CN189456
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189456 vs. ExPASy Swiss-Prot
Match: SODM_AGABI (Superoxide dismutase [Mn], mitochondrial OS=Agaricus bisporus GN=sod PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.565e-39 Identity = 88/196 (44.90%), Postives = 117/196 (59.69%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKF--NGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 706 LPDLPY Y ALEP IS +IM+LHH+K Q + + T+ V ++ F GH+NHS+FW+NLAP GG+ L AID FG L+ L ++ + A +QGSGW WLG++ KRL + TT NQDPL+ LVP++G+D+WEHA+YLQY NVK DYL IW+V+N+ A Y Sbjct: 5 LPDLPYAYDALEPYISRQIMELHHKKTSSDLCE-----CAQHCRGCLRHSTAVVGGFDLSLFFILTTLGHINHSLFWQNLAPAAGAGGQLKPGPLKDAIDQTFGGLDNLKKEFNTTTAGIQGSGWGWLGVNPSNKRLEISTTPNQDPLL----NLVPIIGVDIWEHAFYLQYLNVKADYLNAIWSVINFDEAQRRY 191
BLAST of CN189456 vs. ExPASy Swiss-Prot
Match: SODM_STRP8 (Superoxide dismutase [Mn] OS=Streptococcus pyogenes serotype M18 GN=sodA PE=3 SV=3) HSP 1 Score: 160.999 bits (406), Expect = 5.962e-39 Identity = 84/204 (41.18%), Postives = 122/204 (59.80%), Query Frame = 2 Query: 119 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQ-------LFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 709 + LP+LPY Y ALEP E M LHH KHH YV N N A+E+ L + L V T ++ A+ NGGGH+NH++FW+ L+P + + AID FGS +A ++ +A GSGW WL ++ E +L + +TANQD +++ P+L +DVWEHAYYL Y+NV+P+Y+K + ++NWK S++YQ Sbjct: 3 IILPELPYAYDALEPQFDAETMSLHHDKHHATYVANTNAALEKHPEIGENLEELLADV-TKIPEDIRQALINNGGGHLNHALFWELLSPEKQD----VTPDVAQAIDDAFGSFDAFKEQFTAAATGRFGSGWAWLVVNKE-GQLEITSTANQDTPISEGKK--PILALDVWEHAYYLNYRNVRPNYIKAFFEIINWKKVSELYQ 198
BLAST of CN189456 vs. ExPASy Swiss-Prot
Match: SODM_PASMU (Superoxide dismutase [Mn] OS=Pasteurella multocida GN=sodA PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.962e-39 Identity = 93/211 (44.08%), Postives = 125/211 (59.24%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQL--------FQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKAPTLV---PLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKEM 718 TLP+L Y Y ALEP M++HH KHHQAYV N N A+E L Q L K+ +L AI+ N GGH+NHS+FWK+L G +L AI FGS+EA + A GSGW WL L E +L V +TANQD P++ KA PLLG+DVWEHAYYL+++N +PDY+K W+V+NW + ++ ++K++ Sbjct: 4 TLPELGYAYDALEPHFDAMTMEIHHSKHHQAYVNNANAALENLPELAQGCPGQLLTKLAEVPADKLT-AIRNNVGGHLNHSLFWKSLKK-----GTTLQGALKDAIVRDFGSVEAFQAEFEKAAATRFGSGWAWLVLQ-ENGKLAVVSTANQDSPVMGKAIAGCEGYPLLGLDVWEHAYYLKFQNRRPDYIKEFWHVVNWDFVAERFEKKV 207
BLAST of CN189456 vs. ExPASy Swiss-Prot
Match: SODM1_STAAW (Superoxide dismutase [Mn/Fe] 1 OS=Staphylococcus aureus (strain MW2) GN=sodA PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.962e-39 Identity = 83/200 (41.50%), Postives = 117/200 (58.50%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDT------STVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 706 LP LPY + ALEP E M++HH +HH YVT N AVE ++ S +Q A++ NGGGH+NHS+FW+ L+P E G I +GSLE ++ + + AA GSGW WL ++ +L + TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ ++Y Sbjct: 5 LPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVEGTDLESKSIEEIVANLDSVPANIQTAVRNNGGGHLNHSLFWELLSPNSEEKGTVVEK-----IKEQWGSLEEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPLTEGKT--PILGLDVWEHAYYLKYQNKRPDYIGAFWNVVNWEKVDELY 195
BLAST of CN189456 vs. ExPASy Swiss-Prot
Match: SODM1_STAAS (Superoxide dismutase [Mn/Fe] 1 OS=Staphylococcus aureus (strain MSSA476) GN=sodA PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.962e-39 Identity = 83/200 (41.50%), Postives = 117/200 (58.50%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDT------STVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 706 LP LPY + ALEP E M++HH +HH YVT N AVE ++ S +Q A++ NGGGH+NHS+FW+ L+P E G I +GSLE ++ + + AA GSGW WL ++ +L + TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ ++Y Sbjct: 5 LPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVEGTDLESKSIEEIVANLDSVPANIQTAVRNNGGGHLNHSLFWELLSPNSEEKGTVVEK-----IKEQWGSLEEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPLTEGKT--PILGLDVWEHAYYLKYQNKRPDYIGAFWNVVNWEKVDELY 195
BLAST of CN189456 vs. ExPASy Swiss-Prot
