CN189437

Overview
NameCN189437
Unique NameCN189437
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length680
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:1742..2425. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALF2_LAMJA (Fructose-bisphosphate aldolase, non-muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 9.352e-28
Identity = 61/122 (50.00%), Postives = 82/122 (67.21%), Query Frame = -2
Query:  293 KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 658
            + +P+ +A  TV AL+RT+P+AVP + FLSGGQSEE+A+ NLNA+NQL  ++PW+LSFS+GRALQ S LKAWAG   N+  A+  F  R   N  A  G Y      G  A+ESL + ++ Y
Sbjct:  243 RCSPQEVAMATVTALRRTVPSAVPGITFLSGGQSEEDASLNLNAINQLPLERPWALSFSYGRALQASVLKAWAGAPANIPAAKKEFEKRAAINGLAAQGKYVPAGSSGSAASESLFIANHNY 364          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALDOB_PONAB (Fructose-bisphosphate aldolase B OS=Pongo abelii GN=ALDOB PE=2 SV=3)

HSP 1 Score: 123.635 bits (309), Expect = 9.352e-28
Identity = 64/122 (52.46%), Postives = 75/122 (61.48%), Query Frame = -2
Query:  293 KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 658
            K TPE +A  TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK  N +  Q AF+ R  AN +A  G Y      G  + +SL    Y Y
Sbjct:  243 KYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAANKEATQEAFMKRAVANHQAAKGQYVHTGSSGAASTQSLFTACYTY 364          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 3.554e-27
Identity = 64/117 (54.70%), Postives = 80/117 (68.38%), Query Frame = -2
Query:  332 TPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGE 679
            TPG+E+  K +P  +AE+T+  L R +P AVP ++FLSGGQSE EAT NLNAMN  K+  PW +SFS+ RALQ + LK W G  ENV+ AQ A L R K+NS A LG Y GD +  E
Sbjct:  224 TPGAESKDKASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN--KSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYIGDGESEE 338          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALDOB_RAT (Fructose-bisphosphate aldolase B OS=Rattus norvegicus GN=Aldob PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 3.554e-27
Identity = 62/122 (50.82%), Postives = 76/122 (62.30%), Query Frame = -2
Query:  293 KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 658
            K TPE +A  TV AL RT+PAAVP++ FLSGG SEE+AT NLNA+ +    +PW LSFS+GRALQ S L AW GK  N +  Q AF+ R  AN +A  G Y      G  + +SL    Y Y
Sbjct:  243 KYTPEQVAMATVTALHRTVPAAVPSICFLSGGMSEEDATLNLNAIYRCPLPRPWKLSFSYGRALQASALAAWGGKAANKKATQEAFMKRAVANCQAAQGQYVHTGSSGAASTQSLFTASYTY 364          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALF_SCHMA (Fructose-bisphosphate aldolase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.350e-26
Identity = 67/132 (50.76%), Postives = 86/132 (65.15%), Query Frame = -2
Query:  293 TPGSEAPKV-TPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGD--AQLGEGAAESLHVKDYKY 679
            T G    K  TP+  A  TVRALQRT+P AVP + FLSGGQSE +AT+NLN +N++   KPW+L+FSFGRALQ S L  W GK+ENV  AQ   L   KAN  A +G ++G+    LG+   +SL V ++ Y
Sbjct:  235 TAGQACKKAYTPQENALATVRALQRTVPPAVPGITFLSGGQSELDATKNLNEINKIPGPKPWALTFSFGRALQASVLATWKGKKENVHAAQEELLKLAKANGAAAVGKFEGNMGTTLGD---KSLFVANHAY 363          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALF2_PLABA (Fructose-bisphosphate aldolase 2 OS=Plasmodium berghei (strain Anka) GN=ALDO2 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.008e-26
Identity = 66/122 (54.10%), Postives = 81/122 (66.39%), Query Frame = -2
Query:  293 KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 658
            K   + I   TVR L+RT+P A+P V FLSGGQSEE+A+ NLN++N L    PW+L+FS+GRALQ S L  W GK+ENV KA+   L R +ANS AT G YKG A  G  A  SL+ K Y Y
Sbjct:  239 KTKTDDIGFFTVRTLRRTVPPALPGVAFLSGGQSEEDASINLNSINVLGPH-PWALTFSYGRALQASVLNTWQGKKENVAKARRVLLQRAEANSLATYGKYKGGAG-GSTAGASLYEKKYVY 358          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALDOC_CARAU (Fructose-bisphosphate aldolase C OS=Carassius auratus GN=aldoc PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 7.410e-25
Identity = 65/130 (50.00%), Postives = 81/130 (62.31%), Query Frame = -2
Query:  293 TPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 679
