CN189437

Overview
NameCN189437
Unique NameCN189437
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length680
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:1742..2425. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.226e-29
Identity = 68/130 (52.31%), Postives = 86/130 (66.15%), Query Frame = -2
Query:  293 TPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 679
            TPG+E+  + TPE +A +T++ L+  +P AVP ++FLSGGQSE EAT NLNAMNQ     PW +SFS+ RALQ + LK W G+ ENV  AQ   L R KANS A LG Y G+ +  E A E + VK Y Y
Sbjct:  272 TPGAESKDRATPEQVAAYTLKLLRNRVPPAVPGIMFLSGGQSEVEATLNLNAMNQ--APNPWHVSFSYARALQNTCLKTWGGRPENVNAAQTTLLARAKANSLAQLGKYTGEGE-SEEAKEGMFVKGYTY 398          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALDOB_SPAAU (Fructose-bisphosphate aldolase B OS=Sparus aurata GN=aldob PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 3.797e-29
Identity = 64/130 (49.23%), Postives = 84/130 (64.62%), Query Frame = -2
Query:  293 TPGSEAPK-VTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 679
            TPG   PK  TP+ +A  TV AL+RT+PA+VP + FLSGGQSEEEA+ +LNA+NQ+   +PW L+FS+GRALQ S L AW GK+ N    Q  F+ R K N  A+ G YK      + + +SL+   Y Y
Sbjct:  235 TPGHSCPKKFTPQEVAMATVTALRRTVPASVPGICFLSGGQSEEEASIHLNAINQVPLHRPWKLTFSYGRALQASALAAWQGKDANKAATQQVFVTRAKINGLASKGEYKPSGSADQASQQSLYTASYVY 364          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALDOB_BOVIN (Fructose-bisphosphate aldolase B OS=Bos taurus GN=ALDOB PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.797e-29
Identity = 66/122 (54.10%), Postives = 77/122 (63.11%), Query Frame = -2
Query:  293 KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 658
            K TPE +A  TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK EN +  Q AF+ R  ANS+A  G Y      G  + +SL    Y Y
Sbjct:  243 KYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKTTQEAFMKRALANSQAAKGQYVHMGSSGSASTQSLFTASYTY 364          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALDOA_RABIT (Fructose-bisphosphate aldolase A OS=Oryctolagus cuniculus GN=ALDOA PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 3.797e-29
Identity = 69/130 (53.08%), Postives = 87/130 (66.92%), Query Frame = -2
Query:  293 TPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 679
            TPG     K + E IA  TV AL+RT+P AV  V FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL + ++ Y
Sbjct:  235 TPGHACTQKYSHEEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFISNHAY 364          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALDOA_PANTR (Fructose-bisphosphate aldolase A OS=Pan troglodytes GN=ALDOA PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.797e-29
Identity = 69/130 (53.08%), Postives = 87/130 (66.92%), Query Frame = -2
Query:  293 TPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 679
            TPG     K + E IA  TV AL+RT+P AV  + FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL V ++ Y
Sbjct:  235 TPGHACTQKFSHEEIAMATVTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALDOA_MOUSE (Fructose-bisphosphate aldolase A OS=Mus musculus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 3.797e-29
Identity = 69/130 (53.08%), Postives = 87/130 (66.92%), Query Frame = -2
Query:  293 TPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 679
            TPG     K + E IA  TV AL+RT+P AV  V FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL + ++ Y
Sbjct:  235 TPGHACTQKFSNEEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYIKRALANSLACQGKYTPSGQSGAAASESLFISNHAY 364          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALDOA_HUMAN (Fructose-bisphosphate aldolase A OS=Homo sapiens GN=ALDOA PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 3.797e-29
Identity = 69/130 (53.08%), Postives = 87/130 (66.92%), Query Frame = -2
Query:  293 TPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 679