Match: SODM1_STAAR (Superoxide dismutase [Mn/Fe] 1 OS=Staphylococcus aureus (strain MRSA252) GN=sodA PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.962e-39 Identity = 83/200 (41.50%), Postives = 117/200 (58.50%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDT------STVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 706 LP LPY + ALEP E M++HH +HH YVT N AVE ++ S +Q A++ NGGGH+NHS+FW+ L+P E G I +GSLE ++ + + AA GSGW WL ++ +L + TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ ++Y Sbjct: 5 LPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVEGTDLESKSIEEIVANLDSVPANIQTAVRNNGGGHLNHSLFWELLSPNSEEKGTVVEK-----IKEQWGSLEEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPLTEGKT--PILGLDVWEHAYYLKYQNKRPDYIGAFWNVVNWEKVDELY 195
BLAST of CN189456 vs. ExPASy Swiss-Prot
Match: SODM1_STAAN (Superoxide dismutase [Mn/Fe] 1 OS=Staphylococcus aureus (strain N315) GN=sodA PE=1 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.962e-39 Identity = 83/200 (41.50%), Postives = 117/200 (58.50%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDT------STVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 706 LP LPY + ALEP E M++HH +HH YVT N AVE ++ S +Q A++ NGGGH+NHS+FW+ L+P E G I +GSLE ++ + + AA GSGW WL ++ +L + TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ ++Y Sbjct: 5 LPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVEGTDLESKSIEEIVANLDSVPANIQTAVRNNGGGHLNHSLFWELLSPNSEEKGTVVEK-----IKEQWGSLEEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPLTEGKT--PILGLDVWEHAYYLKYQNKRPDYIGAFWNVVNWEKVDELY 195
BLAST of CN189456 vs. ExPASy Swiss-Prot
Match: SODM1_STAAM (Superoxide dismutase [Mn/Fe] 1 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=sodA PE=1 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.962e-39 Identity = 83/200 (41.50%), Postives = 117/200 (58.50%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDT------STVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 706 LP LPY + ALEP E M++HH +HH YVT N AVE ++ S +Q A++ NGGGH+NHS+FW+ L+P E G I +GSLE ++ + + AA GSGW WL ++ +L + TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ ++Y Sbjct: 5 LPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVEGTDLESKSIEEIVANLDSVPANIQTAVRNNGGGHLNHSLFWELLSPNSEEKGTVVEK-----IKEQWGSLEEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPLTEGKT--PILGLDVWEHAYYLKYQNKRPDYIGAFWNVVNWEKVDELY 195
BLAST of CN189456 vs. ExPASy Swiss-Prot
Match: SODM1_STAAC (Superoxide dismutase [Mn/Fe] 1 OS=Staphylococcus aureus (strain COL) GN=sodA PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.962e-39 Identity = 83/200 (41.50%), Postives = 117/200 (58.50%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDT------STVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 706 LP LPY + ALEP E M++HH +HH YVT N AVE ++ S +Q A++ NGGGH+NHS+FW+ L+P E G I +GSLE ++ + + AA GSGW WL ++ +L + TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ ++Y Sbjct: 5 LPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVEGTDLESKSIEEIVANLDSVPANIQTAVRNNGGGHLNHSLFWELLSPNSEEKGTVVEK-----IKEQWGSLEEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPLTEGKT--PILGLDVWEHAYYLKYQNKRPDYIGAFWNVVNWEKVDELY 195
BLAST of CN189456 vs. ExPASy Swiss-Prot
Match: SODM1_STAAB (Superoxide dismutase [Mn/Fe] 1 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=sodA PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.962e-39 Identity = 83/200 (41.50%), Postives = 117/200 (58.50%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDT------STVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 706 LP LPY + ALEP E M++HH +HH YVT N AVE ++ S +Q A++ NGGGH+NHS+FW+ L+P E G I +GSLE ++ + + AA GSGW WL ++ +L + TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ ++Y Sbjct: 5 LPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVEGTDLESKSIEEIVANLDSVPANIQTAVRNNGGGHLNHSLFWELLSPNSEEKGTVVEK-----IKEQWGSLEEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPLTEGKT--PILGLDVWEHAYYLKYQNKRPDYIGAFWNVVNWEKVDELY 195 The following BLAST results are available for this feature:
BLAST of CN189456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189456 ID=CN189456; Name=CN189456; organism=Citrus sinensis; type=EST; length=728bpback to top |