CN189452
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189452 vs. ExPASy Swiss-Prot
Match: AMY1_ORYSJ (Alpha-amylase OS=Oryza sativa subsp. japonica GN=AMY1.1 PE=2 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 6.392e-20 Identity = 48/105 (45.71%), Postives = 64/105 (60.95%), Query Frame = -1 Query: 422 WRFPGGREMQGYAYILTHPGTPSVFYDHIFS-HYRQEIEALLSVRKRNKIHCRSRVEIVKAERDVYAAIIDEKVAMKLGPGHYEPPSGSQNWCFVTEGRDYKVWE 733 W FP + MQGYAYILTHPG P +FYDH F ++EIE L+S+R R IH S + I++A+ D+Y A ID KV K+GP + + + V G Y +WE Sbjct: 328 WPFPSDKVMQGYAYILTHPGNPCIFYDHFFDWGLKEEIERLVSIRNRQGIHPASELRIMEADSDLYLAEIDGKVITKIGPRYDVEHLIPEGFQVVAHGDGYAIWE 432
BLAST of CN189452 vs. ExPASy Swiss-Prot
Match: AMY5_HORVU (Alpha-amylase type B isozyme (Fragment) OS=Hordeum vulgare GN=AMY1.5 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.173e-19 Identity = 49/105 (46.67%), Postives = 65/105 (61.90%), Query Frame = -1 Query: 422 WRFPGGREMQGYAYILTHPGTPSVFYDHIFS-HYRQEIEALLSVRKRNKIHCRSRVEIVKAERDVYAAIIDEKVAMKLGPGHYEPPSGSQNWCFVTEGRDYKVWE 733 W FP R MQGYAYILTH GTP +FYDH F ++EI+ L+SV R+ IH S+++I++A+ D+ A ID KV +KLGP + + G DY VWE Sbjct: 29 WPFPSDRVMQGYAYILTHQGTPCIFYDHFFDWGPKEEIDRLVSVSTRHGIHSESKLQIIEADADLCLAEIDGKVIVKLGPRYDVGNLIPGGFEVAAHGNDYAVWE 133
BLAST of CN189452 vs. ExPASy Swiss-Prot
Match: AMY1_HORVU (Alpha-amylase type A isozyme OS=Hordeum vulgare GN=AMY1.1 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.068e-19 Identity = 53/111 (47.75%), Postives = 69/111 (62.16%), Query Frame = -1 Query: 422 WRFPGGREMQGYAYILTHPGTPSVFYDHIFS-HYRQEIEALLSVRKRNKIHCRSRVEIVKAERDVYAAIIDEKVAMKLGPGHYEP----PSGSQNWCFVT--EGRDYKVWE 733 W FP + MQGYAYILTHPG P +FYDH F+ ++ +I AL+++RKRN I S ++I+ E D Y A ID KV +K+G Y+ P+G FVT G DY VWE Sbjct: 323 WPFPSDKVMQGYAYILTHPGIPCIFYDHFFNWGFKDQIAALVAIRKRNGITATSALKILMHEGDAYVAEIDGKVVVKIG-SRYDVGAVIPAG-----FVTSAHGNDYAVWE 427
BLAST of CN189452 vs. ExPASy Swiss-Prot
Match: AMY2A_ORYSJ (Alpha-amylase isozyme 2A OS=Oryza sativa subsp. japonica GN=AMY2A PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.021e-17 Identity = 45/105 (42.86%), Postives = 61/105 (58.10%), Query Frame = -1 Query: 422 WRFPGGREMQGYAYILTHPGTPSVFYDHIFS-HYRQEIEALLSVRKRNKIHCRSRVEIVKAERDVYAAIIDEKVAMKLGPGHYEPPSGSQNWCFVTEGRDYKVWE 733 W FP + MQGYAYILTHPG P +FYDH F +++I AL++VR+RN + S ++I+ + D Y A ID KV MK+G + + G Y VWE Sbjct: 322 WPFPSDKVMQGYAYILTHPGNPCIFYDHFFDWGLKEQIAALVAVRQRNGVTATSSLKIMLHDADAYVAEIDGKVVMKIGSRYDVSSLIPPGFHLAAHGNGYAVWE 426
BLAST of CN189452 vs. ExPASy Swiss-Prot
Match: AMY2A_ORYSI (Alpha-amylase isozyme 2A OS=Oryza sativa subsp. indica GN=AMYC2 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.021e-17 Identity = 45/105 (42.86%), Postives = 61/105 (58.10%), Query Frame = -1 Query: 422 WRFPGGREMQGYAYILTHPGTPSVFYDHIFS-HYRQEIEALLSVRKRNKIHCRSRVEIVKAERDVYAAIIDEKVAMKLGPGHYEPPSGSQNWCFVTEGRDYKVWE 733 W FP + MQGYAYILTHPG P +FYDH F +++I AL++VR+RN + S ++I+ + D Y A ID KV MK+G + + G Y VWE Sbjct: 322 WPFPSDKVMQGYAYILTHPGNPCIFYDHFFDWGLKEQIAALVAVRQRNGVTATSSLKIMLHDADAYVAEIDGKVVMKIGSRYDVSSLIPPGFHLAAHGNGYAVWE 426 The following BLAST results are available for this feature:
BLAST of CN189452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189452 ID=CN189452; Name=CN189452; organism=Citrus sinensis; type=EST; length=739bpback to top |