CN189442

Overview
NameCN189442
Unique NameCN189442
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length736
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189442 vs. ExPASy Swiss-Prot
Match: HEMH_BRUC2 (Ferrochelatase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=hemH PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.810e-13
Identity = 37/81 (45.68%), Postives = 53/81 (65.43%), Query Frame = -1
Query:  488 GINNDHTLA-YQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALN 727
            G+  D   A +QSR GP +WL+PYTDE + EL + GVKS+  +   FV++ +ET++EI  E  E  LE+G EN+  +P LN
Sbjct:  251 GLGEDEMRATFQSRFGPEEWLQPYTDETVKELAKNGVKSVAVLNPGFVADCLETVDEIGNEAAEEFLENGGENFSHIPCLN 331          
BLAST of CN189442 vs. ExPASy Swiss-Prot
Match: HEMH_ACIAD (Ferrochelatase OS=Acinetobacter sp. (strain ADP1) GN=hemH PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.810e-13
Identity = 39/105 (37.14%), Postives = 66/105 (62.86%), Query Frame = -1
Query:  413 NDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTP---SFITDLADAVIEALPSALAMSA 718
            +D  +++QSR G  +W+KPYTDE+L      G+KS+  +  +F ++ +ETLEE++++  EL LE+G  ++  +PALN +      +  L  A ++AL  +LA SA
Sbjct:  235 DDWAISFQSRFGKQEWVKPYTDELLTTWAANGIKSVQILSPAFSADCLETLEELEIQNAELFLEAGGTSYQYIPALNTSVEHLELLRQLLQAHLDALNYSLAYSA 339          
BLAST of CN189442 vs. ExPASy Swiss-Prot
Match: HEMH_WOLTR (Ferrochelatase OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=hemH PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.673e-12
Identity = 40/90 (44.44%), Postives = 56/90 (62.22%), Query Frame = -1
Query:  446 DHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPSFITDLADAVI 715
            D ++ YQS++GPVKWL+P T+  L+     GV  +L +P+SFVSEH ETL E+DMEYK +  +     + R+P L+    FI  LA   I
Sbjct:  252 DWSICYQSKIGPVKWLEPSTESELLRAKADGVPVVL-LPISFVSEHSETLVELDMEYKTIIKDG---YYFRIPTLSTNSLFIKCLAGLCI 337          
BLAST of CN189442 vs. ExPASy Swiss-Prot
Match: HEMH_VIBFM (Ferrochelatase OS=Vibrio fischeri (strain MJ11) GN=hemH PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.673e-12
Identity = 39/86 (45.35%), Postives = 54/86 (62.79%), Query Frame = -1
Query:  449 LAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPSFITDLADAV 706
            ++YQSR G  +WL+PYT E L  L  KG+KSL  I  +F S+ +ETLEE+  E KE+ +ESG + +  +P LN     I  +AD V
Sbjct:  230 MSYQSRFGREEWLQPYTSETLKVLAPKGIKSLDIISPAFSSDCLETLEELSEECKEIFMESGGQKYTFIPCLNDDELHIEMMADIV 315          
BLAST of CN189442 vs. ExPASy Swiss-Prot
Match: HEMH_PSEAB (Ferrochelatase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=hemH PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.673e-12
Identity = 37/85 (43.53%), Postives = 58/85 (68.24%), Query Frame = -1
Query:  455 TLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPSFITDLAD 709
            ++++QSR+G  KW++PYTD  L EL Q+GVK LL +  +FV++ IETLEEI M  +E  + +G E+   +P LN  P+++  L +
Sbjct:  247 SVSFQSRLGRAKWIEPYTDAKLDELVQRGVKRLLVMCPAFVADCIETLEEIGMRGREQFISAGGEDLVLIPCLNDHPAWVGALGE 331          
BLAST of CN189442 vs. ExPASy Swiss-Prot
Match: HEMH_OPITP (Ferrochelatase OS=Opitutus terrae (strain DSM 11246 / PB90-1) GN=hemH PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.673e-12
Identity = 36/88 (40.91%), Postives = 58/88 (65.91%), Query Frame = -1
Query:  449 HTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPSFITDLADAV 712
            H++++QSR+    WL PYTD  L  L + G+K +L +  +F+S+ +ETLEEI +  KE  +++G E++ ++P LN  P FI  LA+ V
Sbjct:  249 HSVSFQSRLVGEPWLSPYTDHELERLAKAGIKRILVLCPAFLSDCLETLEEISVAGKETFVQAGGESFTQIPCLNDQPPFIDFLANRV 336          
BLAST of CN189442 vs. ExPASy Swiss-Prot
Match: HEMH_ACTP2 (Ferrochelatase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=hemH PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.854e-12
Identity = 38/91 (41.76%), Postives = 53/91 (58.24%), Query Frame = -1
Query:  449 NNDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPSFITDLADAV 721
            N    + YQSR G  +WL+PYTDE L +L  +GVK +  I   F ++ +ETLEEI  E KE  L +G +++  +PALN     I  LA  +