            T G   P K + + IA  TV AL+RT+P AV  V FLSGGQSEEEA+ NLNA+N     KPW+L+FS+GRALQ S L AW G +EN + A   FL R +AN  A  G Y      G  A +SL+V ++ Y
Sbjct:  235 TAGHSCPTKFSNQEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINNCPLTKPWALTFSYGRALQASALSAWRGVKENEKAATEEFLKRAEANGLAAQGKYVSSGMDG-SAGQSLYVANHAY 363          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALDCB_DANRE (Fructose-bisphosphate aldolase C-B OS=Danio rerio GN=aldocb PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.816e-24
Identity = 63/130 (48.46%), Postives = 79/130 (60.77%), Query Frame = -2
Query:  293 TPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 679
            T G   P K + E IA  TV AL+RT+P AV  V FLSGGQSEEEA+ NLN++N     KPW L+FS+GRALQ S L AW G + N + A   F+ R +AN  A  G Y      G  A +SL+V ++ Y
Sbjct:  235 TAGHSCPTKYSSEEIAMATVTALRRTVPPAVSGVTFLSGGQSEEEASVNLNSINNCPLAKPWPLTFSYGRALQASALSAWRGAKSNEKAATEEFIKRAEANGLAAQGKYVSSGTCG-AAGQSLYVANHAY 363          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALDCA_DANRE (Fructose-bisphosphate aldolase C-A OS=Danio rerio GN=aldoca PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.816e-24
Identity = 62/130 (47.69%), Postives = 78/130 (60.00%), Query Frame = -2
Query:  293 TPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 679
            TPG   P K + E +A  TV AL+RT+P AV  V FLSGGQSEEEA+ NL+A+N  +  KPW+L+FSFGRALQ S LK W G+ EN   A   F+ R + NS A+ G Y            S ++  Y Y
Sbjct:  235 TPGHGCPTKYSAEEVAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLSAINNCRLVKPWALTFSFGRALQASALKTWRGQRENEAAATEEFIKRAEINSLASQGKYTVCGDSSGATGLSHYLSSYAY 364          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALF_LYMST (Fructose-bisphosphate aldolase (Fragment) OS=Lymnaea stagnalis PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.310e-23
Identity = 55/85 (64.71%), Postives = 63/85 (74.12%), Query Frame = -2
Query:  428 TPGSEAPK-VTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEE 679
            T G   PK  TPE IA  TV AL RT+PAAV  + FLSGGQSEE+AT NLNA+NQ   +KPW L+FS+GRALQ S LKAW GK+E
Sbjct:   16 TAGQGCPKKYTPEDIARATVTALNRTVPAAVAGITFLSGGQSEEDATINLNAINQFPGRKPWPLTFSYGRALQASVLKAWGGKDE 100          
The following BLAST results are available for this feature:
BLAST of CN189437 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF2_LAMJA9.352e-2850.00Fructose-bisphosphate aldolase, non-muscle type OS... [more]
ALDOB_PONAB9.352e-2852.46Fructose-bisphosphate aldolase B OS=Pongo abelii G... [more]
ALFC2_PEA3.554e-2754.70Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALDOB_RAT3.554e-2750.82Fructose-bisphosphate aldolase B OS=Rattus norvegi... [more]
ALF_SCHMA1.350e-2650.76Fructose-bisphosphate aldolase OS=Schistosoma mans... [more]
ALF2_PLABA3.008e-2654.10Fructose-bisphosphate aldolase 2 OS=Plasmodium ber... [more]
ALDOC_CARAU7.410e-2550.00Fructose-bisphosphate aldolase C OS=Carassius aura... [more]
ALDCB_DANRE2.816e-2448.46Fructose-bisphosphate aldolase C-B OS=Danio rerio ... [more]
ALDCA_DANRE2.816e-2447.69Fructose-bisphosphate aldolase C-A OS=Danio rerio ... [more]
ALF_LYMST5.310e-2364.71Fructose-bisphosphate aldolase (Fragment) OS=Lymna... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001N18_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001N18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189437 ID=CN189437; Name=CN189437; organism=Citrus sinensis; type=EST; length=680bp
TTTTTTTTTTTTTTTTTAGCACAAGAAAACATTATCAATCATGTGACAAA
ATCACAGAAATTTAGCGCCATTAGGGGAACATGAAAAAAAAAACAAAAAC
AAAAGCATAAACAGTTTTCAGTTTAGTTTTGATCAAAACCACTCAAACCG
AAGTTCCCAAGCTTTTTATTGCTCCACCTAATATGAAAAAGCCCTAAAAC
TATGAATGAGAATGTGCCAACCTAATGTTCATACCGCCATTTACTCTCAT
AAAGTTCATAAAGCACAACACCCAAAGCTTCAACTGGGCTTAGTATTTGT
AGTCCTTGACATGGAGAGACTCTGCGGCACCTTCACCAAGCTGGGCATCG
CCCTTGTAAGTACCGAGGGTAGCCTCAGAGTTGGCCTTGCACCTGACAAG
GAAAGCAGCCTGGGCCTTCTGCACATTCTCTTCCTTTCCAGCCCATGCCT
TGAGAGTGCTCTGCTGAAGTGCACGTCCAAAGGAAAAGGAAAGTGACCAT
GGCTTCTTCGTCTTGAGCTGGTTCATGGCATTAAGGTTGCGGGTAGCCTC
CTCCTCACTCTGCCCACCAGACAAGAACACAACAGCAGGAACTGCTGCAG
GCATAGTGCGTTGCAGGGCCCGGACAGTGTGTTCAGCAATCACCTCCGGT
GTAACTTTGGGAGCTTCAGATCCAGGGGTC
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