CN189434

Overview
NameCN189434
Unique NameCN189434
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: FAL1_PHANO (ATP-dependent RNA helicase FAL1 OS=Phaeosphaeria nodorum GN=FAL1 PE=3 SV=3)

HSP 1 Score: 249.98 bits (637), Expect = 9.418e-66
Identity = 119/167 (71.26%), Postives = 144/167 (86.23%), Query Frame = -1 
Query:  209 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 709
            ELTLEG+KQ+++ +EKEEWK +TLCDLY+TL ITQ+VIF NTRRKVDWLTDKMR  + TVS+ HGDM Q  RD IM++FR  +SRVLI+TD+ ARGIDVQQVSLVINYDLP+  ENY+HRIGRSGRFGRKGVAINFVT++D R+L DI+ +Y+  I+E+P NVADLL
Sbjct:  207 ELTLEGLKQYFIAIEKEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQRERDSIMQDFRQANSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTQEDVRILRDIELYYSTQIDEMPMNVADLL 373
[Close]
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: FAL1_NEUCR (ATP-dependent RNA helicase fal-1 OS=Neurospora crassa GN=fal-1 PE=3 SV=2)

HSP 1 Score: 249.98 bits (637), Expect = 9.418e-66
Identity = 119/167 (71.26%), Postives = 144/167 (86.23%), Query Frame = -1 
Query:  209 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 709
            ELTLEG+KQ+++ VEKE+WK +TLCDLY+TL ITQ+VIF NTRRKVDWLTDKMR  + TVS+ HGDM Q  RD IM++FR G+SRVLI+TD+ ARGIDVQQVSLVINYDLP+  ENY+HRIGRSGRFGRKGVAINFVT +D R+L DI+ +Y+  I+E+P NVADL+
Sbjct:  233 ELTLEGLKQYFIAVEKEDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDVRILRDIELYYSTQIDEMPMNVADLI 399
[Close]
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: FAL1_GIBZE (ATP-dependent RNA helicase FAL1 OS=Gibberella zeae GN=FAL1 PE=3 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 9.418e-66
Identity = 119/167 (71.26%), Postives = 144/167 (86.23%), Query Frame = -1 
Query:  209 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 709
            ELTLEG+KQ+++ VEKE+WK +TLCDLY+TL ITQ+VIF NTRRKVDWLTDKMR  + TVS+ HGDM Q  RD IM++FR G+SRVLI+TD+ ARGIDVQQVSLVINYDLP+  ENY+HRIGRSGRFGRKGVAINFVT +D R+L DI+ +Y+  I+E+P NVADL+
Sbjct:  234 ELTLEGLKQYFIAVEKEDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTTEDVRILRDIELYYSTQIDEMPMNVADLI 400
[Close]
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: FAL1_MAGGR (ATP-dependent RNA helicase FAL1 OS=Magnaporthe grisea GN=FAL1 PE=3 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.230e-65
Identity = 118/167 (70.66%), Postives = 144/167 (86.23%), Query Frame = -1 
Query:  209 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 709
            ELTLEG+KQ+++ +EKE+WK +TLCDLY+TL ITQ+VIF NTRRKVDWLTDKMR  + TVS+ HGDM Q  RD IM++FR G+SRVLI+TD+ ARGIDVQQVSLVINYDLP+  ENY+HRIGRSGRFGRKGVAINFVT +D R+L DI+ +Y+  I+E+P NVADL+
Sbjct:  234 ELTLEGLKQYFIAIEKEDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDVRILRDIELYYSTQIDEMPMNVADLI 400
[Close]
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: FAL1_BOTFB (ATP-dependent RNA helicase fal1 OS=Botryotinia fuckeliana (strain B05.10) GN=fal1 PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.098e-65
