CN189431

Overview
NameCN189431
Unique NameCN189431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length690
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_CAUSK (DNA mismatch repair protein mutL OS=Caulobacter sp. (strain K31) GN=mutL PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 63/228 (27.63%), Postives = 98/228 (42.98%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDG-VMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHG--AARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNY-VAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685
            DL +I +MGFRGEAL S+  V  +++++  KG    + +    G V +  P A A   G +I V +LFY   AR K +++   +   I + + R A+ + +V FS    G    R          RL  +  V G     N +++      D +    ++ G+     Y         LFVN R V    L+ A+   YA    +   P   + I +    VDVNV P
Sbjct:   89 DLLAIHTMGFRGEALPSIGSVARLSISSRAKGSSDAWSILVEGGSVGDVAPAAFAGDHGARIEVRDLFYATPARLKFMKSERAEALAITEEIKRQAMANESVGFSLDIDGRRIIRLPPEHPGPQGRLARLSAVLGRDFQDNAIEI------DQTRDGVRLTGFAGLPTYNRGNAAHQYLFVNGRPVRDRLLQGALRAAYADFLARDRHPTAALYISLDTSEVDVNVHP 310          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_BEII9 (DNA mismatch repair protein mutL OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=mutL PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 64/227 (28.19%), Postives = 95/227 (41.85%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSR--LDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSN-YVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685
            DL +I ++GFRGEAL S+  V  +++T+  +   HG  +S   G  +     C   +GT+I V  LF    AR K L+    +     D + R+A+ H    F+      A  D    A      L  I  V G    +N + +EA            ++G++     + A      LFVN R V    L  AV   Y    P    P + + +   P+ VDVNV P
Sbjct:   84 DLFAIATLGFRGEALPSIGSVSVLSLTSRMETATHGVALSVEHG-RKQTVIPCGQPRGTRIEVRELFRTTPARLKFLKGDRAEARAAADAVQRLAMAHPTRRFTFTSTDTAGFDYLPCAEGPEGLLARIGAVLGKDFEANALPVEAEREG------IILEGFIGLPTWHRANGLAQYLFVNGRPVRDKLLTGAVRAAYMDYLPAGRYPALALFLRCDPQEVDVNVHP 303          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_RICRS (DNA mismatch repair protein mutL OS=Rickettsia rickettsii (strain Sheila Smith) GN=mutL PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.654e-12
Identity = 60/230 (26.09%), Postives = 105/230 (45.65%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAV--KGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADV---HSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNY-VAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685
            D  +I + GFRGEAL S+  +  + +T+  +     +++    G   NE +   +V  +GT+I + +LF+   AR K L+    +    V ++ ++A+ H  +SFS    G     +   +  A ++    I  V G     N      + Y D  +  F + GY S+  Y  A      LF+N+R V+   L+ A+ + Y     +   P   + + + P+ VDVNV P
Sbjct:   84 DFLNINTFGFRGEALPSIAAISKMLITSKKRDADKAFQIKLIGG---NEKQVTISVHNEGTKIEIRDLFFATPARLKFLRADKTELAATVGVVKKIALAHPKISFSLTHDGKNLLKLKGQNKDAETNLKQRIIDVIGDDFIKN------AAYIDFKTPDFSICGYTSSPTYNRASSEDQFLFINNRPVKDKLLQIALRVAYQDYLARDRYPICAIFLQINPQLVDVNVHP 304          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_RICRO (DNA mismatch repair protein mutL OS=Rickettsia rickettsii (strain Iowa) GN=mutL PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.654e-12
Identity = 60/230 (26.09%), Postives = 105/230 (45.65%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAV--KGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADV---HSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNY-VAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685
            D  +I + GFRGEAL S+  +  + +T+  +     +++    G   NE +   +V  +GT+I + +LF+   AR K L+    +    V ++ ++A+ H  +SFS    G     +   +  A ++    I  V G     N      + Y D  +  F + GY S+  Y  A      LF+N+R V+   L+ A+ + Y     +   P   + + + P+ VDVNV P
