CN189431

Overview
NameCN189431
Unique NameCN189431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length690
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_BACA2 (DNA mismatch repair protein mutL OS=Bacillus amyloliquefaciens (strain FZB42) GN=mutL PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.641e-20
Identity = 68/226 (30.09%), Postives = 113/226 (50.00%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            DL  ++++GFRGEAL S+  V H+ + T + G   G  +  + G + +E K+ +  KGT+I+V NLF+N  AR K ++    +   I D+++R+A+ H  VS   R  G      +       +  +  +YG +VA  ++ L        SS  F++ GY++      A +  M   +N R ++  PL +AV   Y    P    P  ++ I + P  VDVNV P+
Sbjct:   86 DLFRVRTLGFRGEALPSIASVSHLEIKT-SIGEGAGTHLILQGGNIISEQKSSSR-KGTEIIVTNLFFNTPARLKYMKTVHTELGNITDVVNRIALAHPEVSIRLRHQGKNLLQTNGNGDVRHV--LAAIYGTAVAKKMIPLHI------SSLDFEVKGYIALPEITRASRNYMSSVINGRYIKNFPLVKAVHEGYHTLLPIGRHPITFIEITMDPILVDVNVHPS 301          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_PELPD (DNA mismatch repair protein mutL OS=Pelobacter propionicus (strain DSM 2379) GN=mutL PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.368e-20
Identity = 68/231 (29.44%), Postives = 108/231 (46.75%), Query Frame = 2
Query:    2 RKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLF--VNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            R   DL  I ++GFRGEAL S+  V  + +++       G  +    G +  + +AC    GT I VE +F+N  AR K L+++  +   + D L+RMAI   +V+FSC   G    D+  +     L  +    G   A++L +L  S           + GY+S S    + TT  +F  +N R +    ++ A+   Y     +   P + + I +PP  VDVNV PT
Sbjct:   83 RSDNDLDGIHTLGFRGEALPSVASVSRLRLSSRETDSPEGTEIIVEGGKVR-DVRACGMAPGTVISVEQIFFNTPARLKFLRSAETEAGHVGDCLTRMAISRPDVAFSCSSDG---RDLLRVQRGDLLRRLSQALGKGTAASLHELHLSRDG------IDISGYIS-SPAACRSTTSAMFTYINGRFIRDKVIQHAIMQAYRGVMDRGRYPVVALFIQLPPAEVDVNVHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_LACBA (DNA mismatch repair protein mutL OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=mutL PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.623e-20
Identity = 73/226 (32.30%), Postives = 113/226 (50.00%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            DL  IKS+GFRGEAL S+  V  VT+ T T G   G  +    G+++ E KA  A KGT ++V+ LF N+ AR K L++ + +  +I D+++R+A+ +  V+FS   +G  R    +         I  +YGV  A  +V +     +      F++ GYVS      A +  + L +N R +    L +A+   Y +       P   + I + P  VDVNV PT
Sbjct:   86 DLFRIKSLGFRGEALPSIASVADVTLITSTGG--VGTEIHNVGGIIQ-EHKAAEARKGTTVIVKELFGNVPARLKYLKSPATELARITDIVNRLALSYPTVAFSLVHNG--RELTRTTGRGDLQQVIAGIYGVQSARKMVAISGQNPD------FRVSGYVSLPELTRASRQYISLLLNGRYIHNFQLSKALIAGYGSKLMVGRYPLAVLDIQMDPLLVDVNVHPT 300          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_HAEIE (DNA mismatch repair protein mutL OS=Haemophilus influenzae (strain PittEE) GN=mutL PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.623e-20
Identity = 64/228 (28.07%), Postives = 117/228 (51.32%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHG-AARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTM-VLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            +DL++I S+GFRGEALAS++ V  +T+T+ T+     ++V  +   ME   K  +   GT + V NLF+N  ARRK L+    ++  I +++ R+A+   N +F+   +G   R    +   + +L  +  + G     N ++++  +++D       + G+V+  N+   +  +   ++N R+V    +  A+   YA   P  + P   + I + P  VDVNV PT
Sbjct:   84 DDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEAWQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIALTKFNTAFTLTHNGKIVRQYRPAFDLNQQLKRVAVICGDDFVKNALRID-WKHDD-----LHLSGWVATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDVDVNVHPT 305          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STRS7 (DNA mismatch repair protein mutL OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=mutL PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.257e-19
Identity = 62/230 (26.96%), Postives = 117/230 (50.87%), Query Frame = 2
Query:    2 RKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            +   DL  I+++GFRGEAL S+  +  +T+ T T    HG  +    G +E + +A +   GT+I VENLFYN  AR K +++   +   +VD+++R+++ H  ++F+    G  +    +  T     ++  +YG++ A  ++ + +++ +      F++ G+VS      A +  + + +N R ++   L RA+   Y +       P   + I + P   DVNV PT
Sbjct:   82 KSQSDLFRIRTLGFRGEALPSVASISKLTIKTATAEAEHGSILVASGGKIE-QLEAVSTPVGTKIKVENLFYNTPARLKYMKSLQAELAHVVDVVNRLSLAHPEIAFTLISDG--KQLTQTSGTGDLRQALAGIYGLNTAKKMIDISSADLD------FEVGGFVSLPELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STREM (DNA mismatch repair protein mutL OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=mutL PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.257e-19
Identity = 62/230 (26.96%), Postives = 117/230 (50.87%), Query Frame = 2
Query:    2 RKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            +   DL  I+++GFRGEAL S+  +  +T+ T T    HG  +    G +E + +A +   GT+I VENLFYN  AR K +++   +   +VD+++R+++ H  ++F+    G  +    +  T     ++  +YG++ A  ++ + +++ +      F++ G+VS      A +  + + +N R ++   L RA+   Y +       P   + I + P   DVNV PT
Sbjct:   82 KSQSDLFRIRTLGFRGEALPSVASISKLTIKTATAEAEHGSILVASGGKIE-QLEAVSTPVGTKIKVENLFYNTPARLKYMKSLQAELAHVVDVVNRLSLAHPEIAFTLISDG--KQLTQTSGTGDLRQALAGIYGLNTAKKMIDISSADLD------FEVGGFVSLPELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_FLAPJ (DNA mismatch repair protein mutL OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=mutL PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.257e-19
Identity = 61/230 (26.52%), Postives = 111/230 (48.26%), Query Frame = 2
Query:    2 RKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAK-KTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            R+ EDL  + + GFRGEALAS+  + HV + T       G  +        ++  A    KGT  +V+NLF+N+ ARR  L++   +   I+D   R+A+ H N+ F+   +G   +++ ++  S+    I  ++       LV ++       ++ +  + G++    +  K K     FVNDR ++   L  A+   Y       ++P  ++ + VPP  +D+N+ PT
Sbjct:   83 RQAEDLFDLHTKGFRGEALASIAAIAHVEMKTKQDQEELGTHIIIEGSKFVSQDVAVLP-KGTSFLVKNLFFNIPARRNFLKSDIVELRHIIDEFQRVALAHHNIHFTFYHNG---SELFNLPQSNVRQRIVNIFSGKTNEKLVPIQ------ENTDILSIQGFIGKPEFAKKSKGEQFFFVNDRFIKSGYLHHAIMNAYEGLLRDGAQPSYFLYLDVPPHTIDINIHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_METMJ (DNA mismatch repair protein mutL OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=mutL PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.641e-19
Identity = 71/232 (30.60%), Postives = 114/232 (49.14%), Query Frame = 2
Query:    2 RKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGH--LHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSN-SNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            R   DL +++++GFRGEALAS+  V  VT+ T  +G   L G R+  R G +  E     A +GT I VE LFYN  ARRK L++ + +   +  ++  +A+ H  V+F    +G  R  + +  +   L++I  +YG  +A +LV +E             + GY+S  S      + + + +N R +    +  AV   Y    PK   P  ++ + +    VDVNV PT
Sbjct:   84 RDIADLSAVRTLGFRGEALASIAAVAEVTLVTRPRGGGALAGTRLVVRGGEIV-EKSEVGAPEGTTIAVERLFYNTPARRKFLKSRNTELAHVYAVVESLALAHGEVAFRVVHNGKER--MATQRSGGALNTIAGLYGADLARSLVPVE------GRLPFLAIRGYISRPSESRGNPSQISVSINGRSIASRQIAAAVREGYGTLLPKDRYPVAFLDLAIDTGLVDVNVHPT 306          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_CLOTE (DNA mismatch repair protein mutL OS=Clostridium tetani GN=mutL PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.641e-19
Identity = 63/227 (27.75%), Postives = 115/227 (50.66%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            +D+ S+ +MGFRGEAL S+  +  + + +       G  + Y +G             GT I V +LFYN+ AR K L++SS + + I D++ R+++ + +++F    +G  +  +++  + +  D+IR +YG     N+       Y +S S +  + GY+ N+      +    +FVN R ++   +  AVE  + +       PF  + I + PE++DVNV PT
Sbjct:   85 DDIFSLNTMGFRGEALPSIASISKILLKSKPLSETSGKEI-YMEGGNFISFNDVGMNTGTTIKVTDLFYNVPARLKFLKSSSRESSLISDIIQRLSLANPDIAFKLINNG--KTVLNTYGSGNLEDAIRVIYGKKTLENI------SYFESHSDIISVYGYIGNAELSRGSRNNQSIFVNKRYIKSGLITAAVENAFKSFLTINKFPFFVIFIDIFPEYIDVNVHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_ANOFW (DNA mismatch repair protein mutL OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=mutL PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.641e-19
Identity = 65/225 (28.89%), Postives = 113/225 (50.22%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685
            DL  I+++GFRGEAL S+  V H+ + T T G   G  +  + G +    +  +  KGT I V +LF+N  AR K ++    +   +VD+++R+A+ H ++SF    +G  +   ++         +  +YG+ VA  ++ + A   +      F +DGYV+      A +  M   VN R ++   L +A+E  Y    P    P  +++I++ P  +DVNV P
Sbjct:   86 DLFRIRTLGFRGEALPSIASVSHLELKTST-GEGPGTWLVLKGGELVQHGRTSSR-KGTDITVSHLFFNTPARLKYMKTIHTELGHVVDVINRLALAHPHISFRLTHNG--KQLFYTNGNGDVRQVLAAIYGLDVAKKMIAIHAETLD------FTIDGYVALPEVTRASRNYMTTIVNGRYIKNYSLYKAIEEGYHTLLPIGRHPITFLNIMMDPLLIDVNVHP 300          
The following BLAST results are available for this feature:
BLAST of CN189431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 433
Match NameE-valueIdentityDescription
MUTL_BACA25.641e-2030.09DNA mismatch repair protein mutL OS=Bacillus amylo... [more]
MUTL_PELPD7.368e-2029.44DNA mismatch repair protein mutL OS=Pelobacter pro... [more]
MUTL_LACBA9.623e-2032.30DNA mismatch repair protein mutL OS=Lactobacillus ... [more]
MUTL_HAEIE9.623e-2028.07DNA mismatch repair protein mutL OS=Haemophilus in... [more]
MUTL_STRS71.257e-1926.96DNA mismatch repair protein mutL OS=Streptococcus ... [more]
MUTL_STREM1.257e-1926.96DNA mismatch repair protein mutL OS=Streptococcus ... [more]
MUTL_FLAPJ1.257e-1926.52DNA mismatch repair protein mutL OS=Flavobacterium... [more]
MUTL_METMJ1.641e-1930.60DNA mismatch repair protein mutL OS=Methanoculleus... [more]
MUTL_CLOTE1.641e-1927.75DNA mismatch repair protein mutL OS=Clostridium te... [more]
MUTL_ANOFW1.641e-1928.89DNA mismatch repair protein mutL OS=Anoxybacillus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001N13_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001N13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189431 ID=CN189431; Name=CN189431; organism=Citrus sinensis; type=EST; length=690bp
GAGGAAGTATGAGGACTTGCAATCAATCAAATCCATGGGTTTCAGAGGAG
AGGCTTTGGCAAGCATGACTTACGTCGGCCATGTTACCGTCACAACCATC
ACTAAAGGCCACTTGCACGGTTACCGGGTTTCATATAGAGATGGTGTCAT
GGAGAATGAACCAAAAGCATGTGCTGCTGTCAAAGGCACGCAGATAATGG
TGGAGAATTTGTTTTACAACATGATTGCTCGAAGGAAGACACTGCAAAAT
TCTTCTGATGATTATACAAAAATTGTTGATTTGCTAAGCCGGATGGCCAT
TCACCACACAAATGTGAGCTTCTCTTGCAGAAAGCACGGAGCTGCTAGAG
CAGATGTTCACTCTATTGCTACATCGTCAAGGCTTGATTCTATCAGAACT
GTATATGGAGTGTCGGTTGCTAGTAATTTAGTGCAGTTAGAAGCTTCAGA
GTACAATGATTCCTCAAGTTTTGTTTTCAAGATGGATGGCTACGTTTCCA
ATTCAAATTATGTGGCAAAGAAAACAACAATGGTGCTTTTTGTCAATGAT
AGGTTGGTTGAGTGTGCTCCTTTAAAGAGAGCTGTAGAAATTGTTTATGC
TGCAACCTTCCCTAAAGCATCAAAACCTTTCATCTATATGTCTATAGTGG
TACCACCTGAGCATGTTGATGTGAATGTGCCACCCACAAA
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