CN189431
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_MESSB (DNA mismatch repair protein mutL OS=Mesorhizobium sp. (strain BNC1) GN=mutL PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.252e-11 Identity = 58/227 (25.55%), Postives = 101/227 (44.49%), Query Frame = 2 Query: 14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIAT--SSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685 D+ I+++GFRGEAL S+ VG +T+ + T G ++ DG + K AA +GT + V +LF+ AR K +++ + I +++ R+A+ V F ++ +++ L + + G A N + ++A VF + GY S ++ +VN R V + A+ Y P+ + I + P VDVNV P Sbjct: 83 DIHDIRTLGFRGEALPSIGSVGRLTLRSRTPDADGGAEITV-DGGKASAVKPVAANRGTTVEVRDLFFATPARLKFMKSERAEAAAITEVVKRIALAFPAVRFMLSGTDRTSTELPAVSADGDGLLRRLGQIIGKDFAENALPIDAEREG-----VF-LTGYASIPSFTRGNALAQFAYVNGRPVRDKLIAGAIRGAYMDALPRDRHAVTALFISLDPALVDVNVHP 302
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_RICTY (DNA mismatch repair protein mutL OS=Rickettsia typhi GN=mutL PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.165e-11 Identity = 51/233 (21.89%), Postives = 108/233 (46.35%), Query Frame = 2 Query: 14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAV--KGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFV------FKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685 D +I + GFRGEAL S+ + + +T+ + +++ G N+ + +V +GT+I + +LF+ AR K L++ + +D++ ++A+ H +SF+ +H+ +L + ++ ++ + + ++S++ F + GY S Y A LF+N+R ++ L+ A+ + Y + + + + P+ VDVNV P Sbjct: 84 DFLNIHTFGFRGEALPSIAAISKMLITSKKREADKAFQIKLIGG---NKQQITVSVHNEGTKIEIRDLFFATPARLKFLKSDRTELAASLDIVKKIALAHPKISFNL---------IHNSKNLLKLKGQNKDFETNLKQRIIDVIGDVFIKNASYINFKTPDFSICGYTSIPTYSRASSEDQFLFINNRPIKDKLLQVALRVAYQDYLARDRYALCAIFLQIDPQLVDVNVHP 304
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_CHLPN (DNA mismatch repair protein mutL OS=Chlamydia pneumoniae GN=mutL PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.165e-11 Identity = 54/228 (23.68%), Postives = 98/228 (42.98%), Query Frame = 2 Query: 2 RKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685 R++ D+ S+ S GFRGEAL S+ + + + + +G V + ++ EP CA GT ++V +LFYN+ RR ++ D I L+ + N+ +S G H ++ + + + +Q +A + ++ V + S S + + +F+NDR +E + + V YA P P + + +P D NV P Sbjct: 85 REFSDIFSLNSFGFRGEALPSIASISKMEIQSSIEGDEGVRTVIHGGDIVSCEP--CARQLGTTVIVNSLFYNVPVRRGFQKSMQSDRLGIRKLIENRILSTANIGWSWISEG------HHEIQIAKQQGFQERVAYVMGDHFMQ-DALTIDKEANGVRIVGVLGSPSFHRPTRQGQKIFINDRPIESLFISKKVGDAYALLLPLHRYPVFVLKLYLPSSWCDFNVHP 303 The following BLAST results are available for this feature:
BLAST of CN189431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 433
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189431 ID=CN189431; Name=CN189431; organism=Citrus sinensis; type=EST; length=690bpback to top |