CN189434
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: DDX25_HUMAN (ATP-dependent RNA helicase DDX25 OS=Homo sapiens GN=DDX25 PE=1 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 2.502e-34 Identity = 75/171 (43.86%), Postives = 108/171 (63.16%), Query Frame = -1 Query: 215 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP------ENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVAD 709 ELTL I+Q+YV E + K + LC++Y ++ I Q++IF TRR WLT +M H VS G++ R I++ FR G +VLITT++ ARGIDV+QV++V+N+DLP + E YLHRIGR+GRFG+KG+A N + D+ L IQ +N I++L + D Sbjct: 306 ELTLNNIRQYYVLCEHRKDKYQALCNIYGSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDELPSLMKIQDHFNSSIKQLNAEDMD 476
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: DBP5_PICST (ATP-dependent RNA helicase DBP5 OS=Pichia stipitis GN=DBP5 PE=3 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 2.502e-34 Identity = 75/170 (44.12%), Postives = 112/170 (65.88%), Query Frame = -1 Query: 224 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT------QPENYLHRIGRSGRFGRKGVAINFV-TRDDERMLFDIQKFY-NVVIEELPSN 709 EL ++GIKQ Y++ + E+ K E LC+LY L I S+IFV + + L KM++ H S HG ++ + RD ++ +FR G S+VLITT++LARGID+ VS+V+NYDLPT P YLHRIGR+GRFGR GV+I+F+ + +L I+ ++ NV + +P++ Sbjct: 316 ELNVDGIKQLYMDCDSEKHKFEVLCELYGLLTIGSSIIFVERKDTANLLYAKMKAEGHACSILHGGLETSERDRLIDDFREGRSKVLITTNVLARGIDIASVSMVVNYDLPTDKDGNADPSTYLHRIGRTGRFGRVGVSISFIYDKRSYEILMKIKDYFGNVEMTRVPTD 485
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: DDX25_MOUSE (ATP-dependent RNA helicase DDX25 OS=Mus musculus GN=Ddx25 PE=1 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 3.267e-34 Identity = 74/165 (44.85%), Postives = 104/165 (63.03%), Query Frame = -1 Query: 233 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP------ENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEEL 709 ELTL I+Q+YV E + K + LC++Y + I Q++IF TRR WLT +M H VS G++ R I++ FR G +VLITT++ ARGIDV+QV++V+N+DLP E YLHRIGR+GRFG+KG+A N + D +L IQ +N I++L Sbjct: 307 ELTLNNIRQYYVLCENRKGKYQALCNIYGGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVNQSEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKIQDHFNSNIKQL 471
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: DDX25_RAT (ATP-dependent RNA helicase DDX25 OS=Rattus norvegicus GN=Ddx25 PE=1 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 4.267e-34 Identity = 74/165 (44.85%), Postives = 104/165 (63.03%), Query Frame = -1 Query: 233 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP------ENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEEL 709 ELTL I+Q+YV E + K + LC++Y + I Q++IF TRR WLT +M H VS G++ R I++ FR G +VLITT++ ARGIDV+QV++V+N+DLP E YLHRIGR+GRFG+KG+A N + D +L IQ +N I++L Sbjct: 306 ELTLNNIRQYYVLCENRKDKYQALCNIYGGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVNQSEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKIQDHFNSSIKQL 470
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: DBP5_YEAST (ATP-dependent RNA helicase DBP5 OS=Saccharomyces cerevisiae GN=DBP5 PE=1 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 5.573e-34 Identity = 74/159 (46.54%), Postives = 107/159 (67.30%), Query Frame = -1 Query: 254 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT------QPENYLHRIGRSGRFGRKGVAINFV-TRDDERMLFDIQKFY 709 E+ ++ IKQ Y++ + E K + L +LY + I S+IFV T++ + L K++S H VS HGD+ RD ++ +FR G S+VLITT++LARGID+ VS+V+NYDLPT P Y+HRIGR+GRFGRKGVAI+FV ++ +L IQK++ Sbjct: 298 EVNVDAIKQLYMDCKNEADKFDVLTELYGLMTIGSSIIFVATKKTANVLYGKLKSEGHEVSILHGDLQTQERDRLIDDFREGRSKVLITTNVLARGIDIPTVSMVVNYDLPTLANGQADPATYIHRIGRTGRFGRKGVAISFVHDKNSFNILSAIQKYF 456
