CN189435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DHH1_ASPOR (ATP-dependent RNA helicase dhh1 OS=Aspergillus oryzae GN=dhh1 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.248e-26 Identity = 67/181 (37.02%), Postives = 101/181 (55.80%), Query Frame = 3 Query: 177 DTKMNELLSTDGQDFFTSYDEVYDS----FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 DT+ + L +D ++V + F+ ++ L+ GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L++++ + QAL+L PTRELA Q V + LG +LG+ V GGT + +D L VH++VGTPGRV D+ + FV+DEAD+ Sbjct: 20 DTRWKDQLKAPAKDARPQTEDVTATKGLEFEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSHVCKTLGKHLGINVMVTTGGTGLMDDIIRLNDAVHILVGTPGRVLDLASKGVADLSECPTFVMDEADK 200
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DHH1_ASHGO (ATP-dependent RNA helicase DHH1 OS=Ashbya gossypii GN=DHH1 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.242e-26 Identity = 63/154 (40.91%), Postives = 94/154 (61.04%), Query Frame = 3 Query: 246 DSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 ++F+ L+ LL GI+ GFE+PS IQ+ I D++ +A++GTGKTA F L+ + + + QAL++ PTRELA Q +V+R LG + G+ GGT++R+D L VHV+VGTPGRV D+ R+ +FV+DEAD+ Sbjct: 29 NTFEDFYLRRELLMGIFEAGFERPSPIQEEAIPIALARRDILARAKNGTGKTAAFVIPTLEIVKPKVNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDIMRLNEPVHVLVGTPGRVLDLASRKVADLSECSLFVMDEADK 182
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DHH1_NEOFI (ATP-dependent RNA helicase dhh1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dhh1 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.540e-26 Identity = 62/152 (40.79%), Postives = 91/152 (59.87%), Query Frame = 3 Query: 252 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 F+ ++ L+ GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L++++ + QAL+L PTRELA Q +V + LG +LG+ V GGT + +D L VH++VGTPGRV D+ + FV+DEAD+ Sbjct: 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSQVCKTLGKHLGINVMVTTGGTGLMDDIIRLNDAVHILVGTPGRVLDLASKGVADLSECPTFVMDEADK 200
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DHH1_ASPFU (ATP-dependent RNA helicase dhh1 OS=Aspergillus fumigatus GN=dhh1 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.540e-26 Identity = 62/152 (40.79%), Postives = 91/152 (59.87%), Query Frame = 3 Query: 252 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 F+ ++ L+ GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L++++ + QAL+L PTRELA Q +V + LG +LG+ V GGT + +D L VH++VGTPGRV D+ + FV+DEAD+ Sbjct: 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSQVCKTLGKHLGINVMVTTGGTGLMDDIIRLNDAVHILVGTPGRVLDLASKGVADLSECPTFVMDEADK 200
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: CGH1_CAEEL (ATP-dependent RNA helicase cgh-1 OS=Caenorhabditis elegans GN=cgh-1 PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.540e-26 Identity = 58/152 (38.16%), Postives = 93/152 (61.18%), Query Frame = 3 Query: 252 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 F+ L +LL GI+ G+EKPS IQ+ I G D++ +A++GTGKT +C +++++ L QA+V+ PTRELA Q ++ L ++ +KV GGT +R+D L VH+V+ TPGR+ D++ + + ++ K VLDEAD+ Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIMRLNGTVHLVIATPGRILDLMEKGVAKMEHCKTLVLDEADK 196
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DBP5_SCLS1 (ATP-dependent RNA helicase dbp5 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=dbp5 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.236e-26 Identity = 75/190 (39.47%), Postives = 114/190 (60.00%), Query Frame = 3 Query: 150 GSQFDARQYDTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLDYGLVQC-QALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEAD 704 G QY+ E+ +D Q TS D+F+ +G+ ++L+G+YA F+KPS IQ++ + P G ++I Q+QSGTGKTA F IL +LD+ QAL LAP+RELA+QIE V+R++G ++ G+ V A + G +R + V+VGTPG V D+++R+S+ +K+ LDEAD Sbjct: 40 GGTLQDGQYEV---EVKLSDIQGDQTSPLYSVDTFEQLGIDASILKGLYAMNFKKPSKIQEKAL-PLLLGNPPTNMIAQSQSGTGKTAAFVITILSRLDFSKPTTPQALCLAPSRELARQIEGVVRSIGQFVEGLSVQAAIPGAV----ERNARVNAMVIVGTPGTVMDLIKRKSIDASQMKVLCLDEAD 221
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: Y2316_STAA8 (Probable DEAD-box ATP-dependent RNA helicase SAOUHSC_02316 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_02316 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.105e-25 Identity = 60/153 (39.22%), Postives = 96/153 (62.75%), Query Frame = 3 Query: 249 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 +F +G+ +N ++ + + GF++P+ IQ+ I +G+D++ QAQ+GTGKT F +++++ G Q+L+LAPTRELA Q+ + +R GV+V GG + + L+ G +VVGTPGRV D L R++L+ D I +LDEADE Sbjct: 3 NFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIEKV-VGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADE 154
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: Y2168_STAAR (Probable DEAD-box ATP-dependent RNA helicase SAR2168 OS=Staphylococcus aureus (strain MRSA252) GN=SAR2168 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.105e-25 Identity = 60/153 (39.22%), Postives = 96/153 (62.75%), Query Frame = 3 Query: 249 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 +F +G+ +N ++ + + GF++P+ IQ+ I +G+D++ QAQ+GTGKT F +++++ G Q+L+LAPTRELA Q+ + +R GV+V GG + + L+ G +VVGTPGRV D L R++L+ D I +LDEADE Sbjct: 3 NFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIEKV-VGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADE 154
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: Y2081_STAAM (Probable DEAD-box ATP-dependent RNA helicase SAV2081 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV2081 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.105e-25 Identity = 60/153 (39.22%), Postives = 96/153 (62.75%), Query Frame = 3 Query: 249 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 +F +G+ +N ++ + + GF++P+ IQ+ I +G+D++ QAQ+GTGKT F +++++ G Q+L+LAPTRELA Q+ + +R GV+V GG + + L+ G +VVGTPGRV D L R++L+ D I +LDEADE Sbjct: 3 NFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIEKV-VGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADE 154
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: Y2072_STAAC (Probable DEAD-box ATP-dependent RNA helicase SACOL2072 OS=Staphylococcus aureus (strain COL) GN=SACOL2072 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.105e-25 Identity = 60/153 (39.22%), Postives = 96/153 (62.75%), Query Frame = 3 Query: 249 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 +F +G+ +N ++ + + GF++P+ IQ+ I +G+D++ QAQ+GTGKT F +++++ G Q+L+LAPTRELA Q+ + +R GV+V GG + + L+ G +VVGTPGRV D L R++L+ D I +LDEADE Sbjct: 3 NFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIEKV-VGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADE 154 The following BLAST results are available for this feature:
BLAST of CN189435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189435 ID=CN189435; Name=CN189435; organism=Citrus sinensis; type=EST; length=709bpback to top |