CN189435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A_DEBHA (ATP-dependent RNA helicase eIF4A OS=Debaryomyces hansenii GN=TIF1 PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 4.359e-47 Identity = 91/161 (56.52%), Postives = 120/161 (74.53%), Query Frame = 3 Query: 225 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 T+YD V +FD + L+ N++RGI+ YG+E PSAIQQR I+P +G DV+ QAQSGTGKTATF LQ++D QAL+LAPTRELA QI+ V+ +G YL V VHA +GGTS+++D ++GV +VVGTPGRVFDM+ R+ + D +KMF+LDEADE Sbjct: 16 TNYDNVVYTFDDLNLKPNIVRGIFGYGYESPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRIDENEKSTQALILAPTRELALQIQNVITHIGLYLNVTVHASIGGTSMKDDIEAFKSGVQIVVGTPGRVFDMIERRFFKTDKVKMFILDEADE 176
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A_CANGA (ATP-dependent RNA helicase eIF4A OS=Candida glabrata GN=TIF1 PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 5.694e-47 Identity = 96/173 (55.49%), Postives = 123/173 (71.10%), Query Frame = 3 Query: 189 NELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 +++ D T+YD+V FD M L E LLRG++ YGF KPSAIQQR I+P +G DV+ QAQSGTGKT TF LQ++D + QAL+LAPTRELA QI+KV+ ALG ++ +KVHAC+GGTS ED L+ +VVGTPGRVFD ++R+ + D IKMF+LDEADE Sbjct: 4 DQMTQLDESQIETNYDKVVYEFDDMNLNEKLLRGVFGYGFNKPSAIQQRAIMPIIEGNDVLAQAQSGTGKTGTFSIAALQRIDPAIKAPQALMLAPTRELALQIQKVVMALGFHMDIKVHACIGGTSFVEDAEGLR-DAQIVVGTPGRVFDNIQRRKFKVDNIKMFILDEADE 175
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A_YEAST (ATP-dependent RNA helicase eIF4A OS=Saccharomyces cerevisiae GN=TIF1 PE=1 SV=3) HSP 1 Score: 186.808 bits (473), Expect = 9.712e-47 Identity = 96/161 (59.63%), Postives = 120/161 (74.53%), Query Frame = 3 Query: 225 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 T+YD+V FD M L ENLLRG++ YGFE+PSAIQQR I+P +G DV+ QAQSGTGKT TF LQ++D + QAL+LAPTRELA QI+KV+ AL ++ +KVHAC+GGTS ED L+ +VVGTPGRVFD ++R+ R D IKMF+LDEADE Sbjct: 15 TNYDKVVYKFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDTSVKAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDAEGLR-DAQIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADE 174
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A_YEAS7 (ATP-dependent RNA helicase eIF4A OS=Saccharomyces cerevisiae (strain YJM789) GN=TIF1 PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 9.712e-47 Identity = 96/161 (59.63%), Postives = 120/161 (74.53%), Query Frame = 3 Query: 225 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 T+YD+V FD M L ENLLRG++ YGFE+PSAIQQR I+P +G DV+ QAQSGTGKT TF LQ++D + QAL+LAPTRELA QI+KV+ AL ++ +KVHAC+GGTS ED L+ +VVGTPGRVFD ++R+ R D IKMF+LDEADE Sbjct: 15 TNYDKVVYKFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDTSVKAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDAEGLR-DAQIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADE 174
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A_LODEL (ATP-dependent RNA helicase eIF4A OS=Lodderomyces elongisporus GN=TIF1 PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.268e-46 Identity = 91/161 (56.52%), Postives = 119/161 (73.91%), Query Frame = 3 Query: 225 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 ++YD V FD + L+ N++RGI+ YG+E PSAIQQR I+P +G DV+ QAQSGTGKTATF LQ++D QAL+LAPTRELA QI+ V+ ++G YL V VHA +GGTS+ +D ++GV +VVGTPGRVFDM+ R+ R D +KMF+LDEADE Sbjct: 16 SNYDNVVYKFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRIDENEKSTQALILAPTRELALQIKNVITSIGLYLNVTVHASIGGTSMSDDIEAFKSGVQIVVGTPGRVFDMIERRYFRTDKVKMFILDEADE 176
