CN189435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A1_ORYSJ (Eukaryotic initiation factor 4A-1 OS=Oryza sativa subsp. japonica GN=Os06g0701100 PE=2 SV=2) HSP 1 Score: 350.132 bits (897), Expect = 6.633e-96 Identity = 174/194 (89.69%), Postives = 186/194 (95.88%), Query Frame = 3 Query: 129 MAGLAPEGSQFDARQYDTKMNELLST-DGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 MAG+APEGSQFDA+ YD+KM ELL+ + ++FFTSYDEV++SFD MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY +V+CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL +GVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE Sbjct: 1 MAGMAPEGSQFDAKHYDSKMQELLNQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYAVVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 194
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A_WHEAT (Eukaryotic initiation factor 4A OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 348.591 bits (893), Expect = 1.930e-95 Identity = 174/194 (89.69%), Postives = 186/194 (95.88%), Query Frame = 3 Query: 129 MAGLAPEGSQFDARQYDTKMNELLST-DGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 MAG+APEGSQFDA+ YD+KM ELLS + ++FFTSYDEV++SFD MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLV+CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL +GVHVVVGTPGRVFD++RRQSLRPD IKMFVLDEADE Sbjct: 1 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDIVRRQSLRPDNIKMFVLDEADE 194
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A_MAIZE (Eukaryotic initiation factor 4A OS=Zea mays PE=2 SV=1) HSP 1 Score: 348.591 bits (893), Expect = 1.930e-95 Identity = 175/193 (90.67%), Postives = 184/193 (95.34%), Query Frame = 3 Query: 129 MAGLAPEGSQFDARQYDTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 MAGLAPEGSQFD +QYD KM E+L+ +DFFTSYD+V +SFD+MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLV+CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL +GVHVVVGTPGRVFDMLRRQSLRPD IKMFVLDEADE Sbjct: 1 MAGLAPEGSQFDDKQYDKKMQEILT---EDFFTSYDDVCESFDSMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDNIKMFVLDEADE 190
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A2_ARATH (Eukaryotic initiation factor 4A-2 OS=Arabidopsis thaliana GN=TIF4A-2 PE=1 SV=1) HSP 1 Score: 348.591 bits (893), Expect = 1.930e-95 Identity = 176/194 (90.72%), Postives = 185/194 (95.36%), Query Frame = 3 Query: 129 MAGLAPEGSQFDARQYDTKMNELLSTDGQD-FFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 MAG APEG+QFD RQ+D ++NE+L DGQD FFTSYDEV++SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY L+QCQALVLAPTRELAQQIEKVMRALGDY GVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPD IKMFVLDEADE Sbjct: 1 MAGSAPEGTQFDTRQFDQRLNEVL--DGQDEFFTSYDEVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADE 192
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A1_ARATH (Eukaryotic initiation factor 4A-1 OS=Arabidopsis thaliana GN=TIF4A-1 PE=1 SV=1) HSP 1 Score: 345.895 bits (886), Expect = 1.251e-94 Identity = 174/194 (89.69%), Postives = 186/194 (95.88%), Query Frame = 3 Query: 129 MAGLAPEGSQFDARQYDTKMNELLSTDGQD-FFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 MAG APEG+QFDARQ+D K+NE+L +GQD FFTSYD+V++SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLD+ L+QCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDML+RQSLR D IKMFVLDEADE Sbjct: 1 MAGSAPEGTQFDARQFDQKLNEVL--EGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADE 192
