CN189461

Overview
NameCN189461
Unique NameCN189461
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length731
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN189461_ssr17 microsatellite CN189461_ssr17:17..26. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13557 contig Csv1_Contig13557:20..750. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189461 vs. ExPASy Swiss-Prot
Match: ENO_YERP3 (Enolase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=eno PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.598e-53
Identity = 122/220 (55.45%), Postives = 147/220 (66.82%), Query Frame = 2
Query:   77 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN-LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXEAMKMGVEVYHHLKAVIKKRYGQDATNVGDEGSFAPN 730
            I  V  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV KAV+ VN  I  A+ GKD  +Q  ID  M+  LDGT N     K + GANAILAVSLA  KA A  K +PLY+HIAEL+G      +P+P  N+INGG HA N + +QEFMI PVGA +  EA+++G EV+HHL  V+K + G + T VGDEG +APN
Sbjct:    4 IVKVIGREIIDSRGNPTVEAEVHLEGGFVGLAAAPSGASTGSREALELRDGDKSRFLGKGVLKAVAAVNGPIAQAVIGKDAKDQANIDKIMID-LDGTEN-----KSQFGANAILAVSLAAAKAAAASKGMPLYEHIAELNGTPGKFSMPLPMMNIINGGEHADNNVDIQEFMIQPVGAKTLKEAVRIGSEVFHHLAKVLKAK-GLN-TAVGDEGGYAPN 215          
BLAST of CN189461 vs. ExPASy Swiss-Prot
Match: ENO_STAAU (Enolase OS=Staphylococcus aureus GN=eno PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.598e-53
Identity = 118/220 (53.64%), Postives = 154/220 (70.00%), Query Frame = 2
Query:   77 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPT--EQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXEAMKMGVEVYHHLKAVIKKRYGQDATNVGDEGSFAP 727
            IT V AR++ DSRGNPTVEV+V T  G   RA VPSGASTG +EA+ELRDG  S YLGKGV+KAV NVN II P +   + +  +Q +ID  M+  LDGT N     K KLGANAIL VS+AV +A A +   PLYK++   +G +   LPVP  N++NGGSH+   +A QEFMILPVGA++F E+++ G E++H+LK+++ +R  +  T VGDEG FAP
Sbjct:    4 ITDVYAREVLDSRGNPTVEVEVLTESGAFGRALVPSGASTGEHEAVELRDGDKSRYLGKGVTKAVENVNEIIAPEIIEGEFSVLDQVSIDKMMIA-LDGTPN-----KGKLGANAILGVSIAVARAAADLLGQPLYKYLGGFNGKQ---LPVPMMNIVNGGSHSDAPIAFQEFMILPVGATTFKESLRWGTEIFHNLKSILSQRGLE--TAVGDEGGFAP 212          
BLAST of CN189461 vs. ExPASy Swiss-Prot
Match: ENO_PROM2 (Enolase OS=Prochlorococcus marinus (strain MIT 9215) GN=eno PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.598e-53
Identity = 111/218 (50.92%), Postives = 149/218 (68.35%), Query Frame = 2
Query:   77 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXEAMKMGVEVYHHLKAVIKKRYGQDATNVGDEGSFAPN 730
            I  ++ARQ+ DSRGNPTVE +V    G    A VPSGASTG +EA ELRDGGS Y+GKGV  AV+ ++  I PAL G    +QTA+D  M  ++DGT+N     K  LGAN+ILAVSLA  +A A+   IPLY+++ +   N   +LPVP  NVINGG+HA N L  QEFM++P G ++F E+++MG E++H LK+++ ++    +T VGDEG FAPN