Sbjct:   84 DFLNINTFGFRGEALPSIAAISKMLITSKKRDADKAFQIKLIGG---NEKQVTISVHNEGTKIEIRDLFFATPARLKFLRADKTELAATVGVVKKIALAHPKISFSLTHDGKNLLKLKGQNKDAETNLKQRIIDVIGDDFIKN------AAYIDFKTPDFSICGYTSSPTYNRASSEDQFLFINNRPVKDKLLQIALRVAYQDYLARDRYPICAIFLQINPQLVDVNVHP 304          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_SYNWW (DNA mismatch repair protein mutL OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=mutL PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.385e-12
Identity = 61/226 (26.99%), Postives = 105/226 (46.46%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNV--SFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685
            DL  I SMGFRGEAL S+  V  + + +  K    G       G +  + +     +G++I+V +LF+N  AR+K L++   +     +L+ + A+   ++  SFS  K    R         S  D++  ++G      L+ ++    + S S +    G V+  N    +   ++FVN R +    L RA++  Y        +P + + I VPP+ +DVNV P
Sbjct:   85 DLLRIMSMGFRGEALPSIASVSRIDIYS-KKEKQEGIHCFIEGGKIL-DLQYFPGPEGSKIIVSDLFFNTPARKKFLRSPVTEGNNAYELVIKYALARPDIAISFSNEKRQLFRTP----GNGSLNDAVIAIFGRDFLEPLIPVKWEGLSLSISGLISPPG-VAKMN----RKRQLIFVNQRPIRSPLLYRALDEGYRGLLLAREQPLVILQIAVPPDSIDVNVHP 299          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_BARQU (DNA mismatch repair protein mutL OS=Bartonella quintana GN=mutL PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.645e-12
Identity = 61/229 (26.64%), Postives = 103/229 (44.98%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSR--LDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTT-MVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            +D+ +I  +GFRGEAL S+  V  + +T+ T+   +   +    G +   PK  AA  GT + V +LF+   AR K ++    +   I D++ R+AI   ++ FS         ++ + A S++  L  I  + G   A N + L A   +       ++ G+    ++    +     +VN R V    L   +   YA    +   P   + I +PP  VDVNV PT
Sbjct:   82 DDVHNIYFLGFRGEALPSIGSVAKLKLTSRTQEAENATEIIVTAGKIIG-PKPAAANPGTIVEVRDLFFVTPARLKFMKTDRAETNAISDMIKRIAIAFPHIRFSLSGLDRTSMELPATANSTQGQLQRITQIMGKEFAPNSIALNAKRES------IRLTGFACLPSFNRSNSLHQFAYVNRRPVRDKFLWGTIRGAYADVMARDRYPVSILFIDLPPADVDVNVHPT 303          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_MYXXD (DNA mismatch repair protein mutL OS=Myxococcus xanthus (strain DK 1622) GN=mutL PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.260e-11
Identity = 60/232 (25.86%), Postives = 98/232 (42.24%), Query Frame = 2
Query:    2 RKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDG---VMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTT-MVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685
            R+ +DL  I SMGFRGEA+ ++  V   T+ +       G RVS   G   ++E+ P       GT + VE+LF+N+ ARRK L+    +     + + R+A+ +  V F     G       +     R + I    G +   +L  +E             + G+ ++  +       +  FVN R +    L   ++  Y        +P + + I V P  VDVNV P
Sbjct:   82 RELDDLFHIDSMGFRGEAIPAIASVSRFTLHSAAANSEVGTRVSVEGGGPPLVEDAPPR----TGTVMTVEDLFFNVPARRKFLRRGDTELKHAEEAVVRLALAYPEVGFFASHEGGTLFSSAACPDDPR-ERIAAALGSTSHPHLFPVEERRLG------VAVTGFAASPEFTFNNARGLYTFVNRRYIRDRGLIGTIQRAYQDFLAAGRQPVVVLHIDVDPRAVDVNVHP 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_BUCAP (DNA mismatch repair protein mutL OS=Buchnera aphidicola subsp. Schizaphis graminum GN=mutL PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.260e-11
Identity = 57/231 (24.68%), Postives = 116/231 (50.22%), Query Frame = 2
Query:    5 KYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEP-KACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIA-TSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAV-EIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            +  DL +I + GFRGEALAS+  V  + + + ++     + + Y +G   +   +  A   GT I+V+NLFYN+  R K ++N   ++ KI + + ++A+ +  ++   +K         +I   ++++  ++TV+     + +++++   +N +   +F    + S+ +   KK     +VN+R V    +K AV    Y     K S  FI + + +P   +D+N+ PT
