CN189431

Overview
NameCN189431
Unique NameCN189431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length690
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STAA3 (DNA mismatch repair protein mutL OS=Staphylococcus aureus (strain USA300) GN=mutL PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23
Identity = 75/228 (32.89%), Postives = 124/228 (54.39%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQL--EASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            EDL  I+++GFRGEALAS++ V  VT+ T T  + +G  +   +G + N  K   A KGT I+VE+LFYN  AR K +++   +  KI D+++RMA+ H ++  +    G      +    ++ +  +  +YG+ VA +LV +  + S+Y+    FV K +   SN +Y++      +F+N R ++   L +A+   Y         P  Y++I + P  VDVNV PT
Sbjct:   85 EDLFHIRTLGFRGEALASISSVAKVTLKTCTD-NANGNEIYVENGEILNH-KPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSHPDIRIALISDGKTMLSTNGSGRTNEV--MAEIYGMKVARDLVHISGDTSDYH-IEGFVAKPEHSRSNKHYIS------IFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNVHPT 301          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STAA2 (DNA mismatch repair protein mutL OS=Staphylococcus aureus (strain JH1) GN=mutL PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23
Identity = 75/228 (32.89%), Postives = 124/228 (54.39%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQL--EASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            EDL  I+++GFRGEALAS++ V  VT+ T T  + +G  +   +G + N  K   A KGT I+VE+LFYN  AR K +++   +  KI D+++RMA+ H ++  +    G      +    ++ +  +  +YG+ VA +LV +  + S+Y+    FV K +   SN +Y++      +F+N R ++   L +A+   Y         P  Y++I + P  VDVNV PT
Sbjct:   85 EDLFHIRTLGFRGEALASISSVAKVTLKTCTD-NANGNEIYVENGEILNH-KPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSHPDIRIALISDGKTMLSTNGSGRTNEV--MAEIYGMKVARDLVHISGDTSDYH-IEGFVAKPEHSRSNKHYIS------IFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNVHPT 301          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STAA1 (DNA mismatch repair protein mutL OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=mutL PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23
Identity = 75/228 (32.89%), Postives = 124/228 (54.39%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQL--EASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            EDL  I+++GFRGEALAS++ V  VT+ T T  + +G  +   +G + N  K   A KGT I+VE+LFYN  AR K +++   +  KI D+++RMA+ H ++  +    G      +    ++ +  +  +YG+ VA +LV +  + S+Y+    FV K +   SN +Y++      +F+N R ++   L +A+   Y         P  Y++I + P  VDVNV PT
Sbjct:   85 EDLFHIRTLGFRGEALASISSVAKVTLKTCTD-NANGNEIYVENGEILNH-KPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSHPDIRIALISDGKTMLSTNGSGRTNEV--MAEIYGMKVARDLVHISGDTSDYH-IEGFVAKPEHSRSNKHYIS------IFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNVHPT 301          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_GEOTN (DNA mismatch repair protein mutL OS=Geobacillus thermodenitrificans (strain NG80-2) GN=mutL PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23
Identity = 77/228 (33.77%), Postives = 115/228 (50.44%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLD---SIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685
            DL  I+++GFRGEAL S+  V  V + T T G   G ++  + G +    +A A  KGT I V NLF+N  AR K ++    +     D+++R+A+ H +VSF  R HG        +AT+   D    +  +YG+  A  ++ +EA       S  F + GY+S      A +  M L VN R V   PL +A+E  Y    P    P ++++I + P  VDVNV P