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: DBP5_YEAS7 (ATP-dependent RNA helicase DBP5 OS=Saccharomyces cerevisiae (strain YJM789) GN=DBP5 PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.573e-34 Identity = 74/159 (46.54%), Postives = 107/159 (67.30%), Query Frame = -1 Query: 254 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT------QPENYLHRIGRSGRFGRKGVAINFV-TRDDERMLFDIQKFY 709 E+ ++ IKQ Y++ + E K + L +LY + I S+IFV T++ + L K++S H VS HGD+ RD ++ +FR G S+VLITT++LARGID+ VS+V+NYDLPT P Y+HRIGR+GRFGRKGVAI+FV ++ +L IQK++ Sbjct: 298 EVNVDAIKQLYMDCKNEADKFDVLTELYGLMTIGSSIIFVATKKTANVLYGKLKSEGHEVSILHGDLQTQERDRLIDDFREGRSKVLITTNVLARGIDIPTVSMVVNYDLPTLANGQADPATYIHRIGRTGRFGRKGVAISFVHDKNSFNILSAIQKYF 456
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: DBP5_LODEL (ATP-dependent RNA helicase DBP5 OS=Lodderomyces elongisporus GN=DBP5 PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.573e-34 Identity = 74/161 (45.96%), Postives = 106/161 (65.84%), Query Frame = -1 Query: 248 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP------TQPENYLHRIGRSGRFGRKGVAINFVTRD-DERMLFDIQKFYNV 709 EL ++GIKQ Y++ + +E K E LC+LY L I S+IFV + D L +M+ HTVS HG ++ RD ++ +FR G S+VLITT++LARGID+ VS+V+NYDLP P YLHRIGR+GRFGR GV+++FV + D + L I +++ + Sbjct: 322 ELNVKGIKQLYMDCKNQEHKFEVLCELYGLLTIGSSIIFVEQKATADSLYLRMKEEGHTVSILHGGLEVADRDRLIDDFREGRSKVLITTNVLARGIDIATVSMVVNYDLPRTKEGRPDPSTYLHRIGRTGRFGRVGVSVSFVANEKDYQTLKYIAEYFGI 482
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: DBP5_PICGU (ATP-dependent RNA helicase DBP5 OS=Pichia guilliermondii GN=DBP5 PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.278e-34 Identity = 74/172 (43.02%), Postives = 112/172 (65.12%), Query Frame = -1 Query: 224 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT------QPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQK----FYNVVIEELPSN 709 EL ++ IKQ Y++ + E+ K E L +LY L I S+IFV T+ ++L KM+S H S H D+D + RD ++ +FR G S+VLITT++LARGID+ VS+V+NYD+P P YLHRIGR+GRFGR GVA++FV D++ D+++ F ++ + +P++ Sbjct: 298 ELNVDAIKQLYMDCDSEKHKAEVLSELYGLLTIGSSIIFVKTKATANYLYAKMKSEGHACSILHSDLDNSERDKLIDDFREGRSKVLITTNVLARGIDIASVSMVVNYDIPVDKDDKPDPSTYLHRIGRTGRFGRVGVAVSFV--HDKKSYEDLEQIRSYFNDIEMTRVPTD 467
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: DBP5_PHANO (ATP-dependent RNA helicase DBP5 OS=Phaeosphaeria nodorum GN=DBP5 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.506e-34 Identity = 74/170 (43.53%), Postives = 110/170 (64.71%), Query Frame = -1 Query: 224 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT-------QPENYLHRIGRSGRFGRKGVAINFV-TRDDERMLFDIQKFYNVVIEELPSN 709 ELT+EGIKQ Y++++K++ K TL Y + S+IFV TRR + L +M + H V+ G ++ RD ++ +FRSG ++VLITT++LARGIDV+ V++VINYD+PT PE YLHRIGR+GRFGR GVA+ FV + + L DI ++ + + ++ Sbjct: 271 ELTIEGIKQLYIDIDKDQDKYSTLLKFYGLMTQASSIIFVRTRRTAEELERRMVAEGHKVAQLSGALEGQDRDRVIDQFRSGEAKVLITTNVLARGIDVESVTMVINYDVPTMADGREADPETYLHRIGRTGRFGRVGVALTFVHDKASWQQLHDIASYFKTDLHPIDTS 440
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: DBP5_KLULA (ATP-dependent RNA helicase DBP5 OS=Kluyveromyces lactis GN=DBP5 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.621e-33 Identity = 75/173 (43.35%), Postives = 112/173 (64.74%), Query Frame = -1 Query: 215 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT------QPENYLHRIGRSGRFGRKGVAINFV-TRDDERMLFDIQKFY-NVVIEELPSNVAD 709 E+ + IKQ +++ + EE K L +LY L I S+IFV T++ + L K++ H VS HGD+ RD ++ +FR G S+VLITT++LARGID+ VS+V+NYDLPT P Y+HRIGR+GRFGR GVAI+F+ + +L IQK++ ++ I ++P++ D Sbjct: 285 EVNVSAIKQLFMDCDNEEHKYTILSELYGLLTIGSSIIFVKTKQTANLLYAKLKKEGHQVSILHGDLQSQDRDRLIDDFREGRSKVLITTNVLARGIDIPSVSMVVNYDLPTLPNGQADPSTYVHRIGRTGRFGRTGVAISFIHDKKSFEVLSAIQKYFGDIEITKVPTDDLD 457 The following BLAST results are available for this feature:
BLAST of CN189434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189434 ID=CN189434; Name=CN189434; organism=Citrus sinensis; type=EST; length=709bpback to top |