CN189457
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189457 vs. ExPASy Swiss-Prot
Match: HSF8_SOLPE (Heat shock factor protein HSF8 OS=Solanum peruvianum GN=HSF8 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.004e-15 Identity = 41/84 (48.81%), Postives = 53/84 (63.10%), Query Frame = 3 Query: 282 PSESGADEAAV-------MTMMMAAPQPMEGLHDTGPPPFLTKTYEMVDDPNTNEVVSWSRGGVSFVVWDPHAFSTSLLPRHFK 512 P+ SG+ +AAV M+ AP P PPPFL KTY+MVDDP+T+++VSWS SFVVWDP F+ LLP++FK Sbjct: 3 PNSSGSGKAAVGDGGGGGAPMLQPAPAPAPMPSANAPPPFLVKTYDMVDDPSTDKIVSWSPTNNSFVVWDPPEFAKDLLPKYFK 86
BLAST of CN189457 vs. ExPASy Swiss-Prot
Match: HFA6B_ORYSJ (Heat stress transcription factor A-6a OS=Oryza sativa subsp. japonica GN=HSFA6B PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.237e-15 Identity = 38/61 (62.30%), Postives = 44/61 (72.13%), Query Frame = 3 Query: 336 PQPMEGLHDTGPPPFLTKTYEMVDDPNTNEVVSWSRG--GVSFVVWDPHAFSTSLLPRHFK 512 P+PMEGL + GP PF+ KTYEMV D T+ VVSW G G SFVVWDPHA + +LPR FK Sbjct: 80 PRPMEGLGEAGPAPFVAKTYEMVADAATDAVVSWGPGGSGASFVVWDPHALAAGVLPRFFK 140
BLAST of CN189457 vs. ExPASy Swiss-Prot
Match: HSF8_SOLLC (Heat shock factor protein HSF8 OS=Solanum lycopersicum GN=HSF8 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.921e-15 Identity = 40/82 (48.78%), Postives = 52/82 (63.41%), Query Frame = 3 Query: 282 PSESGADEAAV-----MTMMMAAPQPMEGLHDTGPPPFLTKTYEMVDDPNTNEVVSWSRGGVSFVVWDPHAFSTSLLPRHFK 512 P+ G+ +AAV M+ AP P PPPFL KTY+MVDDP+T+++VSWS SFVVWDP F+ LLP++FK Sbjct: 3 PNSYGSGKAAVGDGVGAPMLQTAPAPAPIPSANAPPPFLVKTYDMVDDPSTDKIVSWSPTNNSFVVWDPPEFAKDLLPKYFK 84
BLAST of CN189457 vs. ExPASy Swiss-Prot
Match: HFA1D_ARATH (Heat stress transcription factor A-1d OS=Arabidopsis thaliana GN=HSFA1D PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 3.230e-14 Identity = 37/76 (48.68%), Postives = 48/76 (63.16%), Query Frame = 3 Query: 285 SESGADEAAVMTMMMAAPQPMEGLHDTGPPPFLTKTYEMVDDPNTNEVVSWSRGGVSFVVWDPHAFSTSLLPRHFK 512 S+ G D ++ T PQP L PPPFL+KTY+MVDD NT+ +VSWS SF+VW P F+ LLP++FK Sbjct: 9 SDGGGD--SMETKPSPQPQPAAILSSNAPPPFLSKTYDMVDDHNTDSIVSWSANNNSFIVWKPPEFARDLLPKNFK 82
BLAST of CN189457 vs. ExPASy Swiss-Prot
Match: HFA4D_ORYSJ (Heat stress transcription factor A-4d OS=Oryza sativa subsp. japonica GN=HSFA4D PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 7.196e-14 Identity = 34/49 (69.39%), Postives = 38/49 (77.55%), Query Frame = 3 Query: 366 GPPPFLTKTYEMVDDPNTNEVVSWSRGGVSFVVWDPHAFSTSLLPRHFK 512 GPPPFL KTYEMV+D TN VVSW GG SFVVW+P FS LLP++FK Sbjct: 17 GPPPFLIKTYEMVEDAATNHVVSWGPGGASFVVWNPLDFSRDLLPKYFK 65
BLAST of CN189457 vs. ExPASy Swiss-Prot
