CN189431

Overview
NameCN189431
Unique NameCN189431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length690
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_CLONN (DNA mismatch repair protein mutL OS=Clostridium novyi (strain NT) GN=mutL PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.071e-22
Identity = 71/227 (31.28%), Postives = 122/227 (53.74%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            EDL SI + GFRGEAL S+  V +V + + T     G  +    G + N  K  A   GT I VENLF+N+ AR K L++   + + I ++++R+A+ + N+SF  + +   +  + + A+S   ++IR++YG ++  N++  E  E++D    +  + GY+ NS      +    +FVN R ++   +  AVE  + +       PF  + + + PE +DVNV PT
Sbjct:   85 EDLYSINTFGFRGEALPSIAAVSNVLLKSKTMDSDFGKEILVSGGRI-NHIKDTACNIGTVISVENLFFNVPAREKFLKSDRRESSLISNIINRLALANHNISF--KYYTNNKKTLMTYASSDVKNTIRSIYGKNIYENIISFE--EHSD----IVSVYGYIGNSEISRGSRNNQSIFVNKRYIKSGTITAAVENAFKSFSTVNKFPFFVLFVDIYPEFIDVNVHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_NEIMB (DNA mismatch repair protein mutL OS=Neisseria meningitidis serogroup B GN=mutL PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.705e-22
Identity = 72/226 (31.86%), Postives = 109/226 (48.23%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKT-TMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            DL+ + SMGFRGE LAS+  V  +T+T+      H  +V   DG + + P A A   GT I    LF+N  ARRK L++ + +Y     +L R+A+ H +++FS ++ G     V  +   S  + I  + G    +      AS   DS +   ++ G ++   +   KT     FVN R V    +  AV+  Y      A  P   + + +PPE VDVNV PT
Sbjct:   86 DLEHVASMGFRGEGLASIASVSRLTLTSRQNDSSHATQVKAEDGKLSS-PTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAHPHIAFSLKRDG---KQVFKLPAQSLHERIAAIVGEDFQT------ASLGIDSGNGALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPT 301          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_NEIG2 (DNA mismatch repair protein mutL OS=Neisseria gonorrhoeae (strain NCCP11945) GN=mutL PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.705e-22
Identity = 69/226 (30.53%), Postives = 111/226 (49.12%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKT-TMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            DL+ + SMGFRGE LAS+  V  +T+T+  +   H  +V   DG + + P A A   GT I    LF+N  ARRK L++ + +Y     +L R+A+ H +++FS ++ G     V  +   S  + I  + G    +  +++      DS +   ++ G ++   +   KT     FVN R V    +  AV+  Y      A  P   + + +PP+ VDVNV PT
Sbjct:   86 DLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQVKAEDGKLSS-PTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAHPHIAFSLKRDG---KQVFKLPAQSLHERIAAIVGDDFQTASLEI------DSGNSALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLELPPKAVDVNVHPT 301          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_CLOPE (DNA mismatch repair protein mutL OS=Clostridium perfringens GN=mutL PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.533e-22
Identity = 73/226 (32.30%), Postives = 120/226 (53.10%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            D+ SI ++GFRGEAL S+  +  V   + T+    G  +    G  E+    C+  +GTQI V +LF+N+ AR+K L+ ++ +   I DL++R+++ + +VSF    +   +  +++      +D IRT+YG S A NL+  E  E+ D++S    + G++ N     A +    LFVN R V+   L  AVE  + +       PF  + I   PE +DVN+ PT
Sbjct:   86 DIFSINTLGFRGEALPSIASIARVDFKSKTEDFDMGKELIISGGEKESLTD-CSMNRGTQIEVRDLFFNVPARKKFLKTTARESALINDLVNRISLANPDVSFKLFNNN--KKILNTYGNGKLIDVIRTIYGKSTAENLIYFE--EHKDTAS----VYGFIGNDTLARASRNNQSLFVNKRYVKNRSLTVAVENAFRSFNVTGKFPFFVLFIDTYPELIDVNIHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_BACSU (DNA mismatch repair protein mutL OS=Bacillus subtilis GN=mutL PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.533e-22
Identity = 71/226 (31.42%), Postives = 116/226 (51.33%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            DL  ++++GFRGEAL S+  V H+ +TT T G   G ++  + G + +E ++ +  KGT+I+V NLF+N  AR K ++    +   I D+++R+A+ H  VS   R HG      +       +  +  +YG +VA  ++ L        SS  F++ GY++      A +  M   VN R ++  PL +AV   Y    P    P  ++ I + P  VDVNV P+
Sbjct:   86 DLFRVRTLGFRGEALPSIASVSHLEITTST-GEGAGTKLVLQGGNIISESRSSSR-KGTEIVVSNLFFNTPARLKYMKTVHTELGNITDVVNRIALAHPEVSIRLRHHGKNLLQTNGNGDVRHV--LAAIYGTAVAKKMLPLHV------SSLDFEVKGYIALPEITRASRNYMSSVVNGRYIKNFPLVKAVHEGYHTLLPIGRHPITFIEITMDPILVDVNVHPS 301          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_PELTS (DNA mismatch repair protein mutL OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=mutL PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.615e-22
Identity = 68/227 (29.96%), Postives = 114/227 (