CN189435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: RH2_ARATH (DEAD-box ATP-dependent RNA helicase 2 OS=Arabidopsis thaliana GN=RH2 PE=2 SV=2) HSP 1 Score: 179.874 bits (455), Expect = 1.187e-44 Identity = 88/157 (56.05%), Postives = 117/157 (74.52%), Query Frame = 3 Query: 237 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 E SF+ MG++E++LRG+Y YGFEKPSAIQQR ++P +G DVI QAQSGTGKT+ + Q +D + QAL+L+PTRELA Q EK ++A+G + ++ HAC+GG SV ED R L+ GVHVV GTPGRV DM++R+SLR IK+ +LDE+DE Sbjct: 32 EPITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIALSVCQVVDTSSREVQALILSPTRELATQTEKTIQAIGLHANIQAHACIGGNSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDE 188
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A3_NICPL (Eukaryotic initiation factor 4A-3 OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.550e-44 Identity = 89/153 (58.17%), Postives = 115/153 (75.16%), Query Frame = 3 Query: 249 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 SF MG++++LLRG+Y YGFEKPSAIQQR ++P G DVI QAQSGTGKT+ + Q +D + QAL+L+PTRELA Q EKV+ A+GDY+ V+ HAC+GG SV ED R L+ GV VV GTPGRV DM++R++LR IK+ +LDE+DE Sbjct: 19 SFAEMGIKDDLLRGVYQYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMIALTVCQIVDTKSSEVQALILSPTRELAAQTEKVILAIGDYINVQAHACIGGKSVGEDIRKLEHGVQVVSGTPGRVCDMIKRRTLRTRGIKLLILDESDE 171
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: FAL1_CANAL (ATP-dependent RNA helicase FAL1 OS=Candida albicans GN=FAL1 PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.454e-44 Identity = 86/157 (54.78%), Postives = 118/157 (75.16%), Query Frame = 3 Query: 237 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 +V+ +F++M L+ +LL+GIYAYGFE PSAIQ R I+ G D I QAQSGTGKTATF G+L+ +D +CQAL+L+PTRELA QI+ V++ LGDY+ + HAC+GG +V ED + LQ G +V GTPGRV D+++R++L+ IK+ +LDEADE Sbjct: 23 KVHRTFESMNLKPDLLKGIYAYGFETPSAIQSRAIMQIISGRDTIAQAQSGTGKTATFSIGMLEVIDTKSKECQALILSPTRELAIQIQNVVKHLGDYMNIHTHACIGGKNVGEDVKKLQQGQQIVSGTPGRVIDVIKRRNLQTRNIKVLILDEADE 179
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A_VANPO (ATP-dependent RNA helicase eIF4A OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=TIF1 PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 4.511e-44 Identity = 92/161 (57.14%), Postives = 117/161 (72.67%), Query Frame = 3 Query: 225 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 T+YD+V FD M L++ LL+G+Y YGFE+PSAIQQR I+P + DV+ QAQSGTGKT TF LQ++D + QAL+LAPTRELA QI+KV+ AL ++ VKVHAC+GGTS ED L+ +VVGTPGRV D ++R + D IKMF+LDEADE Sbjct: 16 TNYDKVVYKFDDMNLKDELLKGVYGYGFEEPSAIQQRAILPIVEEHDVLAQAQSGTGKTGTFSIAALQRIDSSIKAPQALILAPTRELALQIQKVVIALAFHMDVKVHACIGGTSFVEDTEGLK-DAQIVVGTPGRVSDNIQRHRFKTDNIKMFILDEADE 175
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: FAL1_LODEL (ATP-dependent RNA helicase FAL1 OS=Lodderomyces elongisporus GN=FAL1 PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 7.695e-44 Identity = 87/157 (55.41%), Postives = 117/157 (74.52%), Query Frame = 3 Query: 237 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 +V+ +F++M L+ LL+GIYAYGFE PSAIQ R I+ G D I QAQSGTGKTATF G+L+ LD +CQALVL+PTRELA QI+ V++ LGDY+ ++ +AC+GG +V D + LQ G +V GTPGRV D+++R++L +IKM +LDEADE Sbjct: 23 KVHRTFESMRLKPELLKGIYAYGFEAPSAIQSRAIMQIISGRDTIAQAQSGTGKTATFSIGMLEVLDSKSKECQALVLSPTRELATQIQNVIKHLGDYMNIQTYACIGGKNVGTDIKRLQQGQQIVSGTPGRVLDVIKRRNLSTRHIKMLILDEADE 179