Sbjct:   83 RLSDLDNINTFGFRGEALASIRAVSRMKLISCSQNSNIAWSI-YSEGFSNHTLLQPIAHPIGTSIIVDNLFYNIPVRLKFIKNERSEFLKIDETIKKIALSNFGINIFFKKDKKLFVSYKAITKNNNKIHRLKTVFNQIDLNYVLEIKEKMHNIT---LFGWLIFPSSLSSTFKK-IQYCYVNNRFVYNNLIKSAVFNSFYEIIGNKRSTSFI-LYLTLPSNEIDINIHPT 307          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_ANAVT (DNA mismatch repair protein mutL OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=mutL PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.260e-11
Identity = 55/246 (22.36%), Postives = 106/246 (43.09%), Query Frame = 2
Query:    2 RKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFV------------------NDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685
            R   DL  I S+GFRGEAL S+T +  V + +    ++ G+RV Y D     + +A A   GT + V NLF +  ARR+ L  ++     +   + ++A+ H   ++   ++      +   AT+ +L          +   L QL   +  +    +   +    ++N  A  TT+ L V                  N R+++   L++ +   +  T P+   P  ++ +++ P+ ++ N  P
Sbjct:   82 RSSADLWKIHSLGFRGEALHSLTTLADVEIISRAPENV-GWRVVYGDNGEATQVEATAIAPGTVVTVSNLFASCAARRQGLPTTAQQMKAVQATIQQIALCHPQTTWQVWQNDRIWFTISPAATAGQL----------IPQFLPQLRPGDLQEIKLEIPNPENPQLSTNNKANATTLSLVVGLPDRCHRHRPDWVRVAINGRMIKSPELEQTILAAFHRTLPRDRYPLCFLHLLISPDQINWNRNP 316          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_PERMH (DNA mismatch repair protein mutL OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=mutL PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.645e-11
Identity = 57/225 (25.33%), Postives = 111/225 (49.33%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685
            +DL SI S GFRGEAL S++ V   ++ +  +    G  +    GV  +  +  A V GT++ V+++F+N   R+K L++   ++   +      A+ +T++ F    +G    ++ ++  S     I  +Y   ++  L++L   +Y D +  ++   GY+S      K+   +++VN R V+   L++ ++ +        S+ F  + I +PP  VD NV P
Sbjct:   85 DDLYSISSYGFRGEALYSISSVSKFSIVSRPEDLSVGKELYIEGGVFRSFTETGAPV-GTKVRVKDIFFNTPVRKKFLKSERTEFVHCLKTFINYAVVNTDIHFRLYHNG---RELMNLPPSDLKKRITYIY-PELSGRLLEL---DYTDETGRIY---GYISTDERFKKEG--IVYVNKRPVKNRELRKIIKSL-------ISEKFYVLFIELPPYFVDHNVHP 289          
The following BLAST results are available for this feature:
BLAST of CN189431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 433
Match NameE-valueIdentityDescription
MUTL_CAUSK4.329e-1227.63DNA mismatch repair protein mutL OS=Caulobacter sp... [more]
MUTL_BEII94.329e-1228.19DNA mismatch repair protein mutL OS=Beijerinckia i... [more]
MUTL_RICRS5.654e-1226.09DNA mismatch repair protein mutL OS=Rickettsia ric... [more]
MUTL_RICRO5.654e-1226.09DNA mismatch repair protein mutL OS=Rickettsia ric... [more]
MUTL_SYNWW7.385e-1226.99DNA mismatch repair protein mutL OS=Syntrophomonas... [more]
MUTL_BARQU9.645e-1226.64DNA mismatch repair protein mutL OS=Bartonella qui... [more]
MUTL_MYXXD1.260e-1125.86DNA mismatch repair protein mutL OS=Myxococcus xan... [more]
MUTL_BUCAP1.260e-1124.68DNA mismatch repair protein mutL OS=Buchnera aphid... [more]
MUTL_ANAVT1.260e-1122.36DNA mismatch repair protein mutL OS=Anabaena varia... [more]
MUTL_PERMH1.645e-1125.33DNA mismatch repair protein mutL OS=Persephonella ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001N13_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001N13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189431 ID=CN189431; Name=CN189431; organism=Citrus sinensis; type=EST; length=690bp
GAGGAAGTATGAGGACTTGCAATCAATCAAATCCATGGGTTTCAGAGGAG
AGGCTTTGGCAAGCATGACTTACGTCGGCCATGTTACCGTCACAACCATC
ACTAAAGGCCACTTGCACGGTTACCGGGTTTCATATAGAGATGGTGTCAT
GGAGAATGAACCAAAAGCATGTGCTGCTGTCAAAGGCACGCAGATAATGG
TGGAGAATTTGTTTTACAACATGATTGCTCGAAGGAAGACACTGCAAAAT
TCTTCTGATGATTATACAAAAATTGTTGATTTGCTAAGCCGGATGGCCAT
TCACCACACAAATGTGAGCTTCTCTTGCAGAAAGCACGGAGCTGCTAGAG
CAGATGTTCACTCTATTGCTACATCGTCAAGGCTTGATTCTATCAGAACT
GTATATGGAGTGTCGGTTGCTAGTAATTTAGTGCAGTTAGAAGCTTCAGA
GTACAATGATTCCTCAAGTTTTGTTTTCAAGATGGATGGCTACGTTTCCA
ATTCAAATTATGTGGCAAAGAAAACAACAATGGTGCTTTTTGTCAATGAT
AGGTTGGTTGAGTGTGCTCCTTTAAAGAGAGCTGTAGAAATTGTTTATGC
TGCAACCTTCCCTAAAGCATCAAAACCTTTCATCTATATGTCTATAGTGG
TACCACCTGAGCATGTTGATGTGAATGTGCCACCCACAAA
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