CN189435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A_ASPCL (ATP-dependent RNA helicase eIF4A OS=Aspergillus clavatus GN=tif1 PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 3.012e-56 Identity = 106/161 (65.84%), Postives = 132/161 (81.99%), Query Frame = 3 Query: 225 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 ++YDE+ DSFD+M L+ LLRGIYAYGFE+PSAIQQR I+P KG DVI QAQSGTGKTATF LQ++D L CQAL+LAPTRELAQQI+KV+ A+GD++ ++ HAC+GGT+VRED + LQ G VVVGTPGRV DM++R+ LR D +K+F+LDEADE Sbjct: 18 SNYDEITDSFDSMDLKPELLRGIYAYGFERPSAIQQRAIMPIIKGSDVIAQAQSGTGKTATFSISALQKIDPNLKACQALILAPTRELAQQIQKVVVAIGDFMSLECHACIGGTNVREDMKALQDGPQVVVGTPGRVQDMIQRRVLRTDQMKLFILDEADE 178
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A_CHAGB (ATP-dependent RNA helicase eIF4A OS=Chaetomium globosum GN=TIF1 PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 3.934e-56 Identity = 105/161 (65.22%), Postives = 131/161 (81.37%), Query Frame = 3 Query: 225 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 ++YDE DSFD M L+ LLRGIYAYGFE+PSAIQQR I+P KG DVI QAQSGTGKTATF +LQ++D + CQAL+LAPTRELAQQI+KV+ A+GD++ ++ HAC+GGTSVR+D + LQ G V+VGTPGRV DM++R+ L+ D +KMFVLDEADE Sbjct: 17 SNYDETVDSFDDMNLKSELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQKIDPTVKSCQALILAPTRELAQQIQKVVIAIGDFMNIECHACIGGTSVRDDMKALQDGPQVIVGTPGRVHDMIQRRILKTDQMKMFVLDEADE 177
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A2_MACFA (Eukaryotic initiation factor 4A-II OS=Macaca fascicularis GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 5.138e-56 Identity = 110/161 (68.32%), Postives = 131/161 (81.37%), Query Frame = 3 Query: 225 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQA-GVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEAD 704 ++++E+ D+FD M L+E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQL+ + QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + + LQA H+VVGTPGRVFDML R+ L P +IKMFVLDEAD Sbjct: 27 SNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEAD 187
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A_CRYPV (Eukaryotic initiation factor 4A OS=Cryptosporidium parvum GN=EIF4-A PE=2 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.495e-55 Identity = 106/161 (65.84%), Postives = 129/161 (80.12%), Query Frame = 3 Query: 225 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 ++YDE+ + F+A+ L+ +LLRGI+AYGFEKPSAIQQRGI P G D I QAQSGTGKTATF LQ++DY L CQ L+LAPTRELAQQI+KV ALGDY ++ HACVGGTSVR+D L++GVH+VVGTPGRVFDML + LR D +K+F+LDEADE Sbjct: 24 SNYDEIVECFEALNLEGDLLRGIFAYGFEKPSAIQQRGIKPILDGYDTIGQAQSGTGKTATFVIAALQKIDYSLNACQVLLLAPTRELAQQIQKVALALGDYCELRCHACVGGTSVRDDMNKLKSGVHMVVGTPGRVFDMLDKGYLRVDNLKLFILDEADE 184
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A_CAEEL (Eukaryotic initiation factor 4A OS=Caenorhabditis elegans GN=inf-1 PE=2 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 3.330e-55 Identity = 112/177 (63.28%), Postives = 135/177 (76.27%), Query Frame = 3 Query: 177 DTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 D ++ ++ DG +YD+V +SFD M L+E LLRGIY +GFEKPSAIQ+R IVP G DVI QAQSGTGKTATF ILQ++D+ QALV+APTRELAQQI+KVM ALG+YL V + C+GGTSVR+DQR L+AG+HVVVGTPGRV DM+ R +L IKMFVLDEADE Sbjct: 7 DVNVSSVVDADGL-IEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADE 182