Sbjct:  225 NEQWLVTYQSRFGDEEWLQPYTDETLEKLPSQGVKKIAVICAGFSADCLETLEEIAEENKENFLNAGGQSYRYIPALNANTDHINALAKLI 315          
BLAST of CN189442 vs. ExPASy Swiss-Prot
Match: HEMH_METPP (Ferrochelatase OS=Methylibium petroleiphilum (strain PM1) GN=hemH PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.728e-12
Identity = 38/99 (38.38%), Postives = 56/99 (56.57%), Query Frame = -1
Query:  410 LAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPSFITDLADAVIEALPSALAMSAP 706
            + +QSR G  KWL+PYT+  LV+L Q+G++ +      F S+ +ETLEEI  E +E  L +G E +  +P LN    +I  L+D  I  L      +AP
Sbjct:  246 VTFQSRFGKAKWLEPYTEPTLVQLAQQGIRRVDVACPGFTSDCLETLEEIAQEAREAYLHAGGETFHYIPCLNDRHEWIAALSDIAIRHLQGWPTQTAP 344          
BLAST of CN189442 vs. ExPASy Swiss-Prot
Match: HEMH_LEGPL (Ferrochelatase OS=Legionella pneumophila (strain Lens) GN=hemH PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.728e-12
Identity = 37/92 (40.22%), Postives = 56/92 (60.87%), Query Frame = -1
Query:  443 NDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPSFITDLADAVIE 718
            + +T A+QSR+G   W+KPYTDE+  EL  KG+K+++    SFV++ +ETLEEI +  KE   + G E +   P +N  P +I  +   V E
Sbjct:  238 HQYTTAFQSRLGKTPWIKPYTDEIFAELISKGIKNIVVSCPSFVADCLETLEEIGIRAKEQWEKLGGEQFILTPCMNDHPEWIKAIQSIVNE 329          
BLAST of CN189442 vs. ExPASy Swiss-Prot
Match: HEMH_LEGPH (Ferrochelatase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=hemH PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.728e-12
Identity = 37/92 (40.22%), Postives = 56/92 (60.87%), Query Frame = -1
Query:  443 NDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPSFITDLADAVIE 718
            + +T A+QSR+G   W+KPYTDE+  EL  KG+K+++    SFV++ +ETLEEI +  KE   + G E +   P +N  P +I  +   V E
Sbjct:  238 HQYTTAFQSRLGKTPWIKPYTDEIFAELISKGIKNIVVSCPSFVADCLETLEEIGIRAKEQWEKLGGEQFILTPCMNDHPEWIKAIQSIVNE 329          
The following BLAST results are available for this feature:
BLAST of CN189442 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 207
Match NameE-valueIdentityDescription
HEMH_BRUC29.810e-1345.68Ferrochelatase OS=Brucella canis (strain ATCC 2336... [more]
HEMH_ACIAD9.810e-1337.14Ferrochelatase OS=Acinetobacter sp. (strain ADP1) ... [more]
HEMH_WOLTR1.673e-1244.44Ferrochelatase OS=Wolbachia sp. subsp. Brugia mala... [more]
HEMH_VIBFM1.673e-1245.35Ferrochelatase OS=Vibrio fischeri (strain MJ11) GN... [more]
HEMH_PSEAB1.673e-1243.53Ferrochelatase OS=Pseudomonas aeruginosa (strain U... [more]
HEMH_OPITP1.673e-1240.91Ferrochelatase OS=Opitutus terrae (strain DSM 1124... [more]
HEMH_ACTP22.854e-1241.76Ferrochelatase OS=Actinobacillus pleuropneumoniae ... [more]
HEMH_METPP3.728e-1238.38Ferrochelatase OS=Methylibium petroleiphilum (stra... [more]
HEMH_LEGPL3.728e-1240.22Ferrochelatase OS=Legionella pneumophila (strain L... [more]
HEMH_LEGPH3.728e-1240.22Ferrochelatase OS=Legionella pneumophila subsp. pn... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001N22_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001N22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189442 ID=CN189442; Name=CN189442; organism=Citrus sinensis; type=EST; length=736bp
TTTTTTTTTTTTTTTTTAGCCAATGAGCCAATGAAAACAAAATATATCAT
AAATACATTCCACAAAGATTTATATTTGATTATTTTTCAGTAACTGACGA
CCACAGCAACAAAAAGCCGCGGTATTCCCCAGTCATAAATATTCCCTCAT
TGTATCGCTAGTTTCCCGTATAAGAATAAAATAGAGAAAGACCAAAATTC
TTGAACGGTATCAGTATTTTTATCTCTCCTTGCTCAAGACGTAATATTAC
TCAAGTAAGCTTGCCTCTTAATCACCTTCAAAAGAGCTGATTCCTAAATG
CATTAATCATTCTTGGCGAGAAAAACAGAACAAATGCCAAGATCGAACCA
AAGAACATTTTGATGGCATATCTCACAGGGTTATGGTCATCCTCTTGAGA
GATATTCTTAGGGGCAGACATGGCTAATGCCGAAGGTAGAGCTTCTATTA
CTGCATCTGCCAAATCTGTGATGAAGGAAGGGGTGCAATTCAGAGCAGGT
ACACGTCCCCAATTTTCAATGCCGGATTCAAGAGCCAATTCCTTGTACTC
CATGTCAATCTCTTCAAGAGTTTCAATGTGCTCGCTCACAAAACTGACTG
GAATGGCTAGAAGACTCTTGACACCTTTCTGGCCAAGCTCCACAAGAACT
TCATCAGTGTAAGGCTTCAGCCATTTTACAGGCCCAACTCGACTCTGGTA
TGCCAAAGTATGATCATTGTTGATTCCTCTATCTTT
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