CN189435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DDX54_DICDI (ATP-dependent RNA helicase ddx54 OS=Dictyostelium discoideum GN=helA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.333e-16 Identity = 51/153 (33.33%), Postives = 83/153 (54.25%), Query Frame = 3 Query: 252 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-DYG-LVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEAD 704 F +M L +NLL+ I GF P+ IQ++ I G D++ A++G+GKT F ++Q+L D+ V +A++L+PTRELA Q KV++ ++ VGG S+ + L +++ TPGR+ L + ++ V DEAD Sbjct: 232 FQSMDLTKNLLKAILKKGFNVPTPIQRKSIPMILDGHDIVGMARTGSGKTGAFVIPMIQKLGDHSTTVGVRAVILSPTRELAIQTFKVVKDFSQGTQLRTILIVGGDSMEDQFTDLARNPDIIIATPGRLMHHLLETGMSLSKVQYIVFDEAD 384
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DDX49_MOUSE (Probable ATP-dependent RNA helicase DDX49 OS=Mus musculus GN=Ddx49 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.333e-16 Identity = 58/152 (38.16%), Postives = 78/152 (51.32%), Query Frame = 3 Query: 252 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLR-RQSLRPDYIKMFVLDEAD 704 F +GL L+ G ++P+ +Q I +G D + A++G+GKTA F ILQ+L LVL PTRELA QI + R LG LG+K VGG + L HVV+ TPGR+ D LR + I+ V+DEAD Sbjct: 4 FAEIGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFNMKKIQFLVMDEAD 155
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DDX49_HUMAN (Probable ATP-dependent RNA helicase DDX49 OS=Homo sapiens GN=DDX49 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.333e-16 Identity = 58/152 (38.16%), Postives = 78/152 (51.32%), Query Frame = 3 Query: 252 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLR-RQSLRPDYIKMFVLDEAD 704 F +GL L+ G ++P+ +Q I +G D + A++G+GKTA F ILQ+L LVL PTRELA QI + R LG LG+K VGG + L HVV+ TPGR+ D LR + I+ V+DEAD Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEAD 155
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DDX46_RAT (Probable ATP-dependent RNA helicase DDX46 OS=Rattus norvegicus GN=Ddx46 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.333e-16 Identity = 54/155 (34.84%), Postives = 83/155 (53.55%), Query Frame = 3 Query: 264 GLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL--DYGLVQCQ---ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIK---MFVLDEAD 704 G+ +L + +G+EKP+ IQ + I G D+I A++G+GKT F + + + L + + A+++ PTRELA QI K + LG++V GGT + E L+ G ++V TPGR+ DML S R ++ VLDEAD Sbjct: 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 532
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DDX46_PONAB (Probable ATP-dependent RNA helicase DDX46 OS=Pongo abelii GN=DDX46 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.333e-16 Identity = 54/155 (34.84%), Postives = 83/155 (53.55%), Query Frame = 3 Query: 264 GLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL--DYGLVQCQ---ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIK---MFVLDEAD 704 G+ +L + +G+EKP+ IQ + I G D+I A++G+GKT F + + + L + + A+++ PTRELA QI K + LG++V GGT + E L+ G ++V TPGR+ DML S R ++ VLDEAD Sbjct: 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 532
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DDX46_MOUSE (Probable ATP-dependent RNA helicase DDX46 OS=Mus musculus GN=Ddx46 PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.333e-16 Identity = 54/155 (34.84%), Postives = 83/155 (53.55%), Query Frame = 3 Query: 264 GLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL--DYGLVQCQ---ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIK---MFVLDEAD 704 G+ +L + +G+EKP+ IQ + I G D+I A++G+GKT F + + + L + + A+++ PTRELA QI K + LG++V GGT + E L+ G ++V TPGR+ DML S R ++ VLDEAD Sbjct: 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 532
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DDX46_HUMAN (Probable ATP-dependent RNA helicase DDX46 OS=Homo sapiens GN=DDX46 PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.333e-16 Identity = 54/155 (34.84%), Postives = 83/155 (53.55%), Query Frame = 3 Query: 264 GLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL--DYGLVQCQ---ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIK---MFVLDEAD 704 G+ +L + +G+EKP+ IQ + I G D+I A++G+GKT F + + + L + + A+++ PTRELA QI K + LG++V GGT + E L+ G ++V TPGR+ DML S R ++ VLDEAD Sbjct: 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 532
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DBP8_COCIM (ATP-dependent RNA helicase DBP8 OS=Coccidioides immitis GN=DBP8 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.333e-16 Identity = 55/156 (35.26%), Postives = 81/156 (51.92%), Query Frame = 3 Query: 249 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDY----IKMFVLDEAD 704 SF ++GL L+ + A +P+AIQ+ I KG D I +++G+GKT F + IL + A+VL PTRELA QI + +A+ +K GG+ +R L HVV+ TPGR+ D ++ Y ++M VLDEAD Sbjct: 107 SFSSLGLAPWLVGSLSAMAIRRPTAIQRACIPEILKGRDCIGGSRTGSGKTVAFAAPILHRWSEDPFGIFAVVLTPTRELALQIFEQFKAISAPQSLKPVLITGGSEMRPQAIALSTRPHVVIATPGRLADHIKTSGQDTIYGLNRVRMVVLDEAD 262
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DBP4_NEOFI (ATP-dependent RNA helicase dbp4 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp4 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.333e-16 Identity = 59/162 (36.42%), Postives = 91/162 (56.17%), Query Frame = 3 Query: 237 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQ-----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDY-IKMFVLDEAD 704 E + SF + L E G+ + ++ + IQ R I KG DV+ A++G+GKT F +L+ L Y + AL+L+PTRELA QI +V+R +G Y +GG S++E+Q L ++++V TPGR+ L + +L Y ++M VLDEAD Sbjct: 44 ETFKSFSDLPLSEPTASGLASSHYKTLTDIQSRAISHALKGRDVLGAAKTGSGKTLAFLVPVLENL-YRKQWAEHDGLGALILSPTRELAIQIFEVLRKIGRYHTFSAGLVIGGKSLKEEQERL-GRMNILVCTPGRMLQHLDQTALFDTYNLQMLVLDEAD 203
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DBP2_CHAGB (ATP-dependent RNA helicase DBP2 OS=Chaetomium globosum GN=DBP2 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.333e-16 Identity = 54/158 (34.18%), Postives = 78/158 (49.37%), Query Frame = 3 Query: 246 DSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQA-----LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEAD 704 ++FD G ++ + A GF P+AIQ +G G DV+ A++G+GKT T+C + ++ + LVLAPTRELA QI++ + G ++ GG R L GV V + TPGR+ DML + VLDEAD Sbjct: 136 ETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQQEITKFGKSSRIRNTCVYGGVPKGPQTRDLSRGVEVCIATPGRLIDMLESGRTNLRRVTYLVLDEAD 293 The following BLAST results are available for this feature:
BLAST of CN189435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189435 ID=CN189435; Name=CN189435; organism=Citrus sinensis; type=EST; length=709bpback to top |