CN189442

Overview
NameCN189442
Unique NameCN189442
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length736
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10524 contig Csv1_Contig10524:17..752. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189442 vs. ExPASy Swiss-Prot
Match: HEMH_SYNR3 (Ferrochelatase OS=Synechococcus sp. (strain RCC307) GN=hemH PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.116e-31
Identity = 64/100 (64.00%), Postives = 81/100 (81.00%), Query Frame = -1
Query:  437 KDRGINNDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPSFITDLADAVIEAL 736
            K  G +N  TLAYQSRVGPV+WL+PYT+E L ELG+KGVK L+ +P+SFVSEHIETLEEID+EY+E+A E+G+ N+ RVPAL+  P+FI  LAD V  +L
Sbjct:  223 KTLGRDNPWTLAYQSRVGPVEWLQPYTEEALEELGEKGVKELVVVPISFVSEHIETLEEIDIEYREIATEAGVSNFRRVPALDIDPTFIASLADLVETSL 322          
BLAST of CN189442 vs. ExPASy Swiss-Prot
Match: HEMH_CYAP8 (Ferrochelatase OS=Cyanothece sp. (strain PCC 8801) GN=hemH PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.043e-30
Identity = 63/94 (67.02%), Postives = 80/94 (85.11%), Query Frame = -1
Query:  437 NDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPSFITDLADAVIEAL 718
            ND+TLAYQSRVGPV+WLKPYT++ L ELG++GV+ LL +P+SFVSEHIETL+EID+EY+E+A E+GIEN+ RVPALN  P FI  LA  V ++L
Sbjct:  229 NDYTLAYQSRVGPVEWLKPYTEDALKELGEQGVQDLLVVPISFVSEHIETLQEIDIEYREVAEEAGIENFYRVPALNTHPVFIDSLAQLVTKSL 322          
BLAST of CN189442 vs. ExPASy Swiss-Prot
Match: HEMH_CYAP7 (Ferrochelatase OS=Cyanothece sp. (strain PCC 7424) GN=hemH PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.363e-30
Identity = 62/94 (65.96%), Postives = 80/94 (85.11%), Query Frame = -1
Query:  437 NDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPSFITDLADAVIEAL 718
            ND+TLAYQSRVGPV+WLKPYT++ L ELG++G+K +L IP+SFVSEHIETL+EID+EY+E+A E+GI+++ RVPALN  P FI  LA  VI +L
Sbjct:  229 NDYTLAYQSRVGPVEWLKPYTEDALKELGEQGIKEILVIPISFVSEHIETLQEIDIEYREVAEEAGIDHFQRVPALNTHPIFIDSLAQLVINSL 322          
BLAST of CN189442 vs. ExPASy Swiss-Prot
Match: HEMH_ANASP (Ferrochelatase OS=Anabaena sp. (strain PCC 7120) GN=hemH PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.035e-30
Identity = 63/94 (67.02%), Postives = 78/94 (82.98%), Query Frame = -1
Query:  437 NDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPSFITDLADAVIEAL 718
            N HTLAYQSRVGPV+WL+PYT++ L ELG +GVK L+ +P+SFVSEHIETL+EID+EY+E+A E+GI N+ RVPA N  P FI  LAD VI+AL
Sbjct:  229 NPHTLAYQSRVGPVEWLQPYTEDALKELGAQGVKDLVVVPISFVSEHIETLQEIDIEYREIAEEAGIHNFRRVPAPNTHPVFIRALADLVIDAL 322          
BLAST of CN189442 vs. ExPASy Swiss-Prot
Match: HEMH_NOSP7 (Ferrochelatase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=hemH PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.178e-30
