CN189435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: FAL1_CANGA (ATP-dependent RNA helicase FAL1 OS=Candida glabrata GN=FAL1 PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.317e-40 Identity = 85/154 (55.19%), Postives = 112/154 (72.73%), Query Frame = 3 Query: 249 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED-QRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 +F++M L+E LLRGIY+YGFE PSAIQ R I G DVI QAQSGTGKTATF G+LQ +D QALVL+PTRELA QI KV+ LGDY+ VK +A GG ++++D ++I + G V+ GTPGRV DM++R+ + ++++ VLDEADE Sbjct: 24 TFESMDLKEGLLRGIYSYGFEAPSAIQSRAITQIISGKDVIAQAQSGTGKTATFTIGMLQAIDLKKHDLQALVLSPTRELAAQIGKVVTNLGDYMNVKAYAMTGGKTMKDDLKKIQKHGCQVISGTPGRVLDMIKRRLIETRHVQILVLDEADE 177
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: FAL1_KLULA (ATP-dependent RNA helicase FAL1 OS=Kluyveromyces lactis GN=FAL1 PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.026e-40 Identity = 87/157 (55.41%), Postives = 108/157 (68.79%), Query Frame = 3 Query: 237 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 +V +F++M L+ +LLRGIY YGFE PS+IQ R I G DVI QAQSGTGKTATF G+LQ +D + QALVL+PTRELA Q E V+ LGDYL V HAC GG ++++D + + VV GTPGRV DM++RQ L K+ VLDEADE Sbjct: 20 KVSATFESMNLKPDLLRGIYFYGFEYPSSIQSRAISQIISGKDVIAQAQSGTGKTATFTIGLLQAIDSKSKELQALVLSPTRELASQSESVISNLGDYLNVTAHACTGGKALQQDIKKVSKNCQVVSGTPGRVLDMIKRQVLNVRNCKILVLDEADE 176
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A_TRYCR (Probable eukaryotic initiation factor 4A OS=Trypanosoma cruzi GN=Tc00.1047053511585.190 PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 6.741e-40 Identity = 87/157 (55.41%), Postives = 113/157 (71.97%), Query Frame = 3 Query: 249 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVK----VHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 SFD M L +NLLRGIY++GFEKPS+IQQR IVPF +G D+I QAQSGTGKT F G+LQ+LD+ Q LVL+PTRELA Q +V+ +G++L VGGT V++D R LQAG V VGTPGRV D+ +R ++R +++++ VLDEADE Sbjct: 27 SFDDMPLHQNLLRGIYSHGFEKPSSIQQRAIVPFTRGGDIIAQAQSGTGKTGAFSIGLLQRLDFRHNVLQGLVLSPTRELALQTAEVITRIGEFLAEGNSSFCATFVGGTRVQDDYRKLQAGSIVAVGTPGRVVDVTKRGAMRTEHLRVLVLDEADE 183
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A_TRYBB (Probable eukaryotic initiation factor 4A OS=Trypanosoma brucei brucei GN=Tb09.160.3270 PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.150e-39 Identity = 86/157 (54.78%), Postives = 113/157 (71.97%), Query Frame = 3 Query: 249 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHA----CVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 SFD M L +NLLRGIY++GFEKPS+IQQR IVPF +G D+I QAQSGTGKT F G+LQ+LD+ Q LVL+PTRELA Q +V+ +G++L + VGGT V++D R LQ+G V VGTPGRV D+ +R ++R + +++ VLDEADE Sbjct: 27 SFDDMPLHQNLLRGIYSHGFEKPSSIQQRAIVPFTRGGDIIAQAQSGTGKTGAFSIGLLQRLDFRHNVLQGLVLSPTRELAMQTAEVITRIGEFLAEGSSSFCATFVGGTRVQDDYRKLQSGTIVAVGTPGRVVDVTKRGAMRTESLRVLVLDEADE 183
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: FAL1_YEAST (ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae GN=FAL1 PE=1 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.502e-39 Identity = 83/158 (52.53%), Postives = 112/158 (70.89%), Query Frame = 3 Query: 237 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQA-GVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 +V +F++M L+++LLRGIY+YGFE PS+IQ R I G DVI QAQSGTGKTATF G+LQ +D QAL+L+PTRELA QI +V++ LGDY+ V A GG ++++D + +Q G V GTPGRV DM+++Q L+ ++M VLDEADE Sbjct: 20 KVSSTFESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLLQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYMNVNAFAITGGKTLKDDLKKMQKHGCQAVSGTPGRVLDMIKKQMLQTRNVQMLVLDEADE 177
