CN189431

Overview
NameCN189431
Unique NameCN189431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length690
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_YERPP (DNA mismatch repair protein mutL OS=Yersinia pestis (strain Pestoides F) GN=mutL PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 55/226 (24.34%), Postives = 107/226 (47.35%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLD-SIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685
            EDL++I SMGFRGEALAS++ V  + +T+ T      ++       M    K  A   G+ + V +LFYN  ARRK ++    ++  I +++ R+A+   +V+ +   +G       +    ++ +  + ++ G +   + + + A ++ D +   +  D   S++           +VN+R++    +  A+   Y      A +P   + + + P  VDVNV P
Sbjct:   84 EDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEAWQAYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGPAFLQHALAI-AWQHGDLNIHGWVADPAASHT----LSEMQYCYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYLDIDPHQVDVNVHP 304          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_YERPN (DNA mismatch repair protein mutL OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=mutL PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 55/226 (24.34%), Postives = 107/226 (47.35%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLD-SIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685
            EDL++I SMGFRGEALAS++ V  + +T+ T      ++       M    K  A   G+ + V +LFYN  ARRK ++    ++  I +++ R+A+   +V+ +   +G       +    ++ +  + ++ G +   + + + A ++ D +   +  D   S++           +VN+R++    +  A+   Y      A +P   + + + P  VDVNV P
Sbjct:   84 EDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEAWQAYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGPAFLQHALAI-AWQHGDLNIHGWVADPAASHT----LSEMQYCYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYLDIDPHQVDVNVHP 304          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_YERPG (DNA mismatch repair protein mutL OS=Yersinia pestis bv. Antiqua (strain Angola) GN=mutL PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 55/226 (24.34%), Postives = 107/226 (47.35%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLD-SIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685
            EDL++I SMGFRGEALAS++ V  + +T+ T      ++       M    K  A   G+ + V +LFYN  ARRK ++    ++  I +++ R+A+   +V+ +   +G       +    ++ +  + ++ G +   + + + A ++ D +   +  D   S++           +VN+R++    +  A+   Y      A +P   + + + P  VDVNV P
Sbjct:   84 EDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEAWQAYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGPAFLQHALAI-AWQHGDLNIHGWVADPAASHT----LSEMQYCYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYLDIDPHQVDVNVHP 304          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_YERPE (DNA mismatch repair protein mutL OS=Yersinia pestis GN=mutL PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 55/226 (24.34%), Postives = 107/226 (47.35%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLD-SIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685
            EDL++I SMGFRGEALAS++ V  + +T+ T      ++       M    K  A   G+ + V +LFYN  ARRK ++    ++  I +++ R+A+   +V+ +   +G       +    ++ +  + ++ G +   + + + A ++ D +   +  D   S++           +VN+R++    +  A+   Y      A +P   + + + P  VDVNV P
Sbjct:   84 EDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEAWQAYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGPAFLQHALAI-AWQHGDLNIHGWVADPAASHT----LSEMQYCYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYLDIDPHQVDVNVHP 304          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_YERPB (DNA mismatch repair protein mutL OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=mutL PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 55/226 (24.34%), Postives = 107/226 (47.35%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLD-SIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685
            EDL++I SMGFRGEALAS++ V  + +T+ T      ++       M    K  A   G+ + V +LFYN  ARRK ++    ++  I +++ R+A+   +V+ +   +G       +    ++ +  + ++ G +   + + + A ++ D +   +  D   S++           +VN+R++    +  A+   Y      A +P   + + + P  VDVNV P
Sbjct:   84 EDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEAWQAYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGPAFLQHALAI-AWQHGDLNIHGWVADPAASHT----LSEMQYCYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYLDIDPHQVDVNVHP 304          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_YERPA (DNA mismatch repair protein mutL OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=mutL PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 55/226 (24.34%), Postives = 107/226 (47.35%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLD-SIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685
            EDL++I SMGFRGEALAS++ V  + +T+ T      ++       M    K  A   G+ + V +LFYN  ARRK ++    ++  I +++ R+A+   +V+ +   +G       +    ++ +  + ++ G +   + + + A ++ D +   +  D   S++           +VN+R++    +  A+   Y      A +P   + + + P  VDVNV P
Sbjct:   84 EDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEAWQAYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGPAFLQHALAI-AWQHGDLNIHGWVADPAASHT----LSEMQYCYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYLDIDPHQVDVNVHP 304          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_YERP3 (DNA mismatch repair protein mutL OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=mutL PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 55/226 (24.34%), Postives = 107/226 (47.35%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLD-SIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685