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A_PICST (ATP-dependent RNA helicase eIF4A OS=Pichia stipitis GN=TIF1 PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.164e-46 Identity = 90/161 (55.90%), Postives = 120/161 (74.53%), Query Frame = 3 Query: 225 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 T+YD V FD + L+ N++RGI+ YG+E PSAIQQR I+P +G DV+ QAQSGTGKTATF LQ++D QAL+LAPTRELA QI+ V+ ++G YL V VHA +GGTS+++D ++GV VVVGTPGRVFDM+ R+ + + +KMF++DEADE Sbjct: 16 TNYDNVVYKFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRIDENEKSTQALILAPTRELALQIKNVITSIGLYLNVTVHASIGGTSMQDDIEAFRSGVQVVVGTPGRVFDMIERRYFKTEKVKMFIMDEADE 176
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: IF4A_CANAL (ATP-dependent RNA helicase eIF4A OS=Candida albicans GN=TIF1 PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.832e-45 Identity = 90/161 (55.90%), Postives = 118/161 (73.29%), Query Frame = 3 Query: 225 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 T+YD V FD + L+ N++RGI+ YG+E PSAIQQR I+P +G DV+ QAQSGTGKTATF LQ+++ QAL+LAPTRELA QI+ V+ A+G YL V VHA +GGTS+ +D ++GV +VVGTPGRV DM+ R+ + D +KMF+LDEADE Sbjct: 16 TNYDNVVYKFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRINENEKATQALILAPTRELALQIKNVITAIGLYLKVTVHASIGGTSMSDDIEAFRSGVQIVVGTPGRVLDMIERRYFKTDKVKMFILDEADE 176
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: FAL1_DEBHA (ATP-dependent RNA helicase FAL1 OS=Debaryomyces hansenii GN=FAL1 PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.832e-45 Identity = 90/157 (57.32%), Postives = 116/157 (73.89%), Query Frame = 3 Query: 237 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 +V+ +F++M L+ +LL+GIY YGFE PSAIQ R I+ G D I QAQSGTGKTATF G+L+ +D CQAL+L+PTRELAQQI+ V++ LGDY+ V HAC+GGT V ED + LQ G +V GTPGRV DM++R++L IKM +LDEADE Sbjct: 23 KVHATFESMNLKTDLLKGIYGYGFEAPSAIQSRAIMQIISGKDTIAQAQSGTGKTATFSIGMLEVIDTKSKDCQALILSPTRELAQQIQSVVKHLGDYMNVHTHACIGGTHVGEDIKKLQQGQQIVSGTPGRVVDMIKRRNLATRNIKMMILDEADE 179
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: FAL1_YARLI (ATP-dependent RNA helicase FAL1 OS=Yarrowia lipolytica GN=FAL1 PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 9.090e-45 Identity = 94/168 (55.95%), Postives = 121/168 (72.02%), Query Frame = 3 Query: 207 DGQDFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 D +F TS D +V +F++M L+++LLRGIYAYGFE PSAIQ R I KG D I QAQSGTGKTATF +L+ +D + QA+VL+PTRELA QI+ V+ ALGDY+ V+ HAC+GGTS+ D + L+AG VV GTPGR DM+++ LR +KM +LDEADE Sbjct: 10 DELEFKTSKDVDVTPTFESMDLKDDLLRGIYAYGFEAPSAIQSRAITQIIKGRDTIAQAQSGTGKTATFSISMLEVIDTKHRETQAMVLSPTRELATQIQSVILALGDYMNVQCHACIGGTSLSVDMKKLEAGQQVVSGTPGRCLDMIKKGCLRTKNLKMLILDEADE 177
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: FAL1_PICST (ATP-dependent RNA helicase FAL1 OS=Pichia stipitis GN=FAL1 PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 9.090e-45 Identity = 88/157 (56.05%), Postives = 114/157 (72.61%), Query Frame = 3 Query: 237 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 +V+ +F++M L+ +LL+GIY YGFE PSAIQ R I+ G D I QAQSGTGKTATF G+LQ +D CQAL+L+PTRELA QI+ V++ LGDY+ + HAC+GGT V +D + L+ G +V GTPGRV DM++RQ L IKM +LDEADE Sbjct: 23 KVHATFESMNLKPDLLKGIYGYGFEAPSAIQSRAIMQIINGRDTIAQAQSGTGKTATFSIGMLQAIDTNAKDCQALILSPTRELAVQIQNVVKHLGDYMNIHTHACIGGTHVGDDIKKLKQGQQIVSGTPGRVVDMVKRQQLSTRNIKMLILDEADE 179 The following BLAST results are available for this feature:
BLAST of CN189435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189435 ID=CN189435; Name=CN189435; organism=Citrus sinensis; type=EST; length=709bpback to top |