CN189431

Overview
NameCN189431
Unique NameCN189431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length690
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_METLZ (DNA mismatch repair protein mutL OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=mutL PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.299e-23
Identity = 76/231 (32.90%), Postives = 116/231 (50.22%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHL--HGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSF-VFKMDGYVS--NSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            EDL  I ++GFRGEALAS+  +  VT TT  +G       RV    G + +   A  A +GT ++++ LFYN  ARRK  ++   + + + D++ R+A+ + N+SF    +G  R    +  T S  D I  V+G + +  L  +       S SF   K+DG+++   S     +T   L +N R V    L+ A+   Y    PK   P  ++ IV+ P  VDVNV PT
Sbjct:   87 EDLDGITTLGFRGEALASIAAISKVTFTTKERGSPSPEAARVVIHGGELISH-SAVGAPEGTSVLIDALFYNTPARRKFQKSVPTELSHVYDMVERIALSNRNISFVLLYNGKER--FQTFGTGSYPDVIAAVFGSTFSKELTPV-------SGSFGPVKIDGWITRPGSEMKTTQTRFYLSINGRQVTSRQLQWAIREGYGTLLPKGMYPAAFLDIVLDPRDVDVNVHPT 307          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_CLOPS (DNA mismatch repair protein mutL OS=Clostridium perfringens (strain SM101 / Type A) GN=mutL PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.299e-23
Identity = 74/226 (32.74%), Postives = 120/226 (53.10%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            D+ SI ++GFRGEAL S+  +  V   + T+    G  +    G  E+    C+  +GTQI V NLF+N+ AR+K L+ ++ +   I DL++R+++ + +VSF    +   +  +++      +D IRT+YG S A NL+  E  E+ D++S    + G++ N     A +    LFVN R V+   L  AVE  + +       PF  + I   PE +DVN+ PT
Sbjct:   86 DIFSINTLGFRGEALPSIASIARVDFKSKTEDFDMGKELIISGGEKESLTD-CSMNRGTQIEVRNLFFNVPARKKFLKTTARESALINDLVNRISLANPDVSFKLFNNN--KKILNTYGNGKLIDVIRTIYGKSTAENLIYFE--EHKDTAS----VYGFIGNDTLARASRNNQSLFVNKRYVKNRSLTVAVENAFRSFNVTGKFPFFVLFIDTYPELIDVNIHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STRGC (DNA mismatch repair protein mutL OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=mutL PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.214e-22
Identity = 67/230 (29.13%), Postives = 121/230 (52.61%), Query Frame = 2
Query:    2 RKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            +K  DL  I+++GFRGEA+ S+  V   T+ T T+   HG  +  + G +E      + V GT+I +E+LF+N  AR K +++   + + IVD+++R+++ H  V+F+    G  R    +  + +   +I  +YG++ A  +V++ AS+ +      F++ GYVS      A +  + + +N R ++   L RA+   Y +       P   ++I + P   DVNV PT
Sbjct:   82 KKQADLFRIRTLGFRGEAIPSIASVSRFTIETATENGQHGTLLVAQGGEIEEHEPTSSPV-GTKIKIEDLFFNTPARLKYMKSQQAELSHIVDVINRLSLAHPEVAFTLISDG--REMTRTAGSGNLRQAIAGIYGLATAKKMVEISASDLD------FEVSGYVSLPELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVINIQIDPYLADVNVHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_NEIMA (DNA mismatch repair protein mutL OS=Neisseria meningitidis serogroup A GN=mutL PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.214e-22
Identity = 70/226 (30.97%), Postives = 111/226 (49.12%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKT-TMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            DL+ + SMGFRGE LAS+  V  +T+T+  +   H  +V   DG + + P A A   GT I    LF+N  ARRK L++ + +Y     ++ R+A+ H +++FS ++ G     V  +   S  + I  + G    +  +++      DS S   ++ G ++   +   KT     FVN R V    +  AV+  Y      A  P   + + +PPE VDVNV PT
Sbjct:   86 DLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQVKAEDGKLSS-PTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMIERLALAHPHIAFSLKRDG---KQVFKLPAQSLHERIAAIVGDDFQTASLEI------DSGSGALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPT 301          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STRSV (DNA mismatch repair protein mutL OS=Streptococcus sanguinis (strain SK36) GN=mutL PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.586e-22