Identity = 63/94 (67.02%), Postives = 78/94 (82.98%), Query Frame = -1
Query:  437 NDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPSFITDLADAVIEAL 718
            N HTLAYQSRVGPV+WL+PYT++ L ELG +GVK L+ +P+SFVSEHIETL+EID+EY+E+A ESGI N+ RVPA N  P FI  LA+ VI+AL
Sbjct:  229 NAHTLAYQSRVGPVEWLQPYTEDALKELGAQGVKDLVVVPISFVSEHIETLQEIDIEYREVAEESGIHNFRRVPAPNTHPVFINALAELVIDAL 322          
BLAST of CN189442 vs. ExPASy Swiss-Prot
Match: HEMH_MICAN (Ferrochelatase OS=Microcystis aeruginosa (strain NIES-843) GN=hemH PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.178e-30
Identity = 60/94 (63.83%), Postives = 80/94 (85.11%), Query Frame = -1
Query:  437 NDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPSFITDLADAVIEAL 718
            N +TLAYQSRVGPV+WLKPYT++ L ELG++G+K LL +P+SFVSEHIETL+EID+EY+E+A E+GIE++ RVPALN  P FI  L+  V+++L
Sbjct:  229 NQYTLAYQSRVGPVEWLKPYTEDALKELGEQGIKHLLVVPISFVSEHIETLQEIDIEYREVAEEAGIEHFQRVPALNTHPMFIESLSQLVVKSL 322          
BLAST of CN189442 vs. ExPASy Swiss-Prot
Match: HEMH_PROM2 (Ferrochelatase OS=Prochlorococcus marinus (strain MIT 9215) GN=hemH PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.153e-29
Identity = 61/101 (60.40%), Postives = 79/101 (78.22%), Query Frame = -1
Query:  425 GINNDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPSFITDLADAVIEALPSAL 727
            G +N HTL+YQSRVGPV+WLKPYT+EVL +LG+  V  L+ +P+SFV EHIETL+EID+EYKE+A ++GI+N+ RV ALN  P+FI  L+D VI  L   L
Sbjct:  230 GHSNPHTLSYQSRVGPVEWLKPYTEEVLADLGRSNVNDLIVVPISFVGEHIETLQEIDIEYKEIAEQAGIKNFRRVKALNTHPTFIEGLSDLVISCLEGPL 330          
BLAST of CN189442 vs. ExPASy Swiss-Prot
Match: HEMH_PROM0 (Ferrochelatase OS=Prochlorococcus marinus (strain MIT 9301) GN=hemH PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.153e-29
Identity = 61/101 (60.40%), Postives = 79/101 (78.22%), Query Frame = -1
Query:  425 GINNDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPSFITDLADAVIEALPSAL 727
            G +N HTL+YQSRVGPV+WLKPYT+EVL +LG+  V  L+ +P+SFV EHIETL+EID+EYKE+A ++GI+N+ RV ALN  P+FI  L+D VI  L   L
Sbjct:  230 GYSNPHTLSYQSRVGPVEWLKPYTEEVLADLGRSNVNDLVVVPISFVGEHIETLQEIDIEYKEIAEKAGIKNFRRVKALNTHPTFIEGLSDLVISCLEGPL 330          
BLAST of CN189442 vs. ExPASy Swiss-Prot
Match: HEMH_SYNP6 (Ferrochelatase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=hemH PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.968e-29
Identity = 62/97 (63.92%), Postives = 79/97 (81.44%), Query Frame = -1
Query:  437 GINNDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPSFITDLADAVIEAL 727
            G +N  TLAYQSRVGPV+WL+PYT++ L EL ++GVK L+ +P+SFVSEHIETLEEID+EY+E+A E+GIE + RVPALN  P FI DL+D V + L
Sbjct:  226 GRSNPWTLAYQSRVGPVEWLQPYTEDALEELAERGVKDLVVVPISFVSEHIETLEEIDIEYREIAEEAGIERFLRVPALNTHPLFIQDLSDLVEQTL 322          
