CN189435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DHH1_PICST (ATP-dependent RNA helicase DHH1 OS=Pichia stipitis GN=DHH1 PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.174e-30 Identity = 72/153 (47.06%), Postives = 97/153 (63.40%), Query Frame = 3 Query: 249 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 SF+ L+ LL GI+ GFEKPS IQ+ I G DV+ +A++GTGKTA+F LQQ+ L + QAL+L PTRELA Q +V+R LG +LG++ GGTS+++D L VHV+VGTPGRV D+ R +FV+DEAD+ Sbjct: 31 SFEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDVLARAKNGTGKTASFIIPSLQQIKPKLNKIQALILVPTRELALQTSQVVRTLGKHLGIQCMVTTGGTSLKDDILRLNDPVHVLVGTPGRVLDLAARSVADLSECPLFVMDEADK 183
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DHH1_CHAGB (ATP-dependent RNA helicase DHH1 OS=Chaetomium globosum GN=DHH1 PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.708e-30 Identity = 67/152 (44.08%), Postives = 97/152 (63.82%), Query Frame = 3 Query: 252 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 F+ GL+ +LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L++++ + + Q L+L PTRELA Q +V + LG +LG+ V GGT +R+D LQ VH+VVGTPGR+ D+ +Q MF++DEAD+ Sbjct: 13 FEDFGLKRDLLMGIFEAGFEKPSPIQEESIPVALVGRDILARAKNGTGKTAAFVIPALEKINPKVSKIQCLILVPTRELAMQTSQVCKTLGKHLGINVMVTTGGTGLRDDIVRLQDPVHIVVGTPGRILDLAGKQVADLSECPMFIMDEADK 164
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DHH1_MAGGR (ATP-dependent RNA helicase DHH1 OS=Magnaporthe grisea GN=DHH1 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.079e-29 Identity = 66/152 (43.42%), Postives = 96/152 (63.16%), Query Frame = 3 Query: 252 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 F+ GL+ +LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L+ ++ + + Q L+L PTRELA Q +V + LG +LG+ V GGT++R+D LQ VH+VVGTPGR+ D+ + MF++DEAD+ Sbjct: 38 FENFGLKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVVPALETINPKVSKIQCLILVPTRELAMQTSQVCKTLGKHLGINVMVTTGGTTLRDDILRLQDPVHIVVGTPGRILDLAGKNVADLSECPMFIMDEADK 189
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DHH1_CANAL (ATP-dependent RNA helicase DHH1 OS=Candida albicans GN=DHH1 PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.840e-29 Identity = 74/181 (40.88%), Postives = 108/181 (59.67%), Query Frame = 3 Query: 177 DTKMNELLSTDGQDFFTSYDEVYD----SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 DT + L+ +D ++V + SF+ L+ LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA+F LQ + L + QAL+L PTRELA Q +V+R LG ++G + GGTS+R+D L VH++VGTPGRV D+ R+ + +FV+DEAD+ Sbjct: 3 DTNWKQNLNLPPKDTRPQTEDVLNTKGKSFEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPCLQLVKPKLNKVQALILVPTRELALQTSQVVRTLGKHVGTQCMVTTGGTSLRDDIVRLHDPVHILVGTPGRVLDLAARKVVDLSECPLFVMDEADK 183
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DHH1_PICGU (ATP-dependent RNA helicase DHH1 OS=Pichia guilliermondii GN=DHH1 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.403e-29 Identity = 69/153 (45.10%), Postives = 95/153 (62.09%), Query Frame = 3 Query: 249 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 SF+ GL+ LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA+F LQQ+ L + Q L+L PTRELA Q +V++ LG +L ++ GGT +R+D L VH++VGTPGRV D+ R MFV+DEAD+ Sbjct: 30 SFEEFGLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPALQQVKTKLNKIQVLILVPTRELALQTSQVVKTLGKHLKLQCMVTTGGTLLRDDVMRLDEPVHILVGTPGRVLDLAARSIADFSECPMFVMDEADK 182