            TPG     K + E IA  TV AL+RT+P AV  + FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL V ++ Y
Sbjct:  235 TPGHACTQKFSHEEIAMATVTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.476e-29
Identity = 67/130 (51.54%), Postives = 87/130 (66.92%), Query Frame = -2
Query:  293 TPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 679
            TPG+E   K +PE +A+ T+  L+R +P AVP ++FLSGGQSE EAT NLNAMNQ  +  PW +SFS+ RALQ S L+ W GK E ++ +Q A LVR KANS A LG Y  + +  E A + + VK Y Y
Sbjct:  265 TPGAEHKNKASPETVADFTLTMLKRRVPPAVPGIMFLSGGQSEAEATLNLNAMNQ--SPNPWHVSFSYARALQNSVLRTWQGKPEKIEASQKALLVRAKANSLAQLGKYSAEGE-NEDAKKGMFVKGYTY 391          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALF1_LAMJA (Fructose-bisphosphate aldolase, muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.476e-29
Identity = 68/130 (52.31%), Postives = 90/130 (69.23%), Query Frame = -2
Query:  293 TPGSEAPKVT-PEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 679
            T G+ AP  T PE +A  T+ AL+RT+P AVP + FLSGGQSEE+A+ +LNA+N+L   KPW+L+FS+GRALQ S LKAW GK+EN++ AQ   + R K N +A+ G YK     G  A ESL V ++ Y
Sbjct:  235 TVGTAAPASTRPEQVAMATLTALRRTVPPAVPGITFLSGGQSEEDASIHLNAINKLHLIKPWALTFSYGRALQASVLKAWGGKKENLKAAQDELMRRAKINGQASKGEYK-PTGTGAAAGESLFVANHAY 363          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALDOC_CHICK (Fructose-bisphosphate aldolase C (Fragment) OS=Gallus gallus GN=ALDOC PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.476e-29
Identity = 66/130 (50.77%), Postives = 84/130 (64.62%), Query Frame = -2
Query:  293 TPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 679
            TPG   P K +PE IA  TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N     +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A LG Y+G       A +SL+V ++ Y
Sbjct:    8 TPGHSCPTKYSPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASINLNAINTCPLVRPWALTFSYGRALQASALSAWRGQRDNANAATEEFVKRAEVNGLAALGKYEGSGDDSGAAGQSLYVANHAY 137          
The following BLAST results are available for this feature:
BLAST of CN189437 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALFC2_ARATH2.226e-2952.31Probable fructose-bisphosphate aldolase 2, chlorop... [more]
ALDOB_SPAAU3.797e-2949.23Fructose-bisphosphate aldolase B OS=Sparus aurata ... [more]
ALDOB_BOVIN3.797e-2954.10Fructose-bisphosphate aldolase B OS=Bos taurus GN=... [more]
ALDOA_RABIT3.797e-2953.08Fructose-bisphosphate aldolase A OS=Oryctolagus cu... [more]
ALDOA_PANTR3.797e-2953.08Fructose-bisphosphate aldolase A OS=Pan troglodyte... [more]
ALDOA_MOUSE3.797e-2953.08Fructose-bisphosphate aldolase A OS=Mus musculus G... [more]
ALDOA_HUMAN3.797e-2953.08Fructose-bisphosphate aldolase A OS=Homo sapiens G... [more]
ALFC3_ARATH6.476e-2951.54Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALF1_LAMJA6.476e-2952.31Fructose-bisphosphate aldolase, muscle type OS=Lam... [more]
ALDOC_CHICK6.476e-2950.77Fructose-bisphosphate aldolase C (Fragment) OS=Gal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001N18_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001N18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189437 ID=CN189437; Name=CN189437; organism=Citrus sinensis; type=EST; length=680bp
TTTTTTTTTTTTTTTTTAGCACAAGAAAACATTATCAATCATGTGACAAA
ATCACAGAAATTTAGCGCCATTAGGGGAACATGAAAAAAAAAACAAAAAC
AAAAGCATAAACAGTTTTCAGTTTAGTTTTGATCAAAACCACTCAAACCG
AAGTTCCCAAGCTTTTTATTGCTCCACCTAATATGAAAAAGCCCTAAAAC
TATGAATGAGAATGTGCCAACCTAATGTTCATACCGCCATTTACTCTCAT
AAAGTTCATAAAGCACAACACCCAAAGCTTCAACTGGGCTTAGTATTTGT
AGTCCTTGACATGGAGAGACTCTGCGGCACCTTCACCAAGCTGGGCATCG
CCCTTGTAAGTACCGAGGGTAGCCTCAGAGTTGGCCTTGCACCTGACAAG
GAAAGCAGCCTGGGCCTTCTGCACATTCTCTTCCTTTCCAGCCCATGCCT
TGAGAGTGCTCTGCTGAAGTGCACGTCCAAAGGAAAAGGAAAGTGACCAT
GGCTTCTTCGTCTTGAGCTGGTTCATGGCATTAAGGTTGCGGGTAGCCTC
CTCCTCACTCTGCCCACCAGACAAGAACACAACAGCAGGAACTGCTGCAG
GCATAGTGCGTTGCAGGGCCCGGACAGTGTGTTCAGCAATCACCTCCGGT
GTAACTTTGGGAGCTTCAGATCCAGGGGTC
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