CN189434
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: DDX25_BOVIN (ATP-dependent RNA helicase DDX25 OS=Bos taurus GN=DDX25 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.118e-33 Identity = 73/165 (44.24%), Postives = 104/165 (63.03%), Query Frame = -1 Query: 233 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP------ENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEEL 709 ELTL I+Q+YV + K + LC++Y + I Q++IF TRR WLT +M H VS G++ + R I++ FR G +VLITT++ ARGIDV+QV++V+N+DLP E YLHRIGR+GRFG+KG+A N + D +L IQ +N I++L Sbjct: 306 ELTLNNIRQYYVLCGNRKDKYQALCNIYGGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKIQDHFNSSIKQL 470
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: DBP5_NEOFI (ATP-dependent RNA helicase dbp5 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp5 PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.766e-33 Identity = 79/171 (46.20%), Postives = 110/171 (64.33%), Query Frame = -1 Query: 233 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT--QP---------ENYLHRIGRSGRFGRKGVAINFVT-RDDERMLFDIQKFYNVVIEEL 709 ELT+EGIKQ Y++ E K +TL LY L + S+IFV TR + +M + HTV + G+ D + RD I+ +FR G ++VLI T++LARGIDV VS+VINYD+P QP + YLHRIGR+GRFGR GV+I+FV+ R++ ML IQ ++N I+ + Sbjct: 289 ELTVEGIKQLYLDCADGEDKYKTLVQLYGLLTVGSSIIFVQTRAAAQEIEKRMTAEGHTVVSLTGERDPSVRDAIIDQFRRGEAKVLIATNVLARGIDVSTVSMVINYDIPELHQPSVPGRQADFQTYLHRIGRTGRFGRVGVSISFVSNREEWEMLNQIQTYFNCEIQRV 459
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: DBP5_AJECN (ATP-dependent RNA helicase DBP5 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=DBP5 PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.766e-33 Identity = 77/171 (45.03%), Postives = 109/171 (63.74%), Query Frame = -1 Query: 233 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP-----------TQPENYLHRIGRSGRFGRKGVAINFVTRDDE-RMLFDIQKFYNVVIEEL 709 ELT+EGIKQ Y++ + +E K + L Y L I S+IFV TR + +M + HTV + G ++ RD I+ +FR G ++VLITT++LARGIDVQ VS+VINYD+P + YLHRIGR+GRFGR GVA++FV +E +ML DI+ ++N I+ + Sbjct: 299 ELTVEGIKQLYLDCDSDEHKFDILVKFYGLLTIGSSIIFVKTRASAVEIERRMVAEGHTVVSLTGGVEGQKRDEIIDKFRQGDAKVLITTNVLARGIDVQTVSMVINYDIPELHAPKATKRIADAQTYLHRIGRTGRFGRVGVAVSFVASKEEWQMLQDIKTYFNTEIQRV 469
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: DDX19_DROME (DEAD-box helicase Dbp80 OS=Drosophila melanogaster GN=Dbp80 PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.612e-33 Identity = 73/172 (42.44%), Postives = 112/172 (65.12%), Query Frame = -1 Query: 215 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP------TQPENYLHRIGRSGRFGRKGVAINFVTRDDE-RMLFDIQKFYNVVIEELPSNVAD 709 E +LE IKQ+YV + EE K + ++Y +++ Q++IF +T+R WL KM S H+V+ GD+ R ++ FRSG +VLITT++L+RGID++Q+ +V+N+DLP E YLHRIGR+GRFG+ G+AIN +T + ++ DI+K +N IE L ++ AD Sbjct: 282 EESLENIKQYYVKCKNEEGKYNAIQNIYGCISVGQAIIFCHTKRTAAWLAAKMTSDGHSVAVLTGDLTVVQRLDVLDRFRSGLEKVLITTNILSRGIDIEQLQVVVNFDLPVDLDGMADCETYLHRIGRTGRFGKSGIAINLITDEKTMKVCSDIEKHFNKKIEVLNTDSAD 453
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: DBP5_ASPFU (ATP-dependent RNA helicase dbp5 OS=Aspergillus fumigatus GN=dbp5 PE=3 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 4.718e-33 Identity = 79/171 (46.20%), Postives = 109/171 (63.74%), Query Frame = -1 Query: 233 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT--QP---------ENYLHRIGRSGRFGRKGVAINFVT-RDDERMLFDIQKFYNVVIEEL 709 ELT+EGIKQ Y++ E K TL LY L + S+IFV TR + +M + HTV + G+ D + RD I+ +FR G ++VLI T++LARGIDV VS+VINYD+P QP + YLHRIGR+GRFGR GV+I+FV+ R++ ML IQ ++N I+ + Sbjct: 289 ELTVEGIKQLYLDCADGEDKYRTLVQLYGLLTVGSSIIFVQTRAAAQEIERRMTAEGHTVVSLTGERDPSVRDAIIDQFRRGEAKVLIATNVLARGIDVSTVSMVINYDIPELHQPNVPGRQADFQTYLHRIGRTGRFGRVGVSISFVSNREEWEMLNQIQTYFNCEIQRV 459
