CN189461

Overview
NameCN189461
Unique NameCN189461
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length731
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN189461_ssr17 microsatellite CN189461_ssr17:17..26. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13557 contig Csv1_Contig13557:20..750. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189461 vs. ExPASy Swiss-Prot
Match: ENO_PYRFU (Enolase OS=Pyrococcus furiosus GN=eno PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.797e-59
Identity = 131/217 (60.37%), Postives = 152/217 (70.05%), Query Frame = 2
Query:   77 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXEAMKMGVEVYHHLKAVIKKRYGQDATNVGDEGSFAP 727
            I  V AR+I DSRGNPTVEVDV T  G + RAAVPSGASTG +EALELRDGG  Y GKGV +AV NVN II P L G D   Q  ID  +++ LDGT N     K  +GANAILAVSLAV KA A+  ++PLY++   L G    VLPVP  NVINGG HAGN L  QEFMI+P+GA SF EA++   E YH LK VI ++YG++A NVGDEG FAP
Sbjct:    7 IVGVVAREILDSRGNPTVEVDVYTHVG-MGRAAVPSGASTGTHEALELRDGGKRYHGKGVRRAVENVNKIIAPELIGMDVRWQREIDALLLE-LDGTEN-----KSNVGANAILAVSLAVAKAAANSLELPLYQY---LGGVNAYVLPVPLSNVINGGVHAGNDLDFQEFMIMPIGADSFREAIRWVSETYHVLKKVIMEKYGKNAVNVGDEGGFAP 213          
BLAST of CN189461 vs. ExPASy Swiss-Prot
Match: ENO_ACIAD (Enolase OS=Acinetobacter sp. (strain ADP1) GN=eno PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.347e-59
Identity = 128/219 (58.45%), Postives = 156/219 (71.23%), Query Frame = 2
Query:   77 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXEAMKMGVEVYHHLKAVIKKRYGQDATNVGDEGSFAPN 730
            I  ++AR+I DSRGNPT+E DV  + G V RA  PSGASTG  EALELRDG  + YLGKGV  AV+NVN II  AL GK   EQ  IDN M++ LDGT N     K+KLGANA LAVSLA  +A A  KKIPL+++IA+L G   L +PVP  N+INGGSHA N + +QEFMI PVG +SF EA++ G E++H LK+V+ K+ G + T VGDEG FAPN
Sbjct:    6 IVDIRAREILDSRGNPTIEADVILASGVVGRACAPSGASTGSREALELRDGDKARYLGKGVKTAVNNVNTIIRDALVGKSVFEQKDIDNTMIE-LDGTEN-----KEKLGANATLAVSLAAARAAADEKKIPLFQYIADLRGQTILTMPVPMMNIINGGSHADNNVDIQEFMIEPVGFTSFSEALRAGAEIFHSLKSVLNKK-GLN-TAVGDEGGFAPN 216          
BLAST of CN189461 vs. ExPASy Swiss-Prot
Match: ENO_CARHZ (Enolase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=eno PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 4.003e-59
Identity = 128/220 (58.18%), Postives = 155/220 (70.45%), Query Frame = 2
Query:   77 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXEAMKMGVEVYHHLKAVIK-KRYGQDATNVGDEGSFAPN 730
            I  V AR+I DSRGNPTVEVDV   DG   RAAVPSGASTG +EA+ELRD     YLGKGV++AV NVN+IIGP + G D  +Q  ID Y+++ LDGT N     K KLGANAIL VS+AV KA A+   +PLY++   L G    VLP P  N++NGG HA N + +QEFMI+P+GASSF EA++MG EV+H+LK V+K K Y    T VGDEG FAPN
