CN189437

Overview
NameCN189437
Unique NameCN189437
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length680
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:1742..2425. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALF_TRYBB (Fructose-bisphosphate aldolase, glycosomal OS=Trypanosoma brucei brucei GN=ALD PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 5.871e-22
Identity = 54/108 (50.00%), Postives = 69/108 (63.89%), Query Frame = -2
Query:  356 PGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTY 676
            PG+E+  K   E +AE+TV+ L R +P A+P V FLSGG SE  A+  LNAMN     +PW L+FS+ RALQ S +K W GKE  V+  + AF+ R K NS A LG Y
Sbjct:  246 PGAESGLKGHAEQVAEYTVKTLARVIPPALPGVTFLSGGLSEVMASEYLNAMNNCPLPRPWKLTFSYARALQSSAIKRWGGKESGVEAGRRAFMHRAKMNSLAQLGKY 353          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFA (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa GN=XF_0826 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.088e-19
Identity = 52/111 (46.85%), Postives = 73/111 (65.77%), Query Frame = -2
Query:  350 PGSEAPK-VTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 676
            PG++  +  + + +AE TV  L+ T+PA +P +VFLSGGQ++ ++T +LNAMNQL    PW LSFS+GRA+QQ+ LK W+   + N  KAQ     R K N  A LG +KG
Sbjct:  225 PGTDCEEQASIDEVAESTVMCLKSTVPAILPGIVFLSGGQTDAQSTAHLNAMNQL-DPLPWPLSFSYGRAMQQAALKLWSQDMKGNFAKAQQVVYERAKENGLAALGKWKG 334          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALF1_XANAC (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas axonopodis pv. citri GN=XAC3344 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.727e-19
Identity = 51/100 (51.00%), Postives = 66/100 (66.00%), Query Frame = -2
Query:  350 EVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 646
            E +AE TV  L+ T+PA +P +VFLSGGQ++E++T +LN M+QL    PW LSFS+GRA+QQ+ LK WA     N  KAQ     R K N  A LG +KG
Sbjct:  236 EEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQL-GNLPWPLSFSYGRAMQQAALKLWAKDMTGNFAKAQQVIYERAKENGLAALGKWKG 334          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFT (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=PD_1845 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.076e-19
Identity = 51/111 (45.95%), Postives = 72/111 (64.86%), Query Frame = -2
Query:  350 PGSEAPK-VTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 676
            PG++  +  + + +AE TV  L+ T+PA +P +VFLSGGQ++ ++T +LNAMNQ     PW LSFS+GRA+QQ+ LK W+   + N  KAQ     R K N  A LG +KG
Sbjct:  225 PGTDCEEQASIDEVAESTVMCLKSTVPAILPGIVFLSGGQTDAQSTAHLNAMNQF-DPLPWPLSFSYGRAMQQAALKLWSQDMKGNFAKAQQVVYERAKENGLAALGKWKG 334          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALF1_XANCP (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas campestris pv. campestris GN=XCC3185 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.935e-19
Identity = 50/100 (50.00%), Postives = 66/100 (66.00%), Query Frame = -2
Query:  350 EVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 646
            E +AE TV  L+ T+PA +P +VFLSGGQ++E++T +LN M+QL    PW LSFS+GRA+QQ+ LK W+     N  KAQ     R K N  A LG +KG
Sbjct:  236 EEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQL-GNLPWPLSFSYGRAMQQAALKLWSKDMTGNYAKAQQIIYERAKENGLAALGKWKG 334          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.938e-18