Identity = 119/167 (71.26%), Postives = 143/167 (85.63%), Query Frame = -1 
Query:  209 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 709
            ELTLEG+KQ+++ VEKE+WK +TLCDLY+TL ITQ+VIF NTRRKVDWLTDKMR  + TVS+ HG+M Q  RD IM++FR G+SRVLI+TD+ ARGIDVQQVSLVINYDLP   ENY+HRIGRSGRFGRKGVAINFVT +D R+L DI+ +Y+  I+E+P NVADLL
Sbjct:  232 ELTLEGLKQYFIAVEKEDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPVNRENYIHRIGRSGRFGRKGVAINFVTSEDVRILRDIELYYSTQIDEMPMNVADLL 398
[Close]
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: IF4A_CAEEL (Eukaryotic initiation factor 4A OS=Caenorhabditis elegans GN=inf-1 PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 4.674e-65
Identity = 119/167 (71.26%), Postives = 139/167 (83.23%), Query Frame = -1 
Query:  209 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 709
            ELTLEGI+QFY+NV+K+EWK + LCDLY  + +TQ+VIF NTRRKVD LT+KM     TVS  HGDMDQ  RD IMREFRSGSSRVLITTD+LARGIDVQQVSLVINYDLP+  ENY+HRIGRSGRFGRKGVAINFVT +D R L +I+ +Y   IEE+P ++ADL+
Sbjct:  236 ELTLEGIRQFYINVQKDEWKFDCLCDLYNVVNVTQAVIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIESYYTTQIEEMPESIADLI 402
[Close]
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: RH2_ARATH (DEAD-box ATP-dependent RNA helicase 2 OS=Arabidopsis thaliana GN=RH2 PE=2 SV=2)

HSP 1 Score: 246.514 bits (628), Expect = 1.041e-64
Identity = 121/167 (72.46%), Postives = 142/167 (85.03%), Query Frame = -1 
Query:  209 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 709
            ELTLEGIKQF+V VEKEEWK +TLCDLY+TL ITQ+VIF NT+RKVD+L++KMRS + TVS+ HGDM Q  RD IM EFRSG SRVLITTD+ ARGIDVQQVSLVINYDLP   E Y+HRIGRSGRFGRKGVAINFV  DD ++L DI+++Y+  I+E+P NVADL+
Sbjct:  242 ELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 408
[Close]
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: IF4A_CRYPV (Eukaryotic initiation factor 4A OS=Cryptosporidium parvum GN=EIF4-A PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.041e-64
Identity = 119/167 (71.26%), Postives = 140/167 (83.83%), Query Frame = -1 
Query:  209 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 709
            ELTLEGI+QFYV VEK+EWK++TL DLYETL I Q++I+ NTRR+VD LT +MR RD T S+ HGDMDQ  R++IMR+FRSGSSRVLITTDLLARGIDVQQVSLVINYDLP  PE Y+HRIGRSGRFG+KGV+INFVT DD   L DI++ YN  IEE+P  + D+L
Sbjct:  238 ELTLEGIRQFYVGVEKDEWKMDTLIDLYETLTIVQAIIYCNTRRRVDQLTKQMRERDFTCSSMHGDMDQKDREVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPVSPETYIHRIGRSGRFGKKGVSINFVTDDDIVCLRDIERHYNTQIEEMPMGITDIL 404
[Close]
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: IF4A3_NICPL (Eukaryotic initiation factor 4A-3 OS=Nicotiana plumbaginifolia PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.776e-64
Identity = 119/167 (71.26%), Postives = 140/167 (83.83%), Query Frame = -1 
Query:  209 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 709
            ELTLEGIKQF+V VEKEEWK +TLCDLY+TL ITQ+VIF NT+RKVDWLT KMR  + TVS+ HGDM Q  RD IM EFR G++RVLITTD+ ARG+DVQQVSLVINYDLP   E Y+HRIGRSGRFGRKGVAINFV  DD ++L DI+++Y+  I+E+P NVADL+