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DHH1_GIBZE (ATP-dependent RNA helicase DHH1 OS=Gibberella zeae GN=DHH1 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.099e-29 Identity = 65/152 (42.76%), Postives = 95/152 (62.50%), Query Frame = 3 Query: 252 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 F+ L+ +LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L++++ + + Q L+L PTRELA Q +V + LG +LG+ V GGT +R+D LQ VH+VVGTPGR+ D+ + MF++DEAD+ Sbjct: 44 FENFALKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKISKIQCLILVPTRELAMQTSQVCKTLGKHLGINVMVTTGGTGLRDDIIRLQDPVHIVVGTPGRILDLAGKNVADLSECPMFIMDEADK 195
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DHH1_DEBHA (ATP-dependent RNA helicase DHH1 OS=Debaryomyces hansenii GN=DHH1 PE=3 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 4.099e-29 Identity = 69/153 (45.10%), Postives = 97/153 (63.40%), Query Frame = 3 Query: 249 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 +F+ L+ LL GI+ GFEKPS +Q+ I G D++ +A++GTGKTA+F LQQ + + QAL+L PTRELA Q +V+R LG +LG++ GGTS+R+D L VHV+VGTPGRV D+ R+ +FV+DEAD+ Sbjct: 31 TFEDFPLKRELLMGIFEAGFEKPSPVQEESIPMALAGRDILARAKNGTGKTASFVIPCLQQARPKVNKIQALILVPTRELALQTSQVVRTLGKHLGLQCMVTTGGTSLRDDILRLNDPVHVLVGTPGRVLDLASRKVADLSECPLFVMDEADK 183
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DHH1_CANGA (ATP-dependent RNA helicase DHH1 OS=Candida glabrata GN=DHH1 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.193e-28 Identity = 68/154 (44.16%), Postives = 96/154 (62.34%), Query Frame = 3 Query: 246 DSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 +SF+ L+ LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L+++ L + QAL++ PTRELA Q +V+R LG + GV GGT++R+D L VHV+VGTPGRV D+ R+ +FV+DEAD+ Sbjct: 31 NSFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKIKPKLNKIQALIMVPTRELALQTSQVIRTLGRHCGVSCMVTTGGTNLRDDILRLNETVHVLVGTPGRVLDLASRKVADLSECSLFVMDEADK 184
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: RH12_ARATH (DEAD-box ATP-dependent RNA helicase 12 OS=Arabidopsis thaliana GN=RH12 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.558e-28 Identity = 65/154 (42.21%), Postives = 96/154 (62.34%), Query Frame = 3 Query: 246 DSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 + F+ L+ +LL+GIY GFEKPS IQ+ I G D++ +A++GTGKT FC +L+++D QA++L PTRELA Q +V + L YL ++V GGTS+R+D L VH++VGTPGR+ D+ ++ M V+DEAD+ Sbjct: 124 NEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEKIDPNNNVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADK 277
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DHH1_YARLI (ATP-dependent RNA helicase DHH1 OS=Yarrowia lipolytica GN=DHH1 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.558e-28 Identity = 67/152 (44.08%), Postives = 96/152 (63.16%), Query Frame = 3 Query: 252 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 F+ L+ LL GI+ GFE PS IQ+ I G D++ +A++GTGKTA F LQQ++ + + QAL++ PTRELA Q +V + LG +LG+KV GGT++R+D L+ VHV+VGTPGRV D+ + MF++DEAD+ Sbjct: 30 FEDFFLKRELLMGIFEAGFENPSPIQEEAIPIALAGRDILARAKNGTGKTAAFVIPALQQVNPKVNKIQALIMVPTRELALQTSQVCKTLGKHLGIKVMVTTGGTNLRDDIMRLEDTVHVLVGTPGRVLDLAGKGVADLSESPMFIMDEADK 181 The following BLAST results are available for this feature:
BLAST of CN189435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189435 ID=CN189435; Name=CN189435; organism=Citrus sinensis; type=EST; length=709bpback to top |