Identity = 56/130 (43.08%), Postives = 76/130 (58.46%), Query Frame = -2
Query:  293 TPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 679
            TPG++   K  P  +AE+T++ L    P  VP ++FLSGGQSE E+T NLNAMNQ  +  PW +SFS+ RAL  + LK W      VQ  + A   R KANS+A  G Y    + G+ AA+ ++ K   Y
Sbjct:  248 TPGADCKNKAGPAKVAEYTLKMLAARAPP-VPGIMFLSGGQSELESTLNLNAMNQ--SPNPWHVSFSYARALTNTVLKTWQASPRTVQAPRLAAQAR-KANSDAQQGKYDATTE-GKEAAQGMYEKGKGY 372          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 5.143e-18
Identity = 53/116 (45.69%), Postives = 70/116 (60.34%), Query Frame = -2
Query:  332 PGS-EAPKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGE 676
            PG+  A K  PE +A++ ++ L R     VP ++ LSGGQSE EAT NLNAMNQ  +  PW +SFS+ RALQ + LK W   +ENV+    A     K+NS A LG Y G+ +  E
Sbjct:  271 PGALSARKGPPEQVADYPLKLLHRRRGPVVPGIMVLSGGQSEVEATLNLNAMNQ--SPNPWHVSFSYARALQNTCLKTWVEGQENVKAQDFAC---AKSNSLAQLGKYTGEGESEE 381          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALF_ENCCU (Fructose-bisphosphate aldolase OS=Encephalitozoon cuniculi GN=ECU01_0240 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.686e-16
Identity = 40/87 (45.98%), Postives = 55/87 (63.22%), Query Frame = -2
Query:  398 KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFL 658
            K TP+ +A  T+RAL  T+P  +P +VFLSGG   E+A   LNA+N  +  + WSLSFSF RAL    L+ W G + N+++AQ   L
Sbjct:  234 KYTPKKVATFTLRALLSTIPCGIPGIVFLSGGHGSEDAIGFLNAINMERGCRTWSLSFSFARALTDGVLETWRGDDSNIEEAQKILL 320          
The following BLAST results are available for this feature:
BLAST of CN189437 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF_TRYBB5.871e-2250.00Fructose-bisphosphate aldolase, glycosomal OS=Tryp... [more]
ALF1_XYLFA2.088e-1946.85Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XANAC2.727e-1951.00Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XYLFT6.076e-1945.95Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XANCP7.935e-1950.00Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALFC_CHLRE3.938e-1843.08Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALFC_SPIOL5.143e-1845.69Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALF_ENCCU3.686e-1645.98Fructose-bisphosphate aldolase OS=Encephalitozoon ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001N18_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001N18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189437 ID=CN189437; Name=CN189437; organism=Citrus sinensis; type=EST; length=680bp
TTTTTTTTTTTTTTTTTAGCACAAGAAAACATTATCAATCATGTGACAAA
ATCACAGAAATTTAGCGCCATTAGGGGAACATGAAAAAAAAAACAAAAAC
AAAAGCATAAACAGTTTTCAGTTTAGTTTTGATCAAAACCACTCAAACCG
AAGTTCCCAAGCTTTTTATTGCTCCACCTAATATGAAAAAGCCCTAAAAC
TATGAATGAGAATGTGCCAACCTAATGTTCATACCGCCATTTACTCTCAT
AAAGTTCATAAAGCACAACACCCAAAGCTTCAACTGGGCTTAGTATTTGT
AGTCCTTGACATGGAGAGACTCTGCGGCACCTTCACCAAGCTGGGCATCG
CCCTTGTAAGTACCGAGGGTAGCCTCAGAGTTGGCCTTGCACCTGACAAG
GAAAGCAGCCTGGGCCTTCTGCACATTCTCTTCCTTTCCAGCCCATGCCT
TGAGAGTGCTCTGCTGAAGTGCACGTCCAAAGGAAAAGGAAAGTGACCAT
GGCTTCTTCGTCTTGAGCTGGTTCATGGCATTAAGGTTGCGGGTAGCCTC
CTCCTCACTCTGCCCACCAGACAAGAACACAACAGCAGGAACTGCTGCAG
GCATAGTGCGTTGCAGGGCCCGGACAGTGTGTTCAGCAATCACCTCCGGT
GTAACTTTGGGAGCTTCAGATCCAGGGGTC
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