CN189434

Overview
NameCN189434
Unique NameCN189434
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: IF4A_USTMA (ATP-dependent RNA helicase eIF4A OS=Ustilago maydis GN=TIF1 PE=3 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 2.314e-72
Identity = 133/167 (79.64%), Postives = 150/167 (89.82%), Query Frame = -1 
Query:  209 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 709
            ELTLEGIKQFYV VEKE+WKL+TLCDLYET+ ITQ+VIF NTRRKVDWLTDK+ SR+ TVSA HGDM+Q  R++IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP+  ENY+HRIGR GRFGRKGVAINFVT DD RML DI++FY+  I+E+P NVADL+
Sbjct:  245 ELTLEGIKQFYVAVEKEDWKLDTLCDLYETVTITQAVIFCNTRRKVDWLTDKLTSREFTVSAMHGDMEQAQREVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFVTSDDVRMLRDIEQFYSTQIDEMPLNVADLI 411
[Close]
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: IF4A_CHAGB (ATP-dependent RNA helicase eIF4A OS=Chaetomium globosum GN=TIF1 PE=3 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 3.342e-71
Identity = 130/167 (77.84%), Postives = 148/167 (88.62%), Query Frame = -1 
Query:  209 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 709
            ELTLEGIKQFY+ VEKE+WKL+TL DLYET+ ITQ+VIF NTRRKVDWLTDK+++RD TVSA HGDMDQ  RD+IM+EFRSGSSRVLI TDLLARGIDVQQVSLVINYDLP   ENY+HRIGR GRFGRKGVAINFVT DD RM+ +I++FY+  IEE+P NVADL+
Sbjct:  231 ELTLEGIKQFYIAVEKEDWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLQARDFTVSAMHGDMDQTQRDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 397
[Close]
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: IF4A_ASPTN (ATP-dependent RNA helicase eIF4A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=tif1 PE=3 SV=2)

HSP 1 Score: 268.085 bits (684), Expect = 3.342e-71
Identity = 131/167 (78.44%), Postives = 148/167 (88.62%), Query Frame = -1 
Query:  209 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 709
            ELTLEGIKQFY+ VEKEEWKL+TL DLYET+ ITQ+VIF NTRRKVDWLTDK+ +RD TVSA HGDM+Q+ RDIIM+EFRSGSSRVLI TDLLARGIDVQQVSLVINYDLP   ENY+HRIGR GRFGRKGVAINFVT DD RM+ +I++FY+  IEE+P NVADL+
Sbjct:  230 ELTLEGIKQFYIAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQSQRDIIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 396
[Close]
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: IF4A_NEUCR (ATP-dependent RNA helicase eIF4A OS=Neurospora crassa GN=tif-1 PE=3 SV=2)