Sbjct:    4 IREVIAREILDSRGNPTVEVDVILEDGTWGRAAVPSGASTGAFEAVELRDNDPQRYLGKGVTQAVENVNSIIGPEILGFDALDQVGIDEYLIE-LDGTPN-----KGKLGANAILGVSMAVAKAAANYLGLPLYRY---LGGTNARVLPAPMMNILNGGKHADNNVDIQEFMIMPLGASSFSEALRMGAEVFHNLKKVLKGKGYN---TAVGDEGGFAPN 211          
BLAST of CN189461 vs. ExPASy Swiss-Prot
Match: ENO_PSYWF (Enolase OS=Psychrobacter sp. (strain PRwf-1) GN=eno PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 5.228e-59
Identity = 125/222 (56.31%), Postives = 159/222 (71.62%), Query Frame = 2
Query:   68 AITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXEAMKMGVEVYHHLKAVIKKRYGQDATNVGDEGSFAPN 730
            A+ I  ++AR+I DSRGNPT+E DV  +DG + RAA PSGASTG  EALELRDG  S YLGKGV+KAV+NVN+ I  AL   D T+Q  IDN +++ LDGT N     K  LGANA+LAVSLA  KA A  + +PL+++IA L G  +L +PVP  N++NGG HA N + +QEFMI P G SSF EA++ GVE++H LK+V+K + G + T VGDEG FAPN
Sbjct:    9 AVEIQDIRAREILDSRGNPTIEADVILADGSMGRAAAPSGASTGSREALELRDGDKSRYLGKGVTKAVANVNSQIRSALLESDATDQQGIDNILIE-LDGTAN-----KDHLGANAMLAVSLATAKAAAISQNLPLHQYIANLRGQTSLTMPVPMMNILNGGEHADNTVDIQEFMIEPTGFSSFSEALRAGVEIFHSLKSVLKSQ-GLN-TAVGDEGGFAPN 222          
BLAST of CN189461 vs. ExPASy Swiss-Prot
Match: ENO_CYTH3 (Enolase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=eno PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 5.228e-59
Identity = 127/219 (57.99%), Postives = 152/219 (69.41%), Query Frame = 2
Query:   77 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXEAMKMGVEVYHHLKAVIKKRYGQDATNVGDEGSFAPN 730
            I  + ARQIFDSRGNPT+EVDV T +G + RAAVPSGASTG +EA+ELRD   S Y+GK V KAV+NVN II P L G    EQ  ID  M+  LDGT N     K KLGANAIL VSLA+ KA A    +PLY+++  +S N    LPVP  N+INGGSHA N +  QEFMI+P GA SF EAM+MG E++H+L  V+K +    +TNVGDEG FAPN
Sbjct:    4 IEEIVARQIFDSRGNPTIEVDVITENGLIGRAAVPSGASTGKHEAVELRDNDKSIYMGKSVLKAVANVNDIIAPELIGSHVFEQNLIDRLMID-LDGTAN-----KGKLGANAILGVSLALAKAAAQEAGLPLYRYVGGVSAN---TLPVPMMNIINGGSHADNSIDFQEFMIMPTGAKSFTEAMRMGSEIFHNLAKVLKSK--GMSTNVGDEGGFAPN 211          
BLAST of CN189461 vs. ExPASy Swiss-Prot
Match: ENO_CALS8 (Enolase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=eno PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 5.228e-59
Identity = 126/224 (56.25%), Postives = 158/224 (70.54%), Query Frame = 2
Query:   62 KMAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXEAMKMGVEVYHHLKAVIKKRYGQDATNVGDEGSFAPN 730
            K+ ++ITAVKAR+I DSRGNPTVEV+V  +D  V RAAVPSGASTG++EA+ELRDG    Y+GKGV KAV NVN +I P + G +   Q  ID  M+ +LDGT N     K KLGANAIL VSLAV KA A+   +PLY++I  ++      LPVP  N++NGG HA N + +QEFMI+PVGA SF EA++M  E +H L+ V+K R G + T VGDEG FAPN
Sbjct:    2 KVDLSITAVKAREILDSRGNPTVEVEVVVNDEFVGRAAVPSGASTGMFEAVELRDGDKKRYMGKGVLKAVENVNEVIAPEIIGMNALNQVEIDRLMI-ELDGTEN-----KSKLGANAILGVSLAVAKAAANALGLPLYQYIGGVNAK---YLPVPMMNILNGGKHADNSVDLQEFMIMPVGAKSFSEALRMCAETFHQLRNVLKAR-GYN-TTVGDEGGFAPN 214          
