CN189434

Overview
NameCN189434
Unique NameCN189434
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: IF4A2_HUMAN (Eukaryotic initiation factor 4A-II OS=Homo sapiens GN=EIF4A2 PE=1 SV=2)

HSP 1 Score: 283.878 bits (725), Expect = 5.885e-76
Identity = 136/167 (81.44%), Postives = 152/167 (91.02%), Query Frame = -1 
Query:  209 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 709
            ELTLEGIKQFY+NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HGDMDQ  RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT  ENY+HRIGR GRFGRKGVAINFVT +D+R+L DI+ FYN  +EE+P NVADL+
Sbjct:  241 ELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 407
[Close]
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: IF4A2_CHICK (Eukaryotic initiation factor 4A-II OS=Gallus gallus GN=EIF4A2 PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 5.885e-76
Identity = 136/167 (81.44%), Postives = 152/167 (91.02%), Query Frame = -1 
Query:  209 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 709
            ELTLEGIKQFY+NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HGDMDQ  RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT  ENY+HRIGR GRFGRKGVAINFVT +D+R+L DI+ FYN  +EE+P NVADL+
Sbjct:  241 ELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 407
[Close]
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: IF4A2_BOVIN (Eukaryotic initiation factor 4A-II OS=Bos taurus GN=EIF4A2 PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 5.885e-76
Identity = 136/167 (81.44%), Postives = 152/167 (91.02%), Query Frame = -1 
Query:  209 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 709
            ELTLEGIKQFY+NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HGDMDQ  RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT  ENY+HRIGR GRFGRKGVAINFVT +D+R+L DI+ FYN  +EE+P NVADL+
Sbjct:  241 ELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 407
[Close]
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: IF4A1_RABIT (Eukaryotic initiation factor 4A-I (Fragment) OS=Oryctolagus cuniculus GN=EIF4A1 PE=1 SV=2)