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A_YARLI (ATP-dependent RNA helicase eIF4A OS=Yarrowia lipolytica GN=TIF1 PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 4.349e-55 Identity = 103/171 (60.23%), Postives = 130/171 (76.02%), Query Frame = 3 Query: 195 LLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 L D T+YDEV SFD +GL++ LLRGIY YGFE PS+IQQR I+P KG DV+ QAQSGTGKTATF LQ +D + + QAL++APTRELA QI+KV+ A G+Y+ ++ HAC+GGTSV ED R++Q GVHV+VGTPGR+ DM+ R+ L+ D IKMF+LDEADE Sbjct: 5 LTDIDSSQITTNYDEVVTSFDDLGLKDELLRGIYGYGFENPSSIQQRAILPVIKGNDVLAQAQSGTGKTATFSISALQNIDEKIKKPQALIIAPTRELAHQIQKVVLAFGEYMKIECHACIGGTSVAEDIRVIQEGVHVIVGTPGRIHDMIERRILKTDLIKMFILDEADE 175
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A1_PONAB (Eukaryotic initiation factor 4A-I OS=Pongo abelii GN=EIF4A1 PE=2 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 4.349e-55 Identity = 109/162 (67.28%), Postives = 128/162 (79.01%), Query Frame = 3 Query: 225 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR-EDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 ++++E+ DS D M L E+LLRGIYAYGFEKPSAIQQR I+ KG DVI QAQSGTGKTATF ILQQ++ L QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR E Q++ H++VGTPGRVFDML R+ L P YIKMFVLDEADE Sbjct: 25 SNWNEIVDSLDDMNLSESLLRGIYAYGFEKPSAIQQRAILSCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADE 186
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A_EMENI (ATP-dependent RNA helicase eIF4A OS=Emericella nidulans GN=tif1 PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 9.689e-55 Identity = 100/161 (62.11%), Postives = 131/161 (81.37%), Query Frame = 3 Query: 225 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 ++YDE+ DSFD+M L+ LLRG+YAYGFE+PSAIQQR I+P KG DVI QAQSGTGKTATF LQ+LD + CQAL++APTRELAQQI+KV+ A+GD++ ++ HAC+GGT+VR+D L+ G +VVGTPGR+ DM++R+ L+ D +KMF+LDEADE Sbjct: 41 SNYDEITDSFDSMELKPELLRGVYAYGFERPSAIQQRAILPIVKGNDVIAQAQSGTGKTATFSISALQKLDPNVKACQALIVAPTRELAQQIQKVVIAIGDFMNIQCHACIGGTAVRDDMNALREGPQIVVGTPGRIHDMIQRRVLKTDQMKMFILDEADE 201
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A_ASPNC (ATP-dependent RNA helicase eIF4A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=tif1 PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 9.689e-55 Identity = 102/161 (63.35%), Postives = 129/161 (80.12%), Query Frame = 3 Query: 225 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 T+YDEV DSFD+M L+ LLRG+YAYGFE+PSAIQQR I P G DVI QAQSGTGKTATF LQ++D L CQAL++APTRELAQQI+KV+ A+GD++ ++ HAC+GGT+VR+D L+AG VVVGTPGR+ DM+ R+ L+ D +K+F+LDEADE Sbjct: 18 TNYDEVTDSFDSMDLKPELLRGVYAYGFERPSAIQQRAIKPIIAGHDVIAQAQSGTGKTATFSISALQKIDQELKACQALIVAPTRELAQQIQKVVVAIGDFMNIECHACIGGTNVRDDMNALRAGPQVVVGTPGRIHDMIERRVLKTDQMKLFILDEADE 178
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A3_XENTR (Eukaryotic initiation factor 4A-III OS=Xenopus tropicalis GN=eif4a3 PE=2 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 2.819e-54 Identity = 111/165 (67.27%), Postives = 130/165 (78.79%), Query Frame = 3 Query: 216 DFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 +F TS + +V +FD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATFC +LQ LD + + QAL+LAPTRELA QI+KV+ ALGDY+ V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR IKM VLDEADE Sbjct: 31 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADE 195 The following BLAST results are available for this feature:
BLAST of CN189435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189435 ID=CN189435; Name=CN189435; organism=Citrus sinensis; type=EST; length=709bpback to top |