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A3_ARATH (Eukaryotic initiation factor 4A-3 OS=Arabidopsis thaliana GN=TIF4A-3 PE=1 SV=1) HSP 1 Score: 327.405 bits (838), Expect = 4.604e-89 Identity = 162/194 (83.51%), Postives = 179/194 (92.27%), Query Frame = 3 Query: 129 MAGLAPEGSQFDARQYDTKMNELLSTDGQD-FFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 MAG+A +G+Q+D RQ+DTKMN +L +G++ F+T+YDEV DSFDAM LQ +LLRGIYAYGFEKPSAIQQRGI+PFCKGLDVIQQAQSGTGKTATFCSG+LQQLD LVQCQALVLAPTRELAQQIEKVMRALGDYLGVK ACVGGTSVREDQR+LQ+GVHVVVGTPGRVFD+LRRQSLR D IKMFVLDEADE Sbjct: 1 MAGMASDGTQYDPRQFDTKMNAILGEEGEETFYTNYDEVCDSFDAMELQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDISLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVLQSGVHVVVGTPGRVFDLLRRQSLRADAIKMFVLDEADE 194
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A_DROME (Eukaryotic initiation factor 4A OS=Drosophila melanogaster GN=eIF-4a PE=2 SV=3) HSP 1 Score: 228.024 bits (580), Expect = 3.801e-59 Identity = 110/161 (68.32%), Postives = 134/161 (83.23%), Query Frame = 3 Query: 225 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 +++ EVYD+FD M L+E LLRGIY YGFEKPSAIQQR I+P +G DVI QAQSGTGKTATF ILQQ+D + +CQAL+LAPTRELA QI++V+ ALG+Y+ V HAC+GGT+VRED RIL++G HVVVGTPGRV+DM+ R+ LR YIK+FVLDEADE Sbjct: 23 STWHEVYDNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQSGTGKTATFSIAILQQIDTSIRECQALILAPTRELATQIQRVVMALGEYMKVHSHACIGGTNVREDARILESGCHVVVGTPGRVYDMINRKVLRTQYIKLFVLDEADE 183
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A_SCLS1 (ATP-dependent RNA helicase eIF4A OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=tif1 PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.724e-57 Identity = 108/161 (67.08%), Postives = 132/161 (81.99%), Query Frame = 3 Query: 225 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 ++YDE DSFD M L+ LLRG+YAYGFE+PSAIQQR I+P KG DVI QAQSGTGKTATF +LQ+LD + QCQAL+LAPTRELAQQI+KV+ A+GD++ V+ HAC+GGTSVR+D + LQ G VVVGTPGRV DM++R+ L+ D +KMFVLDEADE Sbjct: 18 SNYDETVDSFDTMNLKPELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQKLDPNVKQCQALILAPTRELAQQIQKVVVAIGDFMNVECHACIGGTSVRDDMKALQDGPQVVVGTPGRVHDMIQRRFLKTDSMKMFVLDEADE 178
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A_BOTFB (ATP-dependent RNA helicase eIF4A OS=Botryotinia fuckeliana (strain B05.10) GN=tif1 PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.724e-57 Identity = 108/161 (67.08%), Postives = 132/161 (81.99%), Query Frame = 3 Query: 225 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 ++YDE DSFD M L+ LLRG+YAYGFE+PSAIQQR I+P KG DVI QAQSGTGKTATF +LQ+LD + QCQAL+LAPTRELAQQI+KV+ A+GD++ V+ HAC+GGTSVR+D + LQ G VVVGTPGRV DM++R+ L+ D +KMFVLDEADE Sbjct: 18 SNYDETVDSFDTMNLKPELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQKLDPNVKQCQALILAPTRELAQQIQKVVVAIGDFMNVECHACIGGTSVRDDMKALQDGPQVVVGTPGRVHDMIQRRFLKTDSMKMFVLDEADE 178
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A2_CHICK (Eukaryotic initiation factor 4A-II OS=Gallus gallus GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 3.558e-57 Identity = 112/162 (69.14%), Postives = 133/162 (82.10%), Query Frame = 3 Query: 225 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQA-GVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 ++++E+ D+FD M L+E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQL+ L + QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + + LQA H+VVGTPGRVFDML R+ L P +IKMFVLDEADE Sbjct: 26 SNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIDLKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADE 187 The following BLAST results are available for this feature:
BLAST of CN189435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189435 ID=CN189435; Name=CN189435; organism=Citrus sinensis; type=EST; length=709bpback to top |