HSP 1 Score: 279.641 bits (714), Expect = 1.110e-74
Identity = 135/167 (80.84%), Postives = 150/167 (89.82%), Query Frame = -1 
Query:  209 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 709
            ELTLEGI+QFY+NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HGDMDQ  RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT  ENY+HRIGR GRFGRKGVAIN VT +D+R L DI+ FYN  IEE+P NVADL+
Sbjct:  232 ELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 398
[Close]
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: IF4A1_PONAB (Eukaryotic initiation factor 4A-I OS=Pongo abelii GN=EIF4A1 PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.110e-74
Identity = 135/167 (80.84%), Postives = 150/167 (89.82%), Query Frame = -1 
Query:  209 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 709
            ELTLEGI+QFY+NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HGDMDQ  RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT  ENY+HRIGR GRFGRKGVAIN VT +D+R L DI+ FYN  IEE+P NVADL+
Sbjct:  240 ELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
[Close]
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: IF4A1_MOUSE (Eukaryotic initiation factor 4A-I OS=Mus musculus GN=Eif4a1 PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.110e-74
Identity = 135/167 (80.84%), Postives = 150/167 (89.82%), Query Frame = -1 
Query:  209 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 709
            ELTLEGI+QFY+NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HGDMDQ  RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT  ENY+HRIGR GRFGRKGVAIN VT +D+R L DI+ FYN  IEE+P NVADL+
Sbjct:  240 ELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
[Close]
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: IF4A1_HUMAN (Eukaryotic initiation factor 4A-I OS=Homo sapiens GN=EIF4A1 PE=1 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.110e-74
Identity = 135/167 (80.84%), Postives = 150/167 (89.82%), Query Frame = -1 
Query:  209 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 709
            ELTLEGI+QFY+NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HGDMDQ  RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT  ENY+HRIGR GRFGRKGVAIN VT +D+R L DI+ FYN  IEE+P NVADL+
Sbjct:  240 ELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
[Close]
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: IF4A1_BOVIN (Eukaryotic initiation factor 4A-I OS=Bos taurus GN=EIF4A1 PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.110e-74
Identity = 135/167 (80.84%), Postives = 150/167 (89.82%), Query Frame = -1 
Query:  209 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 709
            ELTLEGI+QFY+NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HGDMDQ  RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT  ENY+HRIGR GRFGRKGVAIN VT +D+R L DI+ FYN  IEE+P NVADL+
Sbjct:  240 ELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
[Close]
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: IF4A1_PANTR (Eukaryotic initiation factor 4A-I OS=Pan troglodytes GN=EIF4A1 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.229e-74
Identity = 134/167 (80.24%), Postives = 149/167 (89.22%), Query Frame = -1 
Query:  209 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 709
            ELTLEGI+QFY+NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HGDMDQ  RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT  ENY+HRIGR GRFGRKGV IN VT +D+R L DI+ FYN  IEE+P NVADL+
Sbjct:  240 ELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVTINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
[Close]
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: IF4A1_MACFA (Eukaryotic initiation factor 4A-I OS=Macaca fascicularis GN=EIF4A1 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.229e-74
Identity = 134/167 (80.24%), Postives = 149/167 (89.22%), Query Frame = -1 
Query:  209 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 709
            ELTLEGI+QFY+NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD T SA HGDMDQ  RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT  ENY+HRIGR GRFGRKGVAIN VT +D+R L DI+ FYN  IEE+P NVADL+
Sbjct:  240 ELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTASAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
The following BLAST results are available for this feature:
BLAST of CN189434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
IF4A2_HUMAN5.885e-7681.44Eukaryotic initiation factor 4A-II OS=Homo sapiens... [more]
IF4A2_CHICK5.885e-7681.44Eukaryotic initiation factor 4A-II OS=Gallus gallu... [more]
IF4A2_BOVIN5.885e-7681.44Eukaryotic initiation factor 4A-II OS=Bos taurus G... [more]
IF4A1_RABIT1.110e-7480.84Eukaryotic initiation factor 4A-I (Fragment) OS=Or... [more]
IF4A1_PONAB1.110e-7480.84Eukaryotic initiation factor 4A-I OS=Pongo abelii ... [more]
IF4A1_MOUSE1.110e-7480.84Eukaryotic initiation factor 4A-I OS=Mus musculus ... [more]
IF4A1_HUMAN1.110e-7480.84Eukaryotic initiation factor 4A-I OS=Homo sapiens ... [more]
IF4A1_BOVIN1.110e-7480.84Eukaryotic initiation factor 4A-I OS=Bos taurus GN... [more]
IF4A1_PANTR3.229e-7480.24Eukaryotic initiation factor 4A-I OS=Pan troglodyt... [more]
IF4A1_MACFA3.229e-7480.24Eukaryotic initiation factor 4A-I OS=Macaca fascic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001N15_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001N15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189434 ID=CN189434; Name=CN189434; organism=Citrus sinensis; type=EST; length=709bp
CCCTTTTTTTTTCAATGTGCATGACCCATATGATTAAATGGTCGGATATG
TTTGAGAACAACATTAATTTAAGACACTAGACGGAAAGGAAGAAGAAACC
AAAAAAAAAAAAAAAAGGGGAGAAAATATCCACCACATTAAATAGTACTT
GCAAAATCAGGAAACCCCTTCTTGCCTCGACAAACTTACAAAAAACAGAA
CCTCCTCAAAGAAGGTCAGCAACATTTGAAGGCAGCTCCTCAATGACCAC
GTTATAGAACTTTTGAATATCAAAAAGCATTCTCTCATCATCCCTTGTCA
CAAAATTAATGGCAACACCCTTTCTTCCAAATCGACCACTTCGTCCAATA
CGGTGAAGGTAGTTTTCTGGTTGAGTCGGCAGATCATAATTTATGACAAG
TGAAACTTGCTGCACATCAATACCACGAGCCAACAGATCAGTGGTGATGA
GAACACGAGAAGAACCAGAGCGAAATTCACGCATAATGATATCTCGGGTG
TTCTGATCCATGTCCCCATGAGTGGCAGAGACTGTATGGTCACGGCTTCG
CATCTTGTCAGTAAGCCAGTCGACCTTTCGCCGAGTGTTCACAAAGATGA
CACTCTGGGTTATGGCCAGAGTCTCATAAAGATCACAGAGTGTTTCAAGC
TTCCATTCTTCCTTCTCAACATTGACATAAAACTGCTTGATACCCTCAAG
GGTGAGTTC
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