Sbjct:   86 DLFRIRTLGFRGEALPSIASVSEVELVTST-GSGPGTKLVLKGGALVARERA-AGRKGTDITVSNLFFNTPARLKYMKTIHTELGHAADVVNRLALAHPDVSFRLRHHGKT-----LLATNGSGDVRHVLAAIYGMETAKQMIPIEA------ESLDFTVRGYISLPEVTRASRNYMSLIVNGRYVRNIPLMKAIEAGYHTLLPIGRYPIVFLAIEMDPVLVDVNVHP 300          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_CLOB6 (DNA mismatch repair protein mutL OS=Clostridium botulinum (strain 657 / Type Ba4) GN=mutL PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.196e-23
Identity = 72/227 (31.72%), Postives = 116/227 (51.10%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAK-KTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            ED+  I +MGFRGEALAS++ V    + +    +  G  +    G +E        V GT I V +LFYN+ AR K L+++  D + I D+++R  + H ++SF+    G  +  + S  T +  DSIR VY  +++ NL+  E      +   +  + G++       K +T   +FVN R V+   +  AVE  + +     S PF  + I + PE++DVNV PT
Sbjct:   85 EDIYKISTMGFRGEALASISSVSKTKLKSRVDSYNFGKEIYIEGGKIEYLKDTGCNV-GTTIEVSDLFYNVPARLKFLKSARSDSSAISDIVNRFILAHPDISFNLINKG--KQSIKSYGTGNLKDSIRCVYNKTISENLINFE------NHKDIISVYGFIGKPEISRKSRTNQSIFVNKRYVKSKFITAAVENAFKSFLTVNSYPFFVIFIDIFPEYIDVNVHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_GEOKA (DNA mismatch repair protein mutL OS=Geobacillus kaustophilus GN=mutL PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23
Identity = 77/228 (33.77%), Postives = 116/228 (50.88%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLD---SIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685
            DL  I+++GFRGEAL S+  V  V +TT T G   G ++  + G + +  +A A  KGT I V NLF+N  AR K ++    +     D+++R+A+ H +VSF  R  G        +AT+   D    +  +YG   A  ++ +EA       S  F + GY+S  +   A +  + L VN R V   PL +A+E  Y    P    P +++SI + P  VDVNV P
Sbjct:   86 DLFRIRTLGFRGEALPSIASVSEVELTTGT-GSGPGTKLVLQGGALVSRERA-AGRKGTDITVSNLFFNTPARLKYMKTIHTELGHAADVVNRLALAHPDVSFRLRHQGKT-----LLATNGSGDVRHVLAAIYGAETARQMIPIEA------ESLDFTIRGYISPPDVTRASRNYISLVVNGRYVRSVPLMKAIEAGYHTLLPIGRYPIVFLSIEMDPVLVDVNVHP 300          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STRMU (DNA mismatch repair protein mutL OS=Streptococcus mutans GN=mutL PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.451e-23
Identity = 65/230 (28.26%), Postives = 121/230 (52.61%), Query Frame = 2
Query:    2 RKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            +K  DL  I+++GFRGEAL S+  +  +T+ T TKG ++G  +    G +E E +A +   GT++ VENLF+N  AR K +++   +   I+D+++R+++ H  ++F+    G  R    +        ++  +YGV++A  +V++  ++ +      F++ GY+S      A +  + + +N R ++   L RA+   Y +       P   + I + P   DVNV PT
Sbjct:   82 KKQSDLFRIRTLGFRGEALPSIASISRLTLKTATKGEIYGTLLIANGGKIEKE-EAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHIIDVINRLSLAHPEIAFTLINDG--RELTKTAGKGDLRQALAGIYGVTIAKKMVEISNADLD------FEVSGYISLPELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_MACCJ (DNA mismatch repair protein mutL OS=Macrococcus caseolyticus (strain JCSC5402) GN=mutL PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.120e-23
Identity = 78/227 (34.36%), Postives = 119/227 (52.42%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQL--EASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            DL  I+S+GFRGEALAS+  V  V VTT   G + G ++   DG   N   A A  +GT+I VE+LFYN  AR K +++   +  KI D+++R  I    + F+    G  R  + S       +++  VYG+ +A +LV++     +Y +   F+ K +   SN +Y      M LF+N R ++   L +A+   Y    P    P + ++IV+ P  VDVNV PT
Sbjct:   86 DLFHIRSLGFRGEALASIASVSKVRVTTCHDGSI-GRQIDVIDGETVNRTLAQAR-QGTEITVESLFYNTPARLKYVKSLHTELGKITDIINRFVISFPYIKFTLVADG--RVLIASNGNGKMQEAMAVVYGMKIAQDLVEVNGRTGDY-EVHGFIAKPEHTRSNRHY------MSLFINGRYIKNFMLTKAILSGYHTLLPVGRYPILAINIVMDPALVDVNVHPT 301          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STAS1 (DNA mismatch repair protein mutL OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=mutL PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.299e-23
Identity = 74/228 (32.46%), Postives = 125/228 (54.82%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQL--EASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            +DL  I+++GFRGEALAS++ V  VT++T T     G ++   +G + ++ K   A +GT I+VE+LFYN  AR K +++   +  KI D+++RMA+ H ++  S    G      +    ++ + S   +YG+ VA +LV +  + S+Y+    FV K +   SN +Y++      +F+N R ++   L +A+   Y         P  Y++I + P  VDVNV PT
Sbjct:   85 DDLFHIRTLGFRGEALASISSVAKVTLSTCTDNE-EGQQIYVENGEILDQ-KPAKAKRGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSHPDIRISLISDGKTIMKTNGSGRTNEVMS--EIYGMKVAKDLVHISGDTSDYH-LEGFVAKPEHSRSNKHYIS------IFINGRYIKNFLLNKAILEGYHTLLMIGRYPICYINIEMDPILVDVNVHPT 301          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_NEIG1 (DNA mismatch repair protein mutL OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=mutL PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.299e-23
Identity = 70/226 (30.97%), Postives = 111/226 (49.12%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKT-TMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            DL+ + SMGFRGE LAS+  V  +T+T+  +   H  +V   DG + + P A A   GT I    LF+N  ARRK L++ + +Y     +L R+A+ H +++FS ++ G     V  +   S  + I  + G    +  +++      DS +   ++ G ++   +   KT     FVN R V    +  AV+  Y      A  P   + + +PPE VDVNV PT
Sbjct:   86 DLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQVKAEDGKLSS-PTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAHPHIAFSLKRDG---KQVFKLPAQSLHERIAAIVGDDFQTASLEI------DSGNSALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLELPPEAVDVNVHPT 301          
The following BLAST results are available for this feature:
BLAST of CN189431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 433
Match NameE-valueIdentityDescription
MUTL_STAA32.447e-2332.89DNA mismatch repair protein mutL OS=Staphylococcus... [more]
MUTL_STAA22.447e-2332.89DNA mismatch repair protein mutL OS=Staphylococcus... [more]
MUTL_STAA12.447e-2332.89DNA mismatch repair protein mutL OS=Staphylococcus... [more]
MUTL_GEOTN2.447e-2333.77DNA mismatch repair protein mutL OS=Geobacillus th... [more]
MUTL_CLOB63.196e-2331.72DNA mismatch repair protein mutL OS=Clostridium bo... [more]
MUTL_GEOKA4.174e-2333.77DNA mismatch repair protein mutL OS=Geobacillus ka... [more]
MUTL_STRMU5.451e-2328.26DNA mismatch repair protein mutL OS=Streptococcus ... [more]
MUTL_MACCJ7.120e-2334.36DNA mismatch repair protein mutL OS=Macrococcus ca... [more]
MUTL_STAS19.299e-2332.46DNA mismatch repair protein mutL OS=Staphylococcus... [more]
MUTL_NEIG19.299e-2330.97DNA mismatch repair protein mutL OS=Neisseria gono... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001N13_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001N13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189431 ID=CN189431; Name=CN189431; organism=Citrus sinensis; type=EST; length=690bp
GAGGAAGTATGAGGACTTGCAATCAATCAAATCCATGGGTTTCAGAGGAG
AGGCTTTGGCAAGCATGACTTACGTCGGCCATGTTACCGTCACAACCATC
ACTAAAGGCCACTTGCACGGTTACCGGGTTTCATATAGAGATGGTGTCAT
GGAGAATGAACCAAAAGCATGTGCTGCTGTCAAAGGCACGCAGATAATGG
TGGAGAATTTGTTTTACAACATGATTGCTCGAAGGAAGACACTGCAAAAT
TCTTCTGATGATTATACAAAAATTGTTGATTTGCTAAGCCGGATGGCCAT
TCACCACACAAATGTGAGCTTCTCTTGCAGAAAGCACGGAGCTGCTAGAG
CAGATGTTCACTCTATTGCTACATCGTCAAGGCTTGATTCTATCAGAACT
GTATATGGAGTGTCGGTTGCTAGTAATTTAGTGCAGTTAGAAGCTTCAGA
GTACAATGATTCCTCAAGTTTTGTTTTCAAGATGGATGGCTACGTTTCCA
ATTCAAATTATGTGGCAAAGAAAACAACAATGGTGCTTTTTGTCAATGAT
AGGTTGGTTGAGTGTGCTCCTTTAAAGAGAGCTGTAGAAATTGTTTATGC
TGCAACCTTCCCTAAAGCATCAAAACCTTTCATCTATATGTCTATAGTGG
TACCACCTGAGCATGTTGATGTGAATGTGCCACCCACAAA
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