CN189431

Overview
NameCN189431
Unique NameCN189431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length690
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_LACLS (DNA mismatch repair protein mutL OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=mutL PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.307e-20
Identity = 67/227 (29.52%), Postives = 113/227 (49.78%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMEN-EPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            DL  I+++GFRGEAL S+  V  +T+ T       G ++  + G +E  EP A     GT+I V NLFYN  AR K +++   + + I D+++R+++ H  +SF+    G  +  + +         I  +YG+  A  + ++  S+ +      F++ GYVS      A +  + + +N R ++   L RA+   Y         PF  +SI + P+  DVNV PT
Sbjct:   86 DLFRIRTLGFRGEALPSIASVSQMTIETSNAQEEAGTKLIAKGGTIETLEPLAKRL--GTKISVANLFYNTPARLKYIKSLQAELSHITDIINRLSLAHPEISFTLVNEG--KEFLKTAGNGDLRQVIAAIYGIGTAKKMREINGSDLD------FELTGYVSLPELTRANRNYITILINGRFIKNFLLNRAILEGYGNRLMVGRFPFAVLSIKIDPKLADVNVHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_LACLM (DNA mismatch repair protein mutL OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=mutL PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.307e-20
Identity = 67/227 (29.52%), Postives = 113/227 (49.78%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMEN-EPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            DL  I+++GFRGEAL S+  V  +T+ T       G ++  + G +E  EP A     GT+I V NLFYN  AR K +++   + + I D+++R+++ H  +SF+    G  +  + +         I  +YG+  A  + ++  S+ +      F++ GYVS      A +  + + +N R ++   L RA+   Y         PF  +SI + P+  DVNV PT
Sbjct:   86 DLFRIRTLGFRGEALPSIASVSQMTIETSNAQEEAGTKLIAKGGTIETLEPLAKRL--GTKISVANLFYNTPARLKYIKSLQAELSHITDIINRLSLAHPEISFTLVNEG--KEFLKTAGNGDLRQVIAAIYGIGTAKKMREINGSDLD------FELTGYVSLPELTRANRNYITILINGRFIKNFLLNRAILEGYGNRLMVGRFPFAVLSIKIDPKLADVNVHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_GEOSF (DNA mismatch repair protein mutL OS=Geobacter sp. (strain FRC-32) GN=mutL PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.307e-20
Identity = 71/226 (31.42%), Postives = 110/226 (48.67%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            EDL S+ ++GFRGEAL S+  V   T+ T  KG L G  + Y +G    E KAC   +GT I V NLF+N  AR K +++S  +   + DLL+R+AI   ++ F     G     V     +   + + T+ G +++ +L  L   ++ D    V  + G    S   A  + +  ++N R +    ++ AV   Y     +   P + + I VP   VDVNV PT
Sbjct:   86 EDLFSLATLGFRGEALPSVASVSRFTLATREKGSLEGTEI-YAEGGRIKEVKACGMAEGTVISVRNLFFNTPARLKFMKSSETEAGHVGDLLTRLAISRPDIRFIYTNDGKT---VFRALNADLRERVATLLGRTLSQDLYPL---DFCDGQLNVTGLVGKPECSRSAA--SHVYTYINGRFIRDKVVQHAVLQAYRNFMERGRYPVVVLFISVPAAEVDVNVHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_FLAJ1 (DNA mismatch repair protein mutL OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=mutL PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.307e-20
Identity = 63/230 (27.39%), Postives = 111/230 (48.26%), Query Frame = 2
Query:    2 RKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAK-KTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            R+ EDL S+ + GFRGEALAS+  + H+ + T  +    G  +        ++  A    KGT   V+NLF+N+ ARR  L++ + ++  ++D   R+A+ H N+ FS   +G+   ++ +     R+        V + S     +    N+ +  +  + G+V    +  K +     FVNDR ++   L  AV   Y       S+P  ++ + VPP  +D+N+ PT
Sbjct:   83 RQAEDLFSLGTKGFRGEALASIAAIAHMEMKTKQEQDELGTHIVIEGSKFVSQEVAVLP-KGTSFAVKNLFFNIPARRNFLKSDTVEFRHVMDEFQRVALAHPNIHFSFYHNGSELYNLPAAGYRQRI--------VGIMSGKTNEKLVPVNEDTE-IISIQGFVCKPEFAKKNRGEQFFFVNDRFIKSGYLHHAVMAAYDGLLKDGSQPSYFLYLQVPPNTIDINIHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_LACRJ (DNA mismatch repair protein mutL OS=Lactobacillus reuteri (strain JCM 1112) GN=mutL PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.319e-20
Identity = 68/225 (30.22%), Postives = 113/225 (50.22%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685
            DL  +++MGFRGEAL S+  V  VT+TT   G   G  +  R G  E   K   A +GT I V +LF+N  AR K L++   + T+I D+++R+A+ +  V+FS   +G  R    S   ++    +  +YGV     ++++  ++ +      FK+ G+VS      A +  + + +N R +    L +A+   Y +       P   ++I + P  VDVNV P
Sbjct:   86 DLFKVQTMGFRGEALPSIASVADVTLTTAQAGQEEGTMIHLRGG-KELVVKPAGARQGTDIKVTDLFFNTPARLKYLKSPQTELTRITDIINRLALANPAVAFSFTHNG--RELFRSAGNNNLQQVVAAIYGVQAGRKMLEISGADDD------FKVSGFVSLPELTRASRQYITITINHRYIRNFELTKAIIQGYESKLMVGRYPIAVINIDLDPVLVDVNVHP 301          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_LACRD (DNA mismatch repair protein mutL OS=Lactobacillus reuteri (strain DSM 20016) GN=mutL PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.319e-20
Identity = 68/225 (30.22%), Postives = 113/225 (50.22%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685
            DL  +++MGFRGEAL S+  V  VT+TT   G   G  +  R G  E   K   A +GT I V +LF+N  AR K L++   + T+I D+++R+A+ +  V+FS   +G  R    S   ++    +  +YGV     ++++  ++ +      FK+ G+VS      A +  + + +N R +    L +A+   Y +       P   ++I + P  VDVNV P
Sbjct:   86 DLFKVQTMGFRGEALPSIASVADVTLTTAQAGQEEGTMIHLRGG-KELVVKPAGARQGTDIKVTDLFFNTPARLKYLKSPQTELTRITDIINRLALANPAVAFSFTHNG--RELFRSAGNNNLQQVVAAIYGVQAGRKMLEISGADDD------FKVSGFVSLPELTRASRQYITITINHRYIRNFELTKAIIQGYESKLMVGRYPIAVINIDLDPVLVDVNVHP 301          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_BACP2 (DNA mismatch repair protein mutL OS=Bacillus pumilus (strain SAFR-032) GN=mutL PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.319e-20
Identity = 71/226 (31.42%), Postives = 110/226 (48.67%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            DL  ++++GFRGEAL S+  V H+ + T T G   G  +  + G + +E K     +GT+I+V NLFYN  AR K ++    +   I D+++R+A+ H  VS   R  G      +       +  +  +YG +VA  +V L         S  F++ GY+S      A +  M   VN R V+  PL +AV   Y    P    P  ++ + + P  VDVNV P+
Sbjct:   86 DLFRVRTLGFRGEALPSIASVSHLEMKTST-GEGAGTHLVLQGGKIISEKKTSGR-RGTEIVVTNLFYNTPARLKYMKTVHTELGNISDVVNRIALAHPEVSIRLRHQGKVLLQTNGNGDVRHV--LAAIYGTAVAKKMVPLHV------QSLDFEVKGYISLPEVTRASRNYMSSVVNGRYVKHFPLVKAVHEGYHTLLPIGRHPITFIEMKMDPILVDVNVHPS 301          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_HAEI8 (DNA mismatch repair protein mutL OS=Haemophilus influenzae (strain 86-028NP) GN=mutL PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.641e-20
Identity = 65/228 (28.51%), Postives = 118/228 (51.75%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHG-AARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTM-VLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            +DL++I S+GFRGEALAS++ V  +T+T+ T+     ++V  +   ME   K  +   GT + V NLF+N  ARRK L+    ++  I +++ R+A+   N +F+   +G   R    + A + +L  +  + G     N ++++  +++D       + G+V+  N+   +  +   ++N R+V    +  A+   YA   P  + P   + I + P  VDVNV PT
Sbjct:   84 DDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEAWQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIALTKFNTAFTLTHNGKIIRQYRPAEAINQQLKRVAAICGDDFVKNALRID-WKHDD-----LHLSGWVATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDVDVNVHPT 305          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_GEOSL (DNA mismatch repair protein mutL OS=Geobacter sulfurreducens GN=mutL PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.641e-20
Identity = 69/227 (30.40%), Postives = 113/227 (49.78%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLE-ASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            +DL S+ ++GFRGEAL S+  V   T+ T  +G + G  + Y +G    E KAC   +GT + V NLF+N  AR K +++   +   + DL++R+A+    V F+C   G     +      + LD +  + G +VAS L  ++ A+E    +  V + D  VS S      + +  ++N R +    ++ A+   Y     +   P + + I V P  VDVNV PT
Sbjct:   86 DDLFSLATLGFRGEALPSVASVSRFTLATRERGSIEGTEI-YAEGGKIREVKACGMAEGTVVSVRNLFFNTPARLKFMKSVETEGGHVADLVTRLALSRPEVRFTCVSDGKT---LFRALDGTLLDRVAALLGKTVASALHPVDLATEGVRVTGLVARPD--VSRS----AASHLYTYINGRFIRDRVVQHAILQAYRNFLERGRYPVVVLFIEVSPGEVDVNVHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_CHLPB (DNA mismatch repair protein mutL OS=Chlorobium phaeobacteroides (strain BS1) GN=mutL PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.641e-20
Identity = 63/226 (27.88%), Postives = 114/226 (50.44%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSN-SNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685
            E+L ++ ++GFRGEALAS++ V H  + T  +    G ++ Y  GV+    KA A+  GT + V NLFYN+ ARRK L++++ ++  I + +    + +  + +          D  S     RL+     +G   A +L+     E +D + F+  + GYV   S    +K    +++N R+++   L +A++  Y     +   PF+ + + + P+  DVNV P
Sbjct:   85 EELDALTTLGFRGEALASISTVSHFELRTRRENDNVGIQLRYEGGVLSERGKA-ASEPGTAVSVRNLFYNVPARRKFLKSNATEFKHIFESVKAQVLAYPEIQWQMINDDETLFDFRSSDMHERLNFF---FGDDFAGSLI-----EVHDDNDFL-SLHGYVGKPSMQKRQKNEQFIYLNRRVIQNRMLSQALQQAYGELLVERHSPFVLLFLGIDPQQTDVNVHP 300          
The following BLAST results are available for this feature:
BLAST of CN189431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 433
Match NameE-valueIdentityDescription
MUTL_LACLS3.307e-2029.52DNA mismatch repair protein mutL OS=Lactococcus la... [more]
MUTL_LACLM3.307e-2029.52DNA mismatch repair protein mutL OS=Lactococcus la... [more]
MUTL_GEOSF3.307e-2031.42DNA mismatch repair protein mutL OS=Geobacter sp. ... [more]
MUTL_FLAJ13.307e-2027.39DNA mismatch repair protein mutL OS=Flavobacterium... [more]
MUTL_LACRJ4.319e-2030.22DNA mismatch repair protein mutL OS=Lactobacillus ... [more]
MUTL_LACRD4.319e-2030.22DNA mismatch repair protein mutL OS=Lactobacillus ... [more]
MUTL_BACP24.319e-2031.42DNA mismatch repair protein mutL OS=Bacillus pumil... [more]
MUTL_HAEI85.641e-2028.51DNA mismatch repair protein mutL OS=Haemophilus in... [more]
MUTL_GEOSL5.641e-2030.40DNA mismatch repair protein mutL OS=Geobacter sulf... [more]
MUTL_CHLPB5.641e-2027.88DNA mismatch repair protein mutL OS=Chlorobium pha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001N13_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001N13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189431 ID=CN189431; Name=CN189431; organism=Citrus sinensis; type=EST; length=690bp
GAGGAAGTATGAGGACTTGCAATCAATCAAATCCATGGGTTTCAGAGGAG
AGGCTTTGGCAAGCATGACTTACGTCGGCCATGTTACCGTCACAACCATC
ACTAAAGGCCACTTGCACGGTTACCGGGTTTCATATAGAGATGGTGTCAT
GGAGAATGAACCAAAAGCATGTGCTGCTGTCAAAGGCACGCAGATAATGG
TGGAGAATTTGTTTTACAACATGATTGCTCGAAGGAAGACACTGCAAAAT
TCTTCTGATGATTATACAAAAATTGTTGATTTGCTAAGCCGGATGGCCAT
TCACCACACAAATGTGAGCTTCTCTTGCAGAAAGCACGGAGCTGCTAGAG
CAGATGTTCACTCTATTGCTACATCGTCAAGGCTTGATTCTATCAGAACT
GTATATGGAGTGTCGGTTGCTAGTAATTTAGTGCAGTTAGAAGCTTCAGA
GTACAATGATTCCTCAAGTTTTGTTTTCAAGATGGATGGCTACGTTTCCA
ATTCAAATTATGTGGCAAAGAAAACAACAATGGTGCTTTTTGTCAATGAT
AGGTTGGTTGAGTGTGCTCCTTTAAAGAGAGCTGTAGAAATTGTTTATGC
TGCAACCTTCCCTAAAGCATCAAAACCTTTCATCTATATGTCTATAGTGG
TACCACCTGAGCATGTTGATGTGAATGTGCCACCCACAAA
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