BLAST of CN189461 vs. ExPASy Swiss-Prot
Match: ENO_PSYCK (Enolase OS=Psychrobacter cryohalolentis (strain K5) GN=eno PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 8.917e-59
Identity = 127/219 (57.99%), Postives = 157/219 (71.69%), Query Frame = 2
Query:   77 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXEAMKMGVEVYHHLKAVIKKRYGQDATNVGDEGSFAPN 730
            I  ++AR+I DSRGNPT+E DV  +DG + RAA PSGASTG  EALELRDG  S Y+GKGV KAV+NVN+ I  AL  KD T Q AID+ M+  LDGT N     K  LGANAILAVSLAV KA A  + +PL+++IA+L    +L +PVP  N+INGG HA N + +QEFMI PVG SSF EA++ G E++H LK+V+K + G + T VGDEG FAPN
Sbjct:   12 IKDIRAREILDSRGNPTIEADVILADGTIGRAAAPSGASTGSREALELRDGDQSRYMGKGVKKAVANVNSQIRSALMDKDVTAQQAIDDAMIA-LDGTEN-----KDNLGANAILAVSLAVAKAAAKSQSLPLHQYIADLRNQTSLTMPVPMMNIINGGEHADNTVDIQEFMIEPVGFSSFSEALRAGTEIFHSLKSVLKSQ-GLN-TAVGDEGGFAPN 222          
BLAST of CN189461 vs. ExPASy Swiss-Prot
Match: ENO_META3 (Enolase OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=eno PE=3 SV=2)

HSP 1 Score: 226.868 bits (577), Expect = 8.917e-59
Identity = 125/217 (57.60%), Postives = 150/217 (69.12%), Query Frame = 2
Query:   77 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXEAMKMGVEVYHHLKAVIKKRYGQDATNVGDEGSFAP 727
            I  +KAR++ DSRGNPTVEV+V T+ G+   A VPSGASTG +EA+ELRD    + GKGV  AV NVN+II P L G D   Q  ID YM++ LD T N     K KLGANAILAVS+AV KA A    +PLYK+I    G  + ++PVP  NVINGG HAGN L  QEFMI+PVGA S  EA++M  E YH LK VI  +YG++A+NVGDEG FAP
Sbjct:    7 ILDIKAREVIDSRGNPTVEVEVLTAGGY-GSAIVPSGASTGTHEAVELRDKSQRFGGKGVLVAVDNVNSIIAPELIGFDSRTQREIDTYMIE-LDRTAN-----KGKLGANAILAVSMAVAKAAASTASLPLYKYIG---GCNSYIMPVPMMNVINGGEHAGNALEFQEFMIMPVGADSISEAIRMCAETYHTLKKVIVSKYGKNASNVGDEGGFAP 213          
BLAST of CN189461 vs. ExPASy Swiss-Prot
Match: ENO_PSEPK (Enolase OS=Pseudomonas putida (strain KT2440) GN=eno PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.165e-58
Identity = 125/220 (56.82%), Postives = 153/220 (69.55%), Query Frame = 2
Query:   77 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXEAMKMGVEVYHHLKAVIKKRYGQDATNVGDEGSFAPN 730
            I  +K R++ DSRGNPTVE DV   +G +  A  PSGASTG  EALELRDG  S YLGKGV KAV+N+N  I   L GKDP++Q A+D  M++ LDGT N     K KLGANAILAVSLA  KA A  + +PLY HIA L+G      +PVP  N+INGG HA N + +QEFM+ PVGA +F + ++MG E++HHLKAV+K R G + T VGDEG FAPN
Sbjct:    4 IVDIKGREVLDSRGNPTVEADVLLDNGIIGSACAPSGASTGSREALELRDGDKSRYLGKGVLKAVANINGPIRDLLLGKDPSDQKALDRAMIE-LDGTEN-----KAKLGANAILAVSLAAAKAAAQDQDLPLYAHIANLNGTPGQYSMPVPMMNIINGGEHADNNVDIQEFMVQPVGAKTFSDGLRMGTEIFHHLKAVLKAR-GLN-TAVGDEGGFAPN 215          
BLAST of CN189461 vs. ExPASy Swiss-Prot
Match: ENO_PSEPG (Enolase OS=Pseudomonas putida (strain GB-1) GN=eno PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.165e-58