Sbjct:    9 IDTIEARQVLDSRGNPTVEAEVFLECGASGIAIVPSGASTGAHEAHELRDGGSKYMGKGVLSAVNKIHETISPALCGLSALDQTAVDKLMT-EIDGTLN-----KSNLGANSILAVSLATARASANALDIPLYRYLGDPLSN---LLPVPLMNVINGGAHAPNSLDFQEFMLVPHGVNNFSESLRMGTEIFHSLKSLLDQK--GLSTAVGDEGGFAPN 215          
BLAST of CN189461 vs. ExPASy Swiss-Prot
Match: ENO_MYCBT (Enolase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=eno PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.598e-53
Identity = 116/218 (53.21%), Postives = 148/218 (67.89%), Query Frame = 2
Query:   77 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXEAMKMGVEVYHHLKAVIKKRYGQDATNVGDEGSFAPN 730
            I  V AR+I DSRGNPTVEV+V   DG  ARAAVPSGASTG +EA+ELRDGG  Y GKGV KAV  V   IGPA+ G +  +Q  +D  +V  LDGT +     K +LG NAIL VSLAV KA A   ++PL++++    G    +LPVP  N++NGG+HA   + +QEFM+ P+GA SF EA++ G EVYH LK+V+KK     +T +GDEG FAP+
Sbjct:    4 IEQVGAREILDSRGNPTVEVEVALIDGTFARAAVPSGASTGEHEAVELRDGGDRYGGKGVQKAVQAVLDEIGPAVIGLNADDQRLVDQALV-DLDGTPD-----KSRLGGNAILGVSLAVAKAAADSAELPLFRYV---GGPNAHILPVPMMNILNGGAHADTAVDIQEFMVAPIGAPSFVEALRWGAEVYHALKSVLKKE--GLSTGLGDEGGFAPD 210          
BLAST of CN189461 vs. ExPASy Swiss-Prot
Match: ENO_MYCBP (Enolase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=eno PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.598e-53
Identity = 116/218 (53.21%), Postives = 148/218 (67.89%), Query Frame = 2
Query:   77 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXEAMKMGVEVYHHLKAVIKKRYGQDATNVGDEGSFAPN 730
            I  V AR+I DSRGNPTVEV+V   DG  ARAAVPSGASTG +EA+ELRDGG  Y GKGV KAV  V   IGPA+ G +  +Q  +D  +V  LDGT +     K +LG NAIL VSLAV KA A   ++PL++++    G    +LPVP  N++NGG+HA   + +QEFM+ P+GA SF EA++ G EVYH LK+V+KK     +T +GDEG FAP+
Sbjct:    4 IEQVGAREILDSRGNPTVEVEVALIDGTFARAAVPSGASTGEHEAVELRDGGDRYGGKGVQKAVQAVLDEIGPAVIGLNADDQRLVDQALV-DLDGTPD-----KSRLGGNAILGVSLAVAKAAADSAELPLFRYV---GGPNAHILPVPMMNILNGGAHADTAVDIQEFMVAPIGAPSFVEALRWGAEVYHALKSVLKKE--GLSTGLGDEGGFAPD 210          
BLAST of CN189461 vs. ExPASy Swiss-Prot
Match: ENO_MYCBO (Enolase OS=Mycobacterium bovis GN=eno PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.598e-53
Identity = 116/218 (53.21%), Postives = 148/218 (67.89%), Query Frame = 2
Query:   77 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXEAMKMGVEVYHHLKAVIKKRYGQDATNVGDEGSFAPN 730
            I  V AR+I DSRGNPTVEV+V   DG  ARAAVPSGASTG +EA+ELRDGG  Y GKGV KAV  V   IGPA+ G +  +Q  +D  +V  LDGT +     K +LG NAIL VSLAV KA A   ++PL++++    G    +LPVP  N++NGG+HA   + +QEFM+ P+GA SF EA++ G EVYH LK+V+KK     +T +GDEG FAP+
Sbjct:    4 IEQVGAREILDSRGNPTVEVEVALIDGTFARAAVPSGASTGEHEAVELRDGGDRYGGKGVQKAVQAVLDEIGPAVIGLNADDQRLVDQALV-DLDGTPD-----KSRLGGNAILGVSLAVAKAAADSAELPLFRYV---GGPNAHILPVPMMNILNGGAHADTAVDIQEFMVAPIGAPSFVEALRWGAEVYHALKSVLKKE--GLSTGLGDEGGFAPD 210          
BLAST of CN189461 vs. ExPASy Swiss-Prot
Match: ENO_CLOPS (Enolase OS=Clostridium perfringens (strain SM101 / Type A) GN=eno PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.598e-53
Identity = 123/224 (54.91%), Postives = 148/224 (66.07%), Query Frame = 2
Query:   62 KMAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXEAMKMGVEVYHHLKAVIKKRYGQDATNVGDEGSFAPN 730
            K  I I  V ARQI DSR  PTVEV+V   DG V RAAVPSGASTGIYEA+ELRDG  D YLGKGV KAV+NVN  I   + G +  +Q  ID  ++ +LDGT N     K KLGANAIL VSLAV +A A+   +PLY++I  ++     VLPVP  N+INGGSHA N + +QEFMI+PVG   F  A++   EVYH LK  +  +    +T VGDEG FAPN
Sbjct:    2 KQYIEIIDVVARQILDSRCFPTVEVEVYLEDGTVGRAAVPSGASTGIYEAVELRDGDKDKYLGKGVEKAVANVNDTIAEEIIGLNVLDQAYIDKTLI-ELDGTKN-----KGKLGANAILGVSLAVAQAAANYLGMPLYQYIGGVNAK---VLPVPMMNIINGGSHADNSVDIQEFMIMPVGFDCFERAVRACAEVYHALKKTLNSK--GYSTGVGDEGGFAPN 214          
BLAST of CN189461 vs. ExPASy Swiss-Prot
Match: ENO_CLOP1 (Enolase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=eno PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.598e-53
Identity = 123/224 (54.91%), Postives = 148/224 (66.07%), Query Frame = 2
Query:   62 KMAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXEAMKMGVEVYHHLKAVIKKRYGQDATNVGDEGSFAPN 730
            K  I I  V ARQI DSR  PTVEV+V   DG V RAAVPSGASTGIYEA+ELRDG  D YLGKGV KAV+NVN  I   + G +  +Q  ID  ++ +LDGT N     K KLGANAIL VSLAV +A A+   +PLY++I  ++     VLPVP  N+INGGSHA N + +QEFMI+PVG   F  A++   EVYH LK  +  +    +T VGDEG FAPN
Sbjct:    2 KQYIEIIDVVARQILDSRCFPTVEVEVYLEDGTVGRAAVPSGASTGIYEAVELRDGDKDKYLGKGVEKAVANVNDTIAEEIIGLNVLDQAYIDKTLI-ELDGTKN-----KGKLGANAILGVSLAVAQAAANYLGMPLYQYIGGVNAK---VLPVPMMNIINGGSHADNSVDIQEFMIMPVGFDCFERAVRACAEVYHALKKTLNSK--GYSTGVGDEGGFAPN 214          
BLAST of CN189461 vs. ExPASy Swiss-Prot
Match: ENO_ACIAC (Enolase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=eno PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.598e-53
Identity = 117/219 (53.42%), Postives = 148/219 (67.58%), Query Frame = 2
Query:   77 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXEAMKMGVEVYHHLKAVIKKRYGQDATNVGDEGSFAPN 730
            I  +  R++ DSRGNPTVE DV    G + RAAVPSGASTG  EA+ELRDG  S YLGKGV KAV ++N  I  A+ G D +EQ  +D  ++  LDGT N     K +LGANA+LAVS+AV +A A    +PLY+++  + G   L LPVP  NVINGG+HA N L +QEFMI+PVGA SF EA++ G EV+H LK +I  +    +T VGDEG FAP+
Sbjct:    4 IVDIVGREVLDSRGNPTVECDVLLESGVMGRAAVPSGASTGSREAIELRDGDKSRYLGKGVLKAVEHINTEISEAVLGLDASEQAFLDKTLID-LDGTDN-----KSRLGANAMLAVSMAVARAAAEESGLPLYRYLGGMGG---LQLPVPMMNVINGGAHANNSLDLQEFMIIPVGAPSFREAVRWGAEVFHALKKIINDK--GMSTAVGDEGGFAPS 211          
BLAST of CN189461 vs. ExPASy Swiss-Prot
Match: ENO1_LACLS (Enolase 1 OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=eno1 PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.598e-53
Identity = 116/221 (52.49%), Postives = 152/221 (68.78%), Query Frame = 2
Query:   65 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXEAMKMGVEVYHHLKAVIKKRYGQDATNVGDEGSFAP 727
            M +TI  + AR+IFDSRGNPTVEVDV  +DG + RAAVPSGASTG  EA+ELRDGG+   GK VSKAV+NVN  I  AL G+ P  Q  +D+ M+ +LDGT N     K +LGANAIL VS+A+ +A A+ +KIPLY+++    G  +L LP P FNVINGG HA + + +QEF+I PV  +SF + ++    +YH LK ++  +  +  T VGDEG FAP
Sbjct:    1 MTVTIENIHAREIFDSRGNPTVEVDVRLTDGTLGRAAVPSGASTGDREAVELRDGGARLQGKDVSKAVANVNGEIYEALKGQSPFNQAKLDHLMI-ELDGTKN-----KSRLGANAILGVSMAIARAAANSEKIPLYRYL----GGVDLELPQPFFNVINGGVHADSGIDVQEFLITPVKRASFRDGLEKIANIYHTLKKILADKGLE--TAVGDEGGFAP 209          
The following BLAST results are available for this feature:
BLAST of CN189461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_YERP35.598e-5355.45Enolase OS=Yersinia pseudotuberculosis serotype O:... [more]
ENO_STAAU5.598e-5353.64Enolase OS=Staphylococcus aureus GN=eno PE=1 SV=1[more]
ENO_PROM25.598e-5350.92Enolase OS=Prochlorococcus marinus (strain MIT 921... [more]
ENO_MYCBT5.598e-5353.21Enolase OS=Mycobacterium bovis (strain BCG / Tokyo... [more]
ENO_MYCBP5.598e-5353.21Enolase OS=Mycobacterium bovis (strain BCG / Paste... [more]
ENO_MYCBO5.598e-5353.21Enolase OS=Mycobacterium bovis GN=eno PE=3 SV=1[more]
ENO_CLOPS5.598e-5354.91Enolase OS=Clostridium perfringens (strain SM101 /... [more]
ENO_CLOP15.598e-5354.91Enolase OS=Clostridium perfringens (strain ATCC 13... [more]
ENO_ACIAC5.598e-5353.42Enolase OS=Acidovorax avenae subsp. citrulli (stra... [more]
ENO1_LACLS5.598e-5352.49Enolase 1 OS=Lactococcus lactis subsp. cremoris (s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001O09_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001O09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189461 ID=CN189461; Name=CN189461; organism=Citrus sinensis; type=EST; length=731bp
GAGGTGCACTCACAGACTCTCTCTCTCGTTCTAGATCTTTCTTCGCTTTT
CCAGCTTTCAGAAAATGGCAATAACCATCACTGCCGTCAAAGCCAGGCAG
ATCTTTGACAGCCGTGGAAATCCAACGGTGGAGGTCGACGTGACAACATC
AGATGGCCACGTGGCTAGAGCTGCTGTTCCAAGCGGTGCATCCACCGGAA
TTTATGAGGCGCTTGAACTAAGAGACGGAGGCTCTGATTACCTAGGCAAG
GGTGTATCGAAGGCTGTTAGCAATGTCAACGCCATCATTGGCCCTGCACT
CGCTGGCAAGGACCCAACTGAGCAGACTGCTATTGACAACTATATGGTAC
AACAACTTGATGGAACTGTAAATGAGTGGGGTTGGTGCAAACAGAAGCTT
GGAGCAAACGCCATTTTGGCTGTCTCCCTAGCTGTCTGCAAGGCTGGTGC
ACATGTCAAGAAGATTCCTCTTTACAAGCATATTGCCGAACTCTCTGGTA
ACAAGAATTTGGTGTTGCCAGTGCCAGCATTCAATGTCATTAATGGTGGA
TCACATGCTGGAAACAAACTTGCTATGCAGGAGTTTATGATTCTTCCTGT
AGGAGCTTCCTCTTTCANAGAAGCCATGAAGATGGGTGTAGAAGTATATC
ACCATCTGAAGGCTGTGATTAAAAAGAGATACGGCCAGGATGCTACAAAT
GTTGGTGATGAAGGCAGTTTTGCTCCCAATA
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