Match: HFA6A_ARATH (Heat stress transcription factor A-6a OS=Arabidopsis thaliana GN=HSFA6A PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.603e-13 Identity = 33/59 (55.93%), Postives = 42/59 (71.19%), Query Frame = 3 Query: 336 PQPMEGLHDTGPPPFLTKTYEMVDDPNTNEVVSWSRGGVSFVVWDPHAFSTSLLPRHFK 512 P P+EGL +T P FLTKTY +V+D +TN +VSWSR SF+VW+P F+ LPR FK Sbjct: 6 PIPLEGLKETPPTAFLTKTYNIVEDSSTNNIVSWSRDNNSFIVWEPETFALICLPRCFK 64
BLAST of CN189457 vs. ExPASy Swiss-Prot
Match: HSFA3_ORYSJ (Heat stress transcription factor A-3 OS=Oryza sativa subsp. japonica GN=HSFA3 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.734e-13 Identity = 38/86 (44.19%), Postives = 54/86 (62.79%), Query Frame = 3 Query: 261 EEQPGGIPSESGADEAAVMTMMMAAPQPMEGLHDTGP--PPFLTKTYEMVDDPNTNEVVSWSRGGVSFVVWDPHAFSTSLLPRHFK 512 ++ GG P + A + + +M P+P+E L GP PPFL+KTY++V +P + V+SW G SFVVWDP AF+ +LP HFK Sbjct: 29 DDDGGGEPLQP-APFVSPLDQLMQPPRPLEALLQ-GPQLPPFLSKTYDLVCEPELDGVISWGHAGNSFVVWDPSAFARDVLPHHFK 112
BLAST of CN189457 vs. ExPASy Swiss-Prot
Match: HFB2A_ORYSJ (Heat stress transcription factor B-2a OS=Oryza sativa subsp. japonica GN=HSFB2A PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 6.092e-13 Identity = 30/49 (61.22%), Postives = 38/49 (77.55%), Query Frame = 3 Query: 366 GPPPFLTKTYEMVDDPNTNEVVSWSRGGVSFVVWDPHAFSTSLLPRHFK 512 G PPFLTKTY MV+DP+T+E +SW+ G +FVVW P F+ LLP+HFK Sbjct: 7 GTPPFLTKTYAMVEDPSTDETISWNDSGTAFVVWRPAEFARDLLPKHFK 55
BLAST of CN189457 vs. ExPASy Swiss-Prot
Match: HFA6A_ORYSJ (Putative heat stress transcription factor A-6a OS=Oryza sativa subsp. japonica GN=HSFA6A PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 7.956e-13 Identity = 45/94 (47.87%), Postives = 56/94 (59.57%), Query Frame = 3 Query: 246 YYMIKEEQPGGIPSESGADEAAVMTMMMAAPQPMEGLHDTGPP--PFLTKTYEMVDDPNTNEVVSWSRGGV---SFVVWDPHAFSTSLLPRHFK 512 Y +K+E+ + + G +EAA AAP P+ G PFL KT+EMV+DP T+ VVSW GG SFVVWDPHAF+ LLP HFK Sbjct: 3 YSTVKQEEVEVVVLD-GEEEAAAA----AAPVPLPAAMGVGAAVAPFLVKTFEMVEDPATDAVVSW--GGAARNSFVVWDPHAFAAGLLPLHFK 89
BLAST of CN189457 vs. ExPASy Swiss-Prot
Match: HSFA1_ORYSJ (Heat stress transcription factor A-1 OS=Oryza sativa subsp. japonica GN=HSFA1 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.039e-12 Identity = 38/77 (49.35%), Postives = 46/77 (59.74%), Query Frame = 3 Query: 291 SGADEAAVMTMMMAAPQPMEGLHD---TGPPPFLTKTYEMVDDPNTNEVVSWSRGGVSFVVWDPHAFSTSLLPRHFK 512 + A AA AP P + + T PPPFL KTYEMVDDP T+ VVSW G SFVVW+ F+ LLP++FK Sbjct: 6 AAAAAAAGAVTTAVAPPPGAAVSNGVATAPPPFLMKTYEMVDDPATDAVVSWGPGNNSFVVWNTPEFARDLLPKYFK 82 The following BLAST results are available for this feature:
BLAST of CN189457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189457 ID=CN189457; Name=CN189457; organism=Citrus sinensis; type=EST; length=514bpback to top |