CN189431

Overview
NameCN189431
Unique NameCN189431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length690
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_PELPB (DNA mismatch repair protein mutL OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=mutL PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.435e-23
Identity = 70/226 (30.97%), Postives = 119/226 (52.65%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSN-SNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685
            +DL S++S+GFRGEALAS++ V H  + T T     G R+ Y  GV+  E       +GT I V NLFYN+ ARRK L++++ +Y  I +++   A+ +  + +   +  +   ++  +     L+ +   YG   A+++++L  SE ND  S    + GY+   +    +K     FVN R+V+   L +AV+  Y     +   PF+ + + + P  +DVNV P
Sbjct:   85 DDLDSLQSLGFRGEALASISSVSHFELKTRTAKATLGLRLRYEGGVLVEE-SGVQGEQGTTISVRNLFYNVPARRKFLKSNATEYNHIFEIVKSFALAYPEIEW---RMYSDDEELFHVKRPDILERLNVFYGDDFAASMIEL--SEENDYLS----IKGYLGKPAMQKRRKLDQYFFVNRRVVQNRMLSQAVQQAYGDLLVERQTPFVLLFLTIDPSRIDVNVHP 300          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STAAW (DNA mismatch repair protein mutL OS=Staphylococcus aureus (strain MW2) GN=mutL PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23
Identity = 75/228 (32.89%), Postives = 124/228 (54.39%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQL--EASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            EDL  I+++GFRGEALAS++ V  VT+ T T  + +G  +   +G + N  K   A KGT I+VE+LFYN  AR K +++   +  KI D+++RMA+ H ++  +    G      +    ++ +  +  +YG+ VA +LV +  + S+Y+    FV K +   SN +Y++      +F+N R ++   L +A+   Y         P  Y++I + P  VDVNV PT
Sbjct:   85 EDLFHIRTLGFRGEALASISSVAKVTLKTCTD-NANGNEIYVENGEILNH-KPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSHPDIRIALISDGKTMLSTNGSGRTNEV--MAEIYGMKVARDLVHISGDTSDYH-IEGFVAKPEHSRSNKHYIS------IFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNVHPT 301          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STAAT (DNA mismatch repair protein mutL OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=mutL PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23
Identity = 75/228 (32.89%), Postives = 124/228 (54.39%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQL--EASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            EDL  I+++GFRGEALAS++ V  VT+ T T  + +G  +   +G + N  K   A KGT I+VE+LFYN  AR K +++   +  KI D+++RMA+ H ++  +    G      +    ++ +  +  +YG+ VA +LV +  + S+Y+    FV K +   SN +Y++      +F+N R ++   L +A+   Y         P  Y++I + P  VDVNV PT
Sbjct:   85 EDLFHIRTLGFRGEALASISSVAKVTLKTCTD-NANGNEIYVENGEILNH-KPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSHPDIRIALISDGKTMLSTNGSGRTNEV--MAEIYGMKVARDLVHISGDTSDYH-IEGFVAKPEHSRSNKHYIS------IFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNVHPT 301          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STAAS (DNA mismatch repair protein mutL OS=Staphylococcus aureus (strain MSSA476) GN=mutL PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23
Identity = 75/228 (32.89%), Postives = 124/228 (54.39%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQL--EASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            EDL  I+++GFRGEALAS++ V  VT+ T T  + +G  +   +G + N  K   A KGT I+VE+LFYN  AR K +++   +  KI D+++RMA+ H ++  +    G      +    ++ +  +  +YG+ VA +LV +  + S+Y+    FV K +   SN +Y++      +F+N R ++   L +A+   Y         P  Y++I + P  VDVNV PT
Sbjct:   85 EDLFHIRTLGFRGEALASISSVAKVTLKTCTD-NANGNEIYVENGEILNH-KPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSHPDIRIALISDGKTMLSTNGSGRTNEV--MAEIYGMKVARDLVHISGDTSDYH-IEGFVAKPEHSRSNKHYIS------IFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNVHPT 301          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STAAR (DNA mismatch repair protein mutL OS=Staphylococcus aureus (strain MRSA252) GN=mutL PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23
Identity = 75/228 (32.89%), Postives = 124/228 (54.39%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQL--EASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            EDL  I+++GFRGEALAS++ V  VT+ T T  + +G  +   +G + N  K   A KGT I+VE+LFYN  AR K +++   +  KI D+++RMA+ H ++  +    G      +    ++ +  +  +YG+ VA +LV +  + S+Y+    FV K +   SN +Y++      +F+N R ++   L +A+   Y         P  Y++I + P  VDVNV PT
Sbjct:   85 EDLFHIRTLGFRGEALASISSVAKVTLKTCTD-NANGNEIYVENGEILNH-KPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSHPDIRIALISDGKTMLSTNGSGRTNEV--MAEIYGMKVARDLVHISGDTSDYH-IEGFVAKPEHSRSNKHYIS------IFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNVHPT 301          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STAAN (DNA mismatch repair protein mutL OS=Staphylococcus aureus (strain N315) GN=mutL PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23
Identity = 75/228 (32.89%), Postives = 124/228 (54.39%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQL--EASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            EDL  I+++GFRGEALAS++ V  VT+ T T  + +G  +   +G + N  K   A KGT I+VE+LFYN  AR K +++   +  KI D+++RMA+ H ++  +    G      +    ++ +  +  +YG+ VA +LV +  + S+Y+    FV K +   SN +Y++      +F+N R ++   L +A+   Y         P  Y++I + P  VDVNV PT
Sbjct:   85 EDLFHIRTLGFRGEALASISSVAKVTLKTCTD-NANGNEIYVENGEILNH-KPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSHPDIRIALISDGKTMLSTNGSGRTNEV--MAEIYGMKVARDLVHISGDTSDYH-IEGFVAKPEHSRSNKHYIS------IFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNVHPT 301          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STAAM (DNA mismatch repair protein mutL OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=mutL PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23
Identity = 75/228 (32.89%), Postives = 124/228 (54.39%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQL--EASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            EDL  I+++GFRGEALAS++ V  VT+ T T  + +G  +   +G + N  K   A KGT I+VE+LFYN  AR K +++   +  KI D+++RMA+ H ++  +    G      +    ++ +  +  +YG+ VA +LV +  + S+Y+    FV K +   SN +Y++      +F+N R ++   L +A+   Y         P  Y++I + P  VDVNV PT
Sbjct:   85 EDLFHIRTLGFRGEALASISSVAKVTLKTCTD-NANGNEIYVENGEILNH-KPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSHPDIRIALISDGKTMLSTNGSGRTNEV--MAEIYGMKVARDLVHISGDTSDYH-IEGFVAKPEHSRSNKHYIS------IFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNVHPT 301          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STAAE (DNA mismatch repair protein mutL OS=Staphylococcus aureus (strain Newman) GN=mutL PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23
Identity = 75/228 (32.89%), Postives = 124/228 (54.39%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQL--EASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            EDL  I+++GFRGEALAS++ V  VT+ T T  + +G  +   +G + N  K   A KGT I+VE+LFYN  AR K +++   +  KI D+++RMA+ H ++  +    G      +    ++ +  +  +YG+ VA +LV +  + S+Y+    FV K +   SN +Y++      +F+N R ++   L +A+   Y         P  Y++I + P  VDVNV PT
Sbjct:   85 EDLFHIRTLGFRGEALASISSVAKVTLKTCTD-NANGNEIYVENGEILNH-KPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSHPDIRIALISDGKTMLSTNGSGRTNEV--MAEIYGMKVARDLVHISGDTSDYH-IEGFVAKPEHSRSNKHYIS------IFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNVHPT 301          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STAAC (DNA mismatch repair protein mutL OS=Staphylococcus aureus (strain COL) GN=mutL PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23
Identity = 75/228 (32.89%), Postives = 124/228 (54.39%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQL--EASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            EDL  I+++GFRGEALAS++ V  VT+ T T  + +G  +   +G + N  K   A KGT I+VE+LFYN  AR K +++   +  KI D+++RMA+ H ++  +    G      +    ++ +  +  +YG+ VA +LV +  + S+Y+    FV K +   SN +Y++      +F+N R ++   L +A+   Y         P  Y++I + P  VDVNV PT
Sbjct:   85 EDLFHIRTLGFRGEALASISSVAKVTLKTCTD-NANGNEIYVENGEILNH-KPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSHPDIRIALISDGKTMLSTNGSGRTNEV--MAEIYGMKVARDLVHISGDTSDYH-IEGFVAKPEHSRSNKHYIS------IFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNVHPT 301          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STAA8 (DNA mismatch repair protein mutL OS=Staphylococcus aureus (strain NCTC 8325) GN=mutL PE=3 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23
Identity = 75/228 (32.89%), Postives = 124/228 (54.39%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQL--EASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            EDL  I+++GFRGEALAS++ V  VT+ T T  + +G  +   +G + N  K   A KGT I+VE+LFYN  AR K +++   +  KI D+++RMA+ H ++  +    G      +    ++ +  +  +YG+ VA +LV +  + S+Y+    FV K +   SN +Y++      +F+N R ++   L +A+   Y         P  Y++I + P  VDVNV PT
Sbjct:   85 EDLFHIRTLGFRGEALASISSVAKVTLKTCTD-NANGNEIYVENGEILNH-KPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSHPDIRIALISDGKTMLSTNGSGRTNEV--MAEIYGMKVARDLVHISGDTSDYH-IEGFVAKPEHSRSNKHYIS------IFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNVHPT 301          
The following BLAST results are available for this feature:
BLAST of CN189431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 433
Match NameE-valueIdentityDescription
MUTL_PELPB1.435e-2330.97DNA mismatch repair protein mutL OS=Pelodictyon ph... [more]
MUTL_STAAW2.447e-2332.89DNA mismatch repair protein mutL OS=Staphylococcus... [more]
MUTL_STAAT2.447e-2332.89DNA mismatch repair protein mutL OS=Staphylococcus... [more]
MUTL_STAAS2.447e-2332.89DNA mismatch repair protein mutL OS=Staphylococcus... [more]
MUTL_STAAR2.447e-2332.89DNA mismatch repair protein mutL OS=Staphylococcus... [more]
MUTL_STAAN2.447e-2332.89DNA mismatch repair protein mutL OS=Staphylococcus... [more]
MUTL_STAAM2.447e-2332.89DNA mismatch repair protein mutL OS=Staphylococcus... [more]
MUTL_STAAE2.447e-2332.89DNA mismatch repair protein mutL OS=Staphylococcus... [more]
MUTL_STAAC2.447e-2332.89DNA mismatch repair protein mutL OS=Staphylococcus... [more]
MUTL_STAA82.447e-2332.89DNA mismatch repair protein mutL OS=Staphylococcus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001N13_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001N13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189431 ID=CN189431; Name=CN189431; organism=Citrus sinensis; type=EST; length=690bp
GAGGAAGTATGAGGACTTGCAATCAATCAAATCCATGGGTTTCAGAGGAG
AGGCTTTGGCAAGCATGACTTACGTCGGCCATGTTACCGTCACAACCATC
ACTAAAGGCCACTTGCACGGTTACCGGGTTTCATATAGAGATGGTGTCAT
GGAGAATGAACCAAAAGCATGTGCTGCTGTCAAAGGCACGCAGATAATGG
TGGAGAATTTGTTTTACAACATGATTGCTCGAAGGAAGACACTGCAAAAT
TCTTCTGATGATTATACAAAAATTGTTGATTTGCTAAGCCGGATGGCCAT
TCACCACACAAATGTGAGCTTCTCTTGCAGAAAGCACGGAGCTGCTAGAG
CAGATGTTCACTCTATTGCTACATCGTCAAGGCTTGATTCTATCAGAACT
GTATATGGAGTGTCGGTTGCTAGTAATTTAGTGCAGTTAGAAGCTTCAGA
GTACAATGATTCCTCAAGTTTTGTTTTCAAGATGGATGGCTACGTTTCCA
ATTCAAATTATGTGGCAAAGAAAACAACAATGGTGCTTTTTGTCAATGAT
AGGTTGGTTGAGTGTGCTCCTTTAAAGAGAGCTGTAGAAATTGTTTATGC
TGCAACCTTCCCTAAAGCATCAAAACCTTTCATCTATATGTCTATAGTGG
TACCACCTGAGCATGTTGATGTGAATGTGCCACCCACAAA
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