Identity = 67/230 (29.13%), Postives = 121/230 (52.61%), Query Frame = 2
Query:    2 RKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            +K  DL  I+++GFRGEA+ S+  V   T+ T T+   HG  +  + G +E      + V GT+I +E+LF+N  AR K +++   + + IVD+++R+++ H  V+F+    G  R    +  + +   +I  +YG++ A  +V++ AS+ +      F++ GYVS      A +  + + +N R ++   L RA+   Y +       P   ++I + P   DVNV PT
Sbjct:   82 KKQADLFRIRTLGFRGEAIPSIASVSRFTIETATEAGRHGTLLVAQGGEIEEHVPTSSPV-GTKIKIEDLFFNTPARLKYMKSQQAELSHIVDVINRLSLAHPEVAFTLISDG--REMTRTAGSGNLRQAIAGIYGLATAKKMVEISASDLD------FEVSGYVSLPELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVINIQIDPYLADVNVHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STAES (DNA mismatch repair protein mutL OS=Staphylococcus epidermidis (strain ATCC 12228) GN=mutL PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.586e-22
Identity = 73/228 (32.02%), Postives = 123/228 (53.95%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQL--EASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            +DL  I+++GFRGEALAS++ V  VT+ T T    +G+ +   +G + ++ K   A KGT I V++LFYN  AR K +++   +  KI D+++RMA+ H  +  S    G      +    ++ +  +  +YG+ VA +LV +  + S+Y+    FV K +   SN +Y++      +F+N R ++   L +A+   Y         P  Y++I + P  VDVNV PT
Sbjct:   85 DDLFHIRTLGFRGEALASISSVAKVTLKTCTDNE-NGHEIYAENGKIIHQ-KPAKAKKGTDIQVDSLFYNTPARLKYIKSLYTELGKITDIVNRMAMSHPEIRISLVSDGKKLLSTNGSGRTNEV--MAEIYGMKVAKDLVHISGDTSDYH-LEGFVAKPEHSRSNKHYIS------IFINGRYIKNFVLNKAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPT 301          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STAEQ (DNA mismatch repair protein mutL OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=mutL PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.586e-22
Identity = 73/228 (32.02%), Postives = 123/228 (53.95%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQL--EASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            +DL  I+++GFRGEALAS++ V  VT+ T T    +G+ +   +G + ++ K   A KGT I V++LFYN  AR K +++   +  KI D+++RMA+ H  +  S    G      +    ++ +  +  +YG+ VA +LV +  + S+Y+    FV K +   SN +Y++      +F+N R ++   L +A+   Y         P  Y++I + P  VDVNV PT
Sbjct:   85 DDLFHIRTLGFRGEALASISSVAKVTLKTCTDNE-NGHEIYAENGKIIHQ-KPAKAKKGTDIQVDSLFYNTPARLKYIKSLYTELGKITDIVNRMAMSHPEIRISLVSDGKKLLSTNGSGRTNEV--MAEIYGMKVAKDLVHISGDTSDYH-LEGFVAKPEHSRSNKHYIS------IFINGRYIKNFVLNKAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPT 301          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_NEIMF (DNA mismatch repair protein mutL OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=mutL PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.586e-22
Identity = 70/226 (30.97%), Postives = 111/226 (49.12%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKT-TMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            DL+ + SMGFRGE LAS+  V  +T+T+  +   H  +V   DG + + P A A   GT I    LF+N  ARRK L++ + +Y     +L R+A+ H +++FS ++ G     V  +   S  + I  + G    +  +++      DS +   ++ G ++   +   KT     FVN R V    +  AV+  Y      A  P   + + +PPE VDVNV PT
Sbjct:   86 DLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQVKAEDGKLSS-PTAAAHPVGTTIEAAELFFNTPARRKFLKSEATEYAHCATMLERLALAHPHIAFSLKRDG---KQVFKLPAQSLHERIAAIVGDDFQTASLEI------DSDNGALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPT 301          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_GEOSW (DNA mismatch repair protein mutL OS=Geobacillus sp. (strain WCH70) GN=mutL PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.586e-22