BLAST of CN189442 vs. ExPASy Swiss-Prot
Match: HEMH_SYNE7 (Ferrochelatase OS=Synechococcus elongatus (strain PCC 7942) GN=hemH PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.968e-29
Identity = 62/97 (63.92%), Postives = 79/97 (81.44%), Query Frame = -1
Query:  437 GINNDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPSFITDLADAVIEAL 727
            G +N  TLAYQSRVGPV+WL+PYT++ L EL ++GVK L+ +P+SFVSEHIETLEEID+EY+E+A E+GIE + RVPALN  P FI DL+D V + L
Sbjct:  226 GRSNPWTLAYQSRVGPVEWLQPYTEDALEELAERGVKDLVVVPISFVSEHIETLEEIDIEYREIAEEAGIERFLRVPALNTHPLFIQDLSDLVEQTL 322          
The following BLAST results are available for this feature:
BLAST of CN189442 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 207
Match NameE-valueIdentityDescription
HEMH_SYNR36.116e-3164.00Ferrochelatase OS=Synechococcus sp. (strain RCC307... [more]
HEMH_CYAP81.043e-3067.02Ferrochelatase OS=Cyanothece sp. (strain PCC 8801)... [more]
HEMH_CYAP71.363e-3065.96Ferrochelatase OS=Cyanothece sp. (strain PCC 7424)... [more]
HEMH_ANASP3.035e-3067.02Ferrochelatase OS=Anabaena sp. (strain PCC 7120) G... [more]
HEMH_NOSP75.178e-3067.02Ferrochelatase OS=Nostoc punctiforme (strain ATCC ... [more]
HEMH_MICAN5.178e-3063.83Ferrochelatase OS=Microcystis aeruginosa (strain N... [more]
HEMH_PROM21.153e-2960.40Ferrochelatase OS=Prochlorococcus marinus (strain ... [more]
HEMH_PROM01.153e-2960.40Ferrochelatase OS=Prochlorococcus marinus (strain ... [more]
HEMH_SYNP61.968e-2963.92Ferrochelatase OS=Synechococcus sp. (strain ATCC 2... [more]
HEMH_SYNE71.968e-2963.92Ferrochelatase OS=Synechococcus elongatus (strain ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001N22_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001N22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189442 ID=CN189442; Name=CN189442; organism=Citrus sinensis; type=EST; length=736bp
TTTTTTTTTTTTTTTTTAGCCAATGAGCCAATGAAAACAAAATATATCAT
AAATACATTCCACAAAGATTTATATTTGATTATTTTTCAGTAACTGACGA
CCACAGCAACAAAAAGCCGCGGTATTCCCCAGTCATAAATATTCCCTCAT
TGTATCGCTAGTTTCCCGTATAAGAATAAAATAGAGAAAGACCAAAATTC
TTGAACGGTATCAGTATTTTTATCTCTCCTTGCTCAAGACGTAATATTAC
TCAAGTAAGCTTGCCTCTTAATCACCTTCAAAAGAGCTGATTCCTAAATG
CATTAATCATTCTTGGCGAGAAAAACAGAACAAATGCCAAGATCGAACCA
AAGAACATTTTGATGGCATATCTCACAGGGTTATGGTCATCCTCTTGAGA
GATATTCTTAGGGGCAGACATGGCTAATGCCGAAGGTAGAGCTTCTATTA
CTGCATCTGCCAAATCTGTGATGAAGGAAGGGGTGCAATTCAGAGCAGGT
ACACGTCCCCAATTTTCAATGCCGGATTCAAGAGCCAATTCCTTGTACTC
CATGTCAATCTCTTCAAGAGTTTCAATGTGCTCGCTCACAAAACTGACTG
GAATGGCTAGAAGACTCTTGACACCTTTCTGGCCAAGCTCCACAAGAACT
TCATCAGTGTAAGGCTTCAGCCATTTTACAGGCCCAACTCGACTCTGGTA
TGCCAAAGTATGATCATTGTTGATTCCTCTATCTTT
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