HSP 1 Score: 267.7 bits (683), Expect = 4.365e-71
Identity = 131/167 (78.44%), Postives = 147/167 (88.02%), Query Frame = -1 
Query:  209 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 709
            ELTLEGIKQFY+ VEKEEWKL+TL DLYET+ ITQ+VIF NTRRKVDWLTDK+ +RD TVSA HGDMDQ  RD+IM+EFRSGSSRVLI TDLLARGIDVQQVSLVINYDLP   ENY+HRIGR GRFGRKGVAINFVT DD RM+ +I++FY+  IEE+P NVADL+
Sbjct:  231 ELTLEGIKQFYIAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 397
[Close]
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: IF4A_MAGGR (ATP-dependent RNA helicase eIF4A OS=Magnaporthe grisea GN=TIF1 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 4.365e-71
Identity = 131/167 (78.44%), Postives = 147/167 (88.02%), Query Frame = -1 
Query:  209 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 709
            ELTLEGIKQFY+ VEKEEWKL+TL DLYET+ ITQ+VIF NTRRKVDWLTDK+ +RD TVSA HGDMDQ  RD+IM+EFRSGSSRVLI TDLLARGIDVQQVSLVINYDLP   ENY+HRIGR GRFGRKGVAINFVT DD RM+ +I++FY+  IEE+P NVADL+
Sbjct:  230 ELTLEGIKQFYIAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 396
[Close]
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: IF4A_ASPOR (ATP-dependent RNA helicase eIF4A OS=Aspergillus oryzae GN=tif1 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 4.365e-71
Identity = 130/167 (77.84%), Postives = 148/167 (88.62%), Query Frame = -1 
Query:  209 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 709
            ELTLEGIKQFY+ VEKEEWKL+TL DLYET+ ITQ+VIF NTRRKVDWLTDK+ +RD TVSA HGDM+Q+ RD+IM+EFRSGSSRVLI TDLLARGIDVQQVSLVINYDLP   ENY+HRIGR GRFGRKGVAINFVT DD RM+ +I++FY+  IEE+P NVADL+
Sbjct:  255 ELTLEGIKQFYIAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQSQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 421
[Close]
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: IF4A_ASPCL (ATP-dependent RNA helicase eIF4A OS=Aspergillus clavatus GN=tif1 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 4.365e-71
Identity = 130/167 (77.84%), Postives = 148/167 (88.62%), Query Frame = -1 
Query:  209 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 709
            ELTLEGIKQFY+ VEKEEWKL+TL DLYET+ ITQ+VIF NTRRKVDWLTDK+ +RD TVSA HGDM+Q+ RD+IM+EFRSGSSRVLI TDLLARGIDVQQVSLVINYDLP   ENY+HRIGR GRFGRKGVAINFVT DD RM+ +I++FY+  IEE+P NVADL+
Sbjct:  232 ELTLEGIKQFYIAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQSQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 398
[Close]
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: IF4A_COCIM (ATP-dependent RNA helicase eIF4A OS=Coccidioides immitis GN=TIF1 PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 5.700e-71
Identity = 130/167 (77.84%), Postives = 148/167 (88.62%), Query Frame = -1 
Query:  209 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 709
            ELTLEGIKQFY+ VEKEEWKL+TL DLYET+ ITQ+VIF NTRRKVDWLTDK+ +RD TVSA HG+M+QN RD+IM+EFRSGSSRVLI TDLLARGIDVQQVSLVINYDLP   ENY+HRIGR GRFGRKGVAINFVT DD RM+ +I++FY+  IEE+P NVADL+
Sbjct:  232 ELTLEGIKQFYIAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLIARDFTVSAMHGEMEQNQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 398
[Close]
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: IF4A_BOTFB (ATP-dependent RNA helicase eIF4A OS=Botryotinia fuckeliana (strain B05.10) GN=tif1 PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 5.700e-71
Identity = 130/167 (77.84%), Postives = 147/167 (88.02%), Query Frame = -1 
Query:  209 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 709
            ELTLEGIKQFY+ VEKE+WKL+TL DLYET+ ITQ+VIF NTRRKVDWLTDK+ +RD TVSA HGDMDQ  RD+IM+EFRSGSSRVLI TDLLARGIDVQQVSLVINYDLP   ENY+HRIGR GRFGRKGVAINFVT DD RM+ +I++FY+  IEE+P NVADL+
Sbjct:  232 ELTLEGIKQFYIAVEKEDWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQGQRDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 398
[Close]
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: IF4A_ASPNC (ATP-dependent RNA helicase eIF4A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=tif1 PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 5.700e-71
Identity = 130/167 (77.84%), Postives = 147/167 (88.02%), Query Frame = -1 
Query:  209 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 709
            ELTLEGIKQFY+ VEKEEWKL+TL DLYET+ ITQ+VIF NTRRKVDWLTDK+ +RD TVSA HGDM+Q  RD+IM+EFRSGSSRVLI TDLLARGIDVQQVSLVINYDLP   ENY+HRIGR GRFGRKGVAINFVT DD RM+ +I++FY+  IEE+P NVADL+
Sbjct:  232 ELTLEGIKQFYIAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQGQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 398
The following BLAST results are available for this feature:
BLAST of CN189434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
IF4A_USTMA2.314e-7279.64ATP-dependent RNA helicase eIF4A OS=Ustilago maydi... [more]
IF4A_CHAGB3.342e-7177.84ATP-dependent RNA helicase eIF4A OS=Chaetomium glo... [more]
IF4A_ASPTN3.342e-7178.44ATP-dependent RNA helicase eIF4A OS=Aspergillus te... [more]
IF4A_NEUCR4.365e-7178.44ATP-dependent RNA helicase eIF4A OS=Neurospora cra... [more]
IF4A_MAGGR4.365e-7178.44ATP-dependent RNA helicase eIF4A OS=Magnaporthe gr... [more]
IF4A_ASPOR4.365e-7177.84ATP-dependent RNA helicase eIF4A OS=Aspergillus or... [more]
IF4A_ASPCL4.365e-7177.84ATP-dependent RNA helicase eIF4A OS=Aspergillus cl... [more]
IF4A_COCIM5.700e-7177.84ATP-dependent RNA helicase eIF4A OS=Coccidioides i... [more]
IF4A_BOTFB5.700e-7177.84ATP-dependent RNA helicase eIF4A OS=Botryotinia fu... [more]
IF4A_ASPNC5.700e-7177.84ATP-dependent RNA helicase eIF4A OS=Aspergillus ni... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001N15_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001N15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189434 ID=CN189434; Name=CN189434; organism=Citrus sinensis; type=EST; length=709bp
CCCTTTTTTTTTCAATGTGCATGACCCATATGATTAAATGGTCGGATATG
TTTGAGAACAACATTAATTTAAGACACTAGACGGAAAGGAAGAAGAAACC
AAAAAAAAAAAAAAAAGGGGAGAAAATATCCACCACATTAAATAGTACTT
GCAAAATCAGGAAACCCCTTCTTGCCTCGACAAACTTACAAAAAACAGAA
CCTCCTCAAAGAAGGTCAGCAACATTTGAAGGCAGCTCCTCAATGACCAC
GTTATAGAACTTTTGAATATCAAAAAGCATTCTCTCATCATCCCTTGTCA
CAAAATTAATGGCAACACCCTTTCTTCCAAATCGACCACTTCGTCCAATA
CGGTGAAGGTAGTTTTCTGGTTGAGTCGGCAGATCATAATTTATGACAAG
TGAAACTTGCTGCACATCAATACCACGAGCCAACAGATCAGTGGTGATGA
GAACACGAGAAGAACCAGAGCGAAATTCACGCATAATGATATCTCGGGTG
TTCTGATCCATGTCCCCATGAGTGGCAGAGACTGTATGGTCACGGCTTCG
CATCTTGTCAGTAAGCCAGTCGACCTTTCGCCGAGTGTTCACAAAGATGA
CACTCTGGGTTATGGCCAGAGTCTCATAAAGATCACAGAGTGTTTCAAGC
TTCCATTCTTCCTTCTCAACATTGACATAAAACTGCTTGATACCCTCAAG
GGTGAGTTC
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