Sbjct:  225 ELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTSKMRENNFTVSSMHGDMPQKERDAIMAEFRGGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 391
[Close]
BLAST of CN189434 vs. ExPASy Swiss-Prot
Match: FAL1_SCHPO (ATP-dependent RNA helicase fal1 OS=Schizosaccharomyces pombe GN=tif412 PE=1 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.776e-64
Identity = 114/167 (68.26%), Postives = 143/167 (85.63%), Query Frame = -1 
Query:  209 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 709
            ELTLEG+KQ+++ VEKEEWK +TLCDLY+TL ITQ+VIF N+RRKVDWLT+KMR  + TV++ HG+M Q  RD IM++FR G+SRVLI TD+ ARGIDVQQVSLVINYDLP   ENY+HRIGRSGRFGRKGVAINFVT +D R+L DI+++Y+ VI+E+P N+ D++
Sbjct:  228 ELTLEGLKQYFIAVEKEEWKFDTLCDLYDTLTITQAVIFCNSRRKVDWLTEKMREANFTVTSMHGEMPQKERDAIMQDFRQGNSRVLICTDIWARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVTNEDVRILRDIEQYYSTVIDEMPMNIGDMV 394
The following BLAST results are available for this feature:
BLAST of CN189434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FAL1_PHANO9.418e-6671.26ATP-dependent RNA helicase FAL1 OS=Phaeosphaeria n... [more]
FAL1_NEUCR9.418e-6671.26ATP-dependent RNA helicase fal-1 OS=Neurospora cra... [more]
FAL1_GIBZE9.418e-6671.26ATP-dependent RNA helicase FAL1 OS=Gibberella zeae... [more]
FAL1_MAGGR1.230e-6570.66ATP-dependent RNA helicase FAL1 OS=Magnaporthe gri... [more]
FAL1_BOTFB2.098e-6571.26ATP-dependent RNA helicase fal1 OS=Botryotinia fuc... [more]
IF4A_CAEEL4.674e-6571.26Eukaryotic initiation factor 4A OS=Caenorhabditis ... [more]
RH2_ARATH1.041e-6472.46DEAD-box ATP-dependent RNA helicase 2 OS=Arabidops... [more]
IF4A_CRYPV1.041e-6471.26Eukaryotic initiation factor 4A OS=Cryptosporidium... [more]
IF4A3_NICPL1.776e-6471.26Eukaryotic initiation factor 4A-3 OS=Nicotiana plu... [more]
FAL1_SCHPO1.776e-6468.26ATP-dependent RNA helicase fal1 OS=Schizosaccharom... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001N15_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001N15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189434 ID=CN189434; Name=CN189434; organism=Citrus sinensis; type=EST; length=709bp
CCCTTTTTTTTTCAATGTGCATGACCCATATGATTAAATGGTCGGATATG
TTTGAGAACAACATTAATTTAAGACACTAGACGGAAAGGAAGAAGAAACC
AAAAAAAAAAAAAAAAGGGGAGAAAATATCCACCACATTAAATAGTACTT
GCAAAATCAGGAAACCCCTTCTTGCCTCGACAAACTTACAAAAAACAGAA
CCTCCTCAAAGAAGGTCAGCAACATTTGAAGGCAGCTCCTCAATGACCAC
GTTATAGAACTTTTGAATATCAAAAAGCATTCTCTCATCATCCCTTGTCA
CAAAATTAATGGCAACACCCTTTCTTCCAAATCGACCACTTCGTCCAATA
CGGTGAAGGTAGTTTTCTGGTTGAGTCGGCAGATCATAATTTATGACAAG
TGAAACTTGCTGCACATCAATACCACGAGCCAACAGATCAGTGGTGATGA
GAACACGAGAAGAACCAGAGCGAAATTCACGCATAATGATATCTCGGGTG
TTCTGATCCATGTCCCCATGAGTGGCAGAGACTGTATGGTCACGGCTTCG
CATCTTGTCAGTAAGCCAGTCGACCTTTCGCCGAGTGTTCACAAAGATGA
CACTCTGGGTTATGGCCAGAGTCTCATAAAGATCACAGAGTGTTTCAAGC
TTCCATTCTTCCTTCTCAACATTGACATAAAACTGCTTGATACCCTCAAG
GGTGAGTTC
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