Identity = 71/225 (31.56%), Postives = 114/225 (50.67%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685
            DL  I+++GFRGEAL S+  V  V + T T G   G +V  + G +    +  +  KGT I V NLF+N  AR K ++    +   + D+++R+A+ H ++SF  R HG  +  +++         +  +YG+ VA  ++ ++A       S  F + GY+S      A +  +   VN R V   PL +A+E  Y    P    P +++SI + P  VDVNV P
Sbjct:   86 DLFRIRTLGFRGEALPSIASVSEVEMKTST-GDGPGTKVVLKGGKLVVHERTTSR-KGTDITVSNLFFNTPARLKYMKTIHTELGHVTDVVNRLAMAHPDISFRLRHHG--KQLLYTSGNGDVRHVLAAIYGMDVAKKMIPIQA------ESLDFTVQGYISLPEVTRASRNYISTIVNGRYVRNIPLAKAIEAGYHTLLPIGRYPIVFLSIAMDPILVDVNVHP 300          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_NEIM0 (DNA mismatch repair protein mutL OS=Neisseria meningitidis serogroup C (strain 053442) GN=mutL PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.071e-22
Identity = 70/226 (30.97%), Postives = 111/226 (49.12%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKT-TMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            DL+ + SMGFRGE LAS+  V  +T+T+  +   H  +V   DG + + P A A   GT I    LF+N  ARRK L++ + +Y     +L R+A+ H +++FS ++ G     V  +   S  + I  + G    +  +++      DS +   ++ G ++   +   KT     FVN R V    +  AV+  Y      A  P   + + +PPE VDVNV PT
Sbjct:   86 DLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQVKAEDGKLSS-PTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAHPHIAFSLKRDG---KPVFKLPAQSLHERIAAIVGDDFQTASLEI------DSGNGALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPT 301          
The following BLAST results are available for this feature:
BLAST of CN189431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 433
Match NameE-valueIdentityDescription
MUTL_METLZ9.299e-2332.90DNA mismatch repair protein mutL OS=Methanocorpusc... [more]
MUTL_CLOPS9.299e-2332.74DNA mismatch repair protein mutL OS=Clostridium pe... [more]
MUTL_STRGC1.214e-2229.13DNA mismatch repair protein mutL OS=Streptococcus ... [more]
MUTL_NEIMA1.214e-2230.97DNA mismatch repair protein mutL OS=Neisseria meni... [more]
MUTL_STRSV1.586e-2229.13DNA mismatch repair protein mutL OS=Streptococcus ... [more]
MUTL_STAES1.586e-2232.02DNA mismatch repair protein mutL OS=Staphylococcus... [more]
MUTL_STAEQ1.586e-2232.02DNA mismatch repair protein mutL OS=Staphylococcus... [more]
MUTL_NEIMF1.586e-2230.97DNA mismatch repair protein mutL OS=Neisseria meni... [more]
MUTL_GEOSW1.586e-2231.56DNA mismatch repair protein mutL OS=Geobacillus sp... [more]
MUTL_NEIM02.071e-2230.97DNA mismatch repair protein mutL OS=Neisseria meni... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001N13_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001N13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189431 ID=CN189431; Name=CN189431; organism=Citrus sinensis; type=EST; length=690bp
GAGGAAGTATGAGGACTTGCAATCAATCAAATCCATGGGTTTCAGAGGAG
AGGCTTTGGCAAGCATGACTTACGTCGGCCATGTTACCGTCACAACCATC
ACTAAAGGCCACTTGCACGGTTACCGGGTTTCATATAGAGATGGTGTCAT
GGAGAATGAACCAAAAGCATGTGCTGCTGTCAAAGGCACGCAGATAATGG
TGGAGAATTTGTTTTACAACATGATTGCTCGAAGGAAGACACTGCAAAAT
TCTTCTGATGATTATACAAAAATTGTTGATTTGCTAAGCCGGATGGCCAT
TCACCACACAAATGTGAGCTTCTCTTGCAGAAAGCACGGAGCTGCTAGAG
CAGATGTTCACTCTATTGCTACATCGTCAAGGCTTGATTCTATCAGAACT
GTATATGGAGTGTCGGTTGCTAGTAATTTAGTGCAGTTAGAAGCTTCAGA
GTACAATGATTCCTCAAGTTTTGTTTTCAAGATGGATGGCTACGTTTCCA
ATTCAAATTATGTGGCAAAGAAAACAACAATGGTGCTTTTTGTCAATGAT
AGGTTGGTTGAGTGTGCTCCTTTAAAGAGAGCTGTAGAAATTGTTTATGC
TGCAACCTTCCCTAAAGCATCAAAACCTTTCATCTATATGTCTATAGTGG
TACCACCTGAGCATGTTGATGTGAATGTGCCACCCACAAA
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