Identity = 125/220 (56.82%), Postives = 153/220 (69.55%), Query Frame = 2
Query:   77 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXEAMKMGVEVYHHLKAVIKKRYGQDATNVGDEGSFAPN 730
            I  +K R++ DSRGNPTVE DV   +G +  A  PSGASTG  EALELRDG  S YLGKGV KAV+N+N  I   L GKDP++Q A+D  M++ LDGT N     K KLGANAILAVSLA  KA A  + +PLY HIA L+G      +PVP  N+INGG HA N + +QEFM+ PVGA +F + ++MG E++HHLKAV+K R G + T VGDEG FAPN
Sbjct:    4 IVDIKGREVLDSRGNPTVEADVLLDNGIIGSACAPSGASTGSREALELRDGDKSRYLGKGVLKAVANINGPIRELLLGKDPSDQKALDRAMIE-LDGTEN-----KAKLGANAILAVSLAAAKAAAQDQDLPLYAHIANLNGTPGQYSMPVPMMNIINGGEHADNNVDIQEFMVQPVGAKTFSDGLRMGTEIFHHLKAVLKAR-GLN-TAVGDEGGFAPN 215          
The following BLAST results are available for this feature:
BLAST of CN189461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_PYRFU1.797e-5960.37Enolase OS=Pyrococcus furiosus GN=eno PE=3 SV=1[more]
ENO_ACIAD2.347e-5958.45Enolase OS=Acinetobacter sp. (strain ADP1) GN=eno ... [more]
ENO_CARHZ4.003e-5958.18Enolase OS=Carboxydothermus hydrogenoformans (stra... [more]
ENO_PSYWF5.228e-5956.31Enolase OS=Psychrobacter sp. (strain PRwf-1) GN=en... [more]
ENO_CYTH35.228e-5957.99Enolase OS=Cytophaga hutchinsonii (strain ATCC 334... [more]
ENO_CALS85.228e-5956.25Enolase OS=Caldicellulosiruptor saccharolyticus (s... [more]
ENO_PSYCK8.917e-5957.99Enolase OS=Psychrobacter cryohalolentis (strain K5... [more]
ENO_META38.917e-5957.60Enolase OS=Methanococcus aeolicus (strain Nankai-3... [more]
ENO_PSEPK1.165e-5856.82Enolase OS=Pseudomonas putida (strain KT2440) GN=e... [more]
ENO_PSEPG1.165e-5856.82Enolase OS=Pseudomonas putida (strain GB-1) GN=eno... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001O09_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001O09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189461 ID=CN189461; Name=CN189461; organism=Citrus sinensis; type=EST; length=731bp
GAGGTGCACTCACAGACTCTCTCTCTCGTTCTAGATCTTTCTTCGCTTTT
CCAGCTTTCAGAAAATGGCAATAACCATCACTGCCGTCAAAGCCAGGCAG
ATCTTTGACAGCCGTGGAAATCCAACGGTGGAGGTCGACGTGACAACATC
AGATGGCCACGTGGCTAGAGCTGCTGTTCCAAGCGGTGCATCCACCGGAA
TTTATGAGGCGCTTGAACTAAGAGACGGAGGCTCTGATTACCTAGGCAAG
GGTGTATCGAAGGCTGTTAGCAATGTCAACGCCATCATTGGCCCTGCACT
CGCTGGCAAGGACCCAACTGAGCAGACTGCTATTGACAACTATATGGTAC
AACAACTTGATGGAACTGTAAATGAGTGGGGTTGGTGCAAACAGAAGCTT
GGAGCAAACGCCATTTTGGCTGTCTCCCTAGCTGTCTGCAAGGCTGGTGC
ACATGTCAAGAAGATTCCTCTTTACAAGCATATTGCCGAACTCTCTGGTA
ACAAGAATTTGGTGTTGCCAGTGCCAGCATTCAATGTCATTAATGGTGGA
TCACATGCTGGAAACAAACTTGCTATGCAGGAGTTTATGATTCTTCCTGT
AGGAGCTTCCTCTTTCANAGAAGCCATGAAGATGGGTGTAGAAGTATATC
ACCATCTGAAGGCTGTGATTAAAAAGAGATACGGCCAGGATGCTACAAAT
GTTGGTGATGAAGGCAGTTTTGCTCCCAATA
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