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: FAL1_YEAS7 (ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae (strain YJM789) GN=FAL1 PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.502e-39 Identity = 83/158 (52.53%), Postives = 112/158 (70.89%), Query Frame = 3 Query: 237 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQA-GVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 +V +F++M L+++LLRGIY+YGFE PS+IQ R I G DVI QAQSGTGKTATF G+LQ +D QAL+L+PTRELA QI +V++ LGDY+ V A GG ++++D + +Q G V GTPGRV DM+++Q L+ ++M VLDEADE Sbjct: 20 KVSSTFESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLLQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYMNVNAFAITGGKTLKDDLKKMQKHGCQAVSGTPGRVLDMIKKQMLQTRNVQMLVLDEADE 177
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: FAL1_VANPO (ATP-dependent RNA helicase FAL1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=FAL1 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.961e-39 Identity = 84/158 (53.16%), Postives = 110/158 (69.62%), Query Frame = 3 Query: 237 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED-QRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 ++ +F++M L+++LLRGIY YGFE PSAIQ R I G DVI QAQSGTGKTATF G+LQ +D QALVL+PTRELA QI +V+ LGDY+ V+ +A GG ++++D R+ + G VV GTPGRV DM +R L ++M +LDEADE Sbjct: 20 KISPTFESMNLKDDLLRGIYGYGFEAPSAIQSRAITQIISGTDVIAQAQSGTGKTATFTIGMLQAIDLKRKDLQALVLSPTRELASQINQVVSNLGDYMNVQSYAMTGGKTMKDDLNRMQKNGCQVVSGTPGRVLDMFKRHLLNTRNVQMLILDEADE 177
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A2_ORYSJ (Putative eukaryotic initiation factor 4A-2 OS=Oryza sativa subsp. japonica GN=Os02g0221300 PE=3 SV=2) HSP 1 Score: 160.614 bits (405), Expect = 7.453e-39 Identity = 87/194 (44.85%), Postives = 116/194 (59.79%), Query Frame = 3 Query: 126 DMAGLAPEGSQFDARQYDTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 D +AP ++++ T ++++T G F + E+L+ +KPSA+ QRGIVP C GLD+IQQ+ GT T T C GILQ+LDY +CQALVL PT +LA + + V+ LG +L K HA GGTS EDQ+IL GV V VGTP V ML+ ++L PD+I+MFVLDEADE Sbjct: 24 DSNSIAPSAIAINSKKKQTT-KDIVTTQGAQF---------------ISESLIGETQTKDLDKPSAVHQRGIVPLCNGLDIIQQSLFGT--TVTLCCGILQRLDYASTECQALVLVPTHDLAHETQNVIGVLGQFLSAKAHAFCGGTSAHEDQQILSTGVQVAVGTPCHVLGMLQGRALCPDHIRMFVLDEADE 199
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: FAL1_PHANO (ATP-dependent RNA helicase FAL1 OS=Phaeosphaeria nodorum GN=FAL1 PE=3 SV=3) HSP 1 Score: 158.688 bits (400), Expect = 2.832e-38 Identity = 90/165 (54.55%), Postives = 105/165 (63.64%), Query Frame = 3 Query: 216 DFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 +F TS + V +F+AM L+ENLLRGIYAYG+E PSA+Q R IV CKG D I QAQSGTGKTATF ILQ V+ LGDY+ V+ HAC+GGT+V ED R L G HVV GTPGRV DM+RR++LR IKM VLDEADE Sbjct: 14 EFSTSKEVTVAPTFEAMHLKENLLRGIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISILQS-------------------------VIMGLGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVSGTPGRVADMIRRRNLRTRNIKMLVLDEADE 153
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A_ENCCU (ATP-dependent RNA helicase eIF4A OS=Encephalitozoon cuniculi GN=TIF1 PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.174e-30 Identity = 79/184 (42.93%), Postives = 106/184 (57.61%), Query Frame = 3 Query: 162 DARQYDTKMNEL--LSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 D R T++ E L +D +S ++D+++ GL+E+LL+GIY+ GFE PS IQ+ I P G D+ QAQSGTGKT F LQ D Q LVLA TRE+A Q LG ++G +V GG+ + D+ L+ H+VVGTPGRV M+ L D IK+FV+DEADE Sbjct: 13 DTRSSGTEIREFEDLRSD-----SSQIRMFDTWEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPIIDGRDIRAQAQSGTGKTGAFAVAALQICDMSQDVTQILVLASTREIAAQNAARFEDLGCFMGARVALLSGGSPIAADKVALEKKPHIVVGTPGRVEHMININELSMDNIKLFVIDEADE 191 The following BLAST results are available for this feature:
BLAST of CN189435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189435 ID=CN189435; Name=CN189435; organism=Citrus sinensis; type=EST; length=709bpback to top |