FSFSSVSSATGNFSAANKLGEGGFGTVYKGVIGHG-EIAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFD 670
            + F ++ +AT  FS +NKLGEG FG VYKG   +G E+AVKRL   SGQ+ K+ +NEA +++++QH+NL +LLG C++ D + LIYE++ NKSLD FLFD
Sbjct:  341 YEFKTIEAATNKFSKSNKLGEGRFGEVYKGKFSNGTEVAVKRLSKVSGQDTKKFRNEAVLVSKIQHRNLARLLGFCLQGDGKFLIYEFVLNKSLDYFLFD 440          
BLAST of CN189462 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.607e-24
Identity = 55/100 (55.00%), Postives = 73/100 (73.00%), Query Frame = 2
Query:  374 FSFSSVSSATGNFSAANKLGEGGFGTVYKGVIGHG-EIAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFD 670
            F F ++ +AT NF  +NKLG GGFG VYKG+  +G E+A KRL   S Q   E KNE  ++A++QHKNLV LLG  +E +E++L+YE++PNKSLD FLFD
Sbjct:  351 FDFRAIKAATSNFHKSNKLGHGGFGAVYKGMFPNGTEVAAKRLSKPSDQGEPEFKNEVLLVARLQHKNLVGLLGFSVEGEEKILVYEFVPNKSLDHFLFD 450          
The following BLAST results are available for this feature:
BLAST of CN189462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 179
Match NameE-valueIdentityDescription
SRK6_BRAOE5.523e-2557.28Putative serine/threonine-protein kinase receptor ... [more]
CRK36_ARATH5.523e-2544.68Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
CRK41_ARATH7.213e-2557.14Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
CRK18_ARATH7.213e-2558.00Cysteine-rich receptor-like protein kinase 18 OS=A... [more]
CRK15_ARATH7.213e-2558.16Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
CRK8_ARATH1.230e-2454.08Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]
CRK6_ARATH1.230e-2454.08Cysteine-rich receptor-like protein kinase 6 OS=Ar... [more]
CRK28_ARATH1.230e-2458.16Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
CRK22_ARATH1.607e-2453.00Cysteine-rich receptor-like protein kinase 22 OS=A... [more]
CRK21_ARATH1.607e-2455.00Cysteine-rich receptor-like protein kinase 21 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001O10_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001O10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189462 ID=CN189462; Name=CN189462; organism=Citrus sinensis; type=EST; length=671bp
TTTTTTTTNCATTTTCTTCAATATTAACTCTCTCTTAGTTCAGGCAAGTA
AGCATTAATTTCATCTTATCTTATTATCAATGGAACGCTGCCCAATCTTC
ATCTCAATTATTGCTTCAGTATCTCTTATCTTCTTGATCTTATCGTTCAC
TATAACCACAAATCGAACTATTTTTCTCGCCCTATCAGCTACTCTAGCTG
GACTGGCCGCCTTGGGCTTGACAATTTTTTGTTTCAGGAGAAATACCACA
AACAAAGGGGAGGATTTGATGAAATTTGATCTGGGTATGAACCTAAAGGT
TGATGTAGAGCTTACAGAAGGCAATAATAAATGCAAAAAAGGGTGCGAAA
AGGAAGTTGATCAATTTCCCTTGTTCAGTTTTTCCAGTGTTTCTTCTGCA
ACTGGTAATTTCTCCGCAGCAAATAAGCTTGGCGAAGGAGGCTTCGGAAC
TGTTTACAAGGGAGTAATAGGGCATGGTGAGATAGCTGTGAAAAGGCTTT
TAGGAAAATCCGGACAGGAGATAAAAGAGTTAAAAAACGAAGCATCGGTA
ATAGCCCAGGTTCAACACAAGAATCTTGTTAAACTCTTGGGTTGCTGCAT
TGAGAAAGATGAGAGGTTATTGATCTATGAGTACATGCCAAATAAAAGCT
TGGATTGCTTCCTCTTTGATC
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