            EDL++I SMGFRGEALAS++ V  + +T+ T      ++       M    K  A   G+ + V +LFYN  ARRK ++    ++  I +++ R+A+   +V+ +   +G       +    ++ +  + ++ G +   + + + A ++ D +   +  D   S++           +VN+R++    +  A+   Y      A +P   + + + P  VDVNV P
Sbjct:   84 EDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEAWQAYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGPAFLQHALAI-AWQHGDLNIHGWVADPAASHT----LSEMQYCYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYLDIDPHQVDVNVHP 304          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_THEM4 (DNA mismatch repair protein mutL OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=mutL PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 60/227 (26.43%), Postives = 106/227 (46.70%), Query Frame = 2
Query:    8 YEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVA-KKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685
            +ED+ ++ S GFRGEAL+S++ V  + +T  +       R+    G +++  +   + KGT + V +LF+N+ ARRK L++ + +   +V+ + +  + + +V    +  G     V++    +  D  R ++           E  E+ + S    K  G +S+ +Y    +T  + FV  R V    L    E  Y     K   P+  + I VPP  VDVNV P
Sbjct:   84 FEDIYNLYSFGFRGEALSSISKVSKLVIT--SNDGKESNRLEVIGGKIKDIKEYPTSEKGTIVEVYDLFFNVPARRKFLKSDNVEKRYVVEYVEKFLLGNPDVEIVLKSDGEV---VYNAVKGNLEDRFRLIFP----------EVREFTEVSGKYVK--GIISSPSYYRNNRTGQIFFVQKRFVIDKMLYYIFETGYGEALLK--HPYGVLFIEVPPRFVDVNVHP 291          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_NITWN (DNA mismatch repair protein mutL OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=mutL PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 61/230 (26.52%), Postives = 102/230 (44.35%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIA----TSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685
            EDL  I+++GFRGEAL S+  V  + +TT      H + ++  +G  ++E    A   GT++ V +LFY   AR K L+    +   I +++ R+A+   ++ F+    G  RA V   A     + RL  +  + G    +  + + A            ++G+ +  +   A      LFVN R V    +  AV   Y+   P+   P   + +   P  VD NV P
Sbjct:   83 EDLLGIRTLGFRGEALPSIGAVARLCITTREAREPHAWSLTV-EGGRKSEIIPAALTNGTRVEVGDLFYATPARLKFLKTDRTEAEAIREVVRRLAMARPDIGFTLA--GEERAPVTWTAALPGAAGRLTRLGDILGGDFRAAAIPVRAEREG------VIVEGFAAAPSLTRANALGQYLFVNGRPVRDKLILGAVRAAYSDYLPRDRHPVAALFVTADPREVDANVHP 303          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_ELUMP (DNA mismatch repair protein mutL OS=Elusimicrobium minutum (strain Pei191) GN=mutL PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 58/234 (24.79%), Postives = 113/234 (48.29%), Query Frame = 2
Query:    2 RKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSR------LDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685
            + +EDL S+ + GFRGEAL S+  V  +++++  +G   G ++    G + +   +   +KGT + V++LFYN  AR K L++ + + + ++ ++   A+ + +VS++ R  G     V+S   S+       +     + G  +A +L+ +E   +    +F+  +      S   A +     F+N R +    L++AV   Y    PK   P   + + +P    DVN+ P
Sbjct:   82 KNFEDLDSLDTFGFRGEALYSVAAVSKLSISSAEEGG-SGNKIIVEGGKLISVSPS-PNIKGTTVEVKDLFYNTPARLKFLKSDNYERSLLLKVVEESALANLHVSYNVRTDGRL---VYSFLASNGDFKKTVIQRAGQILGAEIAVSLISVEDERFG-FKAFLTPL------SKLTAVRDLQFFFINKRPLTSKTLQQAVYKAYHGR-PKDRHPAFIVFMNMPAADFDVNIHP 302          
The following BLAST results are available for this feature:
BLAST of CN189431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 433
Match NameE-valueIdentityDescription
MUTL_YERPP4.329e-1224.34DNA mismatch repair protein mutL OS=Yersinia pesti... [more]
MUTL_YERPN4.329e-1224.34DNA mismatch repair protein mutL OS=Yersinia pesti... [more]
MUTL_YERPG4.329e-1224.34DNA mismatch repair protein mutL OS=Yersinia pesti... [more]
MUTL_YERPE4.329e-1224.34DNA mismatch repair protein mutL OS=Yersinia pesti... [more]
MUTL_YERPB4.329e-1224.34DNA mismatch repair protein mutL OS=Yersinia pseud... [more]
MUTL_YERPA4.329e-1224.34DNA mismatch repair protein mutL OS=Yersinia pesti... [more]
MUTL_YERP34.329e-1224.34DNA mismatch repair protein mutL OS=Yersinia pseud... [more]
MUTL_THEM44.329e-1226.43DNA mismatch repair protein mutL OS=Thermosipho me... [more]
MUTL_NITWN4.329e-1226.52DNA mismatch repair protein mutL OS=Nitrobacter wi... [more]
MUTL_ELUMP4.329e-1224.79DNA mismatch repair protein mutL OS=Elusimicrobium... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001N13_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001N13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189431 ID=CN189431; Name=CN189431; organism=Citrus sinensis; type=EST; length=690bp
GAGGAAGTATGAGGACTTGCAATCAATCAAATCCATGGGTTTCAGAGGAG
AGGCTTTGGCAAGCATGACTTACGTCGGCCATGTTACCGTCACAACCATC
ACTAAAGGCCACTTGCACGGTTACCGGGTTTCATATAGAGATGGTGTCAT
GGAGAATGAACCAAAAGCATGTGCTGCTGTCAAAGGCACGCAGATAATGG
TGGAGAATTTGTTTTACAACATGATTGCTCGAAGGAAGACACTGCAAAAT
TCTTCTGATGATTATACAAAAATTGTTGATTTGCTAAGCCGGATGGCCAT
TCACCACACAAATGTGAGCTTCTCTTGCAGAAAGCACGGAGCTGCTAGAG
CAGATGTTCACTCTATTGCTACATCGTCAAGGCTTGATTCTATCAGAACT
GTATATGGAGTGTCGGTTGCTAGTAATTTAGTGCAGTTAGAAGCTTCAGA
GTACAATGATTCCTCAAGTTTTGTTTTCAAGATGGATGGCTACGTTTCCA
ATTCAAATTATGTGGCAAAGAAAACAACAATGGTGCTTTTTGTCAATGAT
AGGTTGGTTGAGTGTGCTCCTTTAAAGAGAGCTGTAGAAATTGTTTATGC
TGCAACCTTCCCTAAAGCATCAAAACCTTTCATCTATATGTCTATAGTGG
TACCACCTGAGCATGTTGATGTGAATGTGCCACCCACAAA
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