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: DDX25_XENLA (ATP-dependent RNA helicase DDX25 OS=Xenopus laevis GN=deadsouth PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.161e-33 Identity = 70/167 (41.92%), Postives = 105/167 (62.87%), Query Frame = -1 Query: 227 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP------ENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPS 709 ELTL+ I+QFY E +E K LC+LY + I Q+++F TR+ WL+ K+ H V+ G++ R +++ FR G +VL+TT++ ARGIDV+QVS+V+N+DLP E YLHRIGR+GRFG+KG+A++ + ML +I+ +N I +L S Sbjct: 306 ELTLKNIQQFYDQCENKEQKYSALCNLYGVITIAQAIVFCQTRKIASWLSQKLSDDGHQVALLSGELPVYDRADMIQRFREGREKVLVTTNVCARGIDVEQVSIVVNFDLPVNVDGSVDFETYLHRIGRTGRFGKKGIAVSLIENFFVYMLKEIEDHFNTKITKLNS 472
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: DBP5_SCHPO (ATP-dependent RNA helicase dbp5 OS=Schizosaccharomyces pombe GN=dbp5 PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.161e-33 Identity = 74/169 (43.79%), Postives = 110/169 (65.09%), Query Frame = -1 Query: 224 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP------TQPENYLHRIGRSGRFGRKGVAINFV-TRDDERMLFDIQKFYNVVIEELPSN 709 EL++EGIKQ Y++ + EE K L +LY L I QS+IF + + + +M + HTV+ G+++ RD IM FR G+S+VL+TT+++ARGIDV QV+LV+NYD+P P+ YLHRIGR+GRFGR GV+INFV + + IQ+++ I +P++ Sbjct: 320 ELSVEGIKQLYMDCQSEEHKYNVLVELYGLLTIGQSIIFCKKKDTAEEIARRMTADGHTVACLTGNLEGAQRDAIMDSFRVGTSKVLVTTNVIARGIDVSQVNLVVNYDMPLDQAGRPDPQTYLHRIGRTGRFGRVGVSINFVHDKKSWEEMNAIQEYFQRPITRVPTD 488
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: DBP5_MAGGR (ATP-dependent RNA helicase DBP5 OS=Magnaporthe grisea GN=DBP5 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.161e-33 Identity = 79/168 (47.02%), Postives = 104/168 (61.90%), Query Frame = -1 Query: 233 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ--------PENYLHRIGRSGRFGRKGVAINFV-TRDDERMLFDIQKFYNVVIEEL 709 ELT++GI Q Y++ + K E LC LY + I SVIFV TR D + +M + H VSA HG RD ++ +FRSG S+VLITT++LARGIDV VS+VINYD+P + E YLHRIGR+GRFGR GV+I+FV R L I + Y + + +L Sbjct: 304 ELTVKGISQMYMDCPSLKEKYEVLCKLYGLMTIGSSVIFVKTRESADEIQRRMEADGHKVSALHGAFQGQERDQLLDDFRSGKSKVLITTNVLARGIDVSSVSMVINYDIPMKGPGDQSPDAETYLHRIGRTGRFGRVGVSISFVHDRKSFTALSSIAEHYGIDLIQL 471
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: DD19A_MOUSE (ATP-dependent RNA helicase DDX19A OS=Mus musculus GN=Ddx19a PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.047e-33 Identity = 73/172 (42.44%), Postives = 107/172 (62.21%), Query Frame = -1 Query: 215 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP------ENYLHRIGRSGRFGRKGVAINFV-TRDDERMLFDIQKFYNVVIEELPSNVAD 709 E TL+ IKQ+YV E K + LC+LY + I Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+TT++ ARGIDV+QVS+VIN+DLP E YLHRIGR+GRFG++G+A+N V ++ +L IQ+ +N IE L ++ D Sbjct: 300 EETLDTIKQYYVLCNNREEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLD 471
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: DD19B_HUMAN (ATP-dependent RNA helicase DDX19B OS=Homo sapiens GN=DDX19B PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.793e-32 Identity = 72/172 (41.86%), Postives = 107/172 (62.21%), Query Frame = -1 Query: 215 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP------ENYLHRIGRSGRFGRKGVAINFV-TRDDERMLFDIQKFYNVVIEELPSNVAD 709 E TL+ IKQ+YV + K + LC+LY + I Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+TT++ ARGIDV+QVS+VIN+DLP E YLHRIGR+GRFG++G+A+N V ++ +L IQ+ +N IE L ++ D Sbjct: 301 EETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLD 472 The following BLAST results are available for this feature:
BLAST of CN189434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189434 ID=CN189434; Name=CN189434; organism=Citrus sinensis; type=EST; length=709bpback to top |