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: FAL1_ASHGO (ATP-dependent RNA helicase FAL1 OS=Ashbya gossypii GN=FAL1 PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.313e-43 Identity = 90/156 (57.69%), Postives = 112/156 (71.79%), Query Frame = 3 Query: 240 VYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 V +F++M LQENLLRGIY YGFE PSAIQ R I +G DVI QAQSGTGKTATF G+LQ +D QALVL+PTRELA QI +V+R LGDY+ V AC GG ++++D + G HV+ GTPGRV DM++R+ + ++KM VLDEADE Sbjct: 21 VSPTFESMKLQENLLRGIYGYGFEAPSAIQSRAITQIIRGKDVIAQAQSGTGKTATFTIGMLQVIDSSSKDLQALVLSPTRELAAQISQVVRNLGDYMNVVALACTGGKALQQDISKVNKGCHVMSGTPGRVLDMIKRRIINTRHVKMLVLDEADE 176
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A_LEIBR (Probable eukaryotic initiation factor 4A OS=Leishmania braziliensis GN=LbrM01_V2.0740 PE=3 SV=2) HSP 1 Score: 171.4 bits (433), Expect = 4.222e-42 Identity = 90/156 (57.69%), Postives = 114/156 (73.08%), Query Frame = 3 Query: 249 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHAC---VGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 SFD M L +NLLRGIY+YGFEKPS+IQQR I PF +G D+I QAQSGTGKT F G+LQ+LD+ Q LVL+PTRELA Q +V+ +G++L C VGGT V++D R LQAGV V VGTPGRV D+++R +LR + +++ VLDEADE Sbjct: 27 SFDDMPLHQNLLRGIYSYGFEKPSSIQQRAIAPFTRGGDIIAQAQSGTGKTGAFSIGLLQRLDFRHNLIQGLVLSPTRELALQTAEVISRIGEFLSNSAKFCETFVGGTRVQDDLRKLQAGVVVAVGTPGRVSDVIKRGALRTESLRVLVLDEADE 182
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A_LEIMA (Probable eukaryotic initiation factor 4A OS=Leishmania major GN=LMJ_0078 PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 7.202e-42 Identity = 90/156 (57.69%), Postives = 114/156 (73.08%), Query Frame = 3 Query: 249 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHAC---VGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 SFD M L +NLLRGIY+YGFEKPS+IQQR I PF +G D+I QAQSGTGKT F G+LQ+LD+ Q LVL+PTRELA Q +V+ +G++L C VGGT V++D R LQAGV V VGTPGRV D+++R +LR + +++ VLDEADE Sbjct: 27 SFDDMPLHQNLLRGIYSYGFEKPSSIQQRAIAPFTRGGDIIAQAQSGTGKTGAFSIGLLQRLDFRHNLIQGLVLSPTRELALQTAEVISRIGEFLSNSSKFCETFVGGTRVQDDLRKLQAGVIVAVGTPGRVSDVIKRGALRTESLRVLVLDEADE 182
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A_LEIIN (Probable eukaryotic initiation factor 4A OS=Leishmania infantum GN=LinJ01.0780 PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 7.202e-42 Identity = 90/156 (57.69%), Postives = 114/156 (73.08%), Query Frame = 3 Query: 249 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHAC---VGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 SFD M L +NLLRGIY+YGFEKPS+IQQR I PF +G D+I QAQSGTGKT F G+LQ+LD+ Q LVL+PTRELA Q +V+ +G++L C VGGT V++D R LQAGV V VGTPGRV D+++R +LR + +++ VLDEADE Sbjct: 27 SFDDMPLHQNLLRGIYSYGFEKPSSIQQRAIAPFTRGGDIIAQAQSGTGKTGAFSIGLLQRLDFRHNLIQGLVLSPTRELALQTAEVISRIGEFLSNSSKFCETFVGGTRVQDDLRKLQAGVIVAVGTPGRVSDVIKRGALRTESLRVLVLDEADE 182
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: RH34_ARATH (DEAD-box ATP-dependent RNA helicase 34 OS=Arabidopsis thaliana GN=RH34 PE=2 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 1.605e-41 Identity = 80/153 (52.29%), Postives = 111/153 (72.55%), Query Frame = 3 Query: 249 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 SFD MG+ + +LRG+Y YG++KPS IQQR +VP KG DVI QAQSGTGKT+ + Q ++ + Q LVL+P+RELA Q EK ++A+G + ++ HAC+GG S+ ED + L+ GVH V GTPGRV+DM++R SL+ +K+ VLDE+DE Sbjct: 23 SFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAISVCQIVNISSRKVQVLVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKSIGEDIKKLERGVHAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDE 175 The following BLAST results are available for this feature:
BLAST of CN189435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189435 ID=CN189435; Name=CN189435; organism=Citrus sinensis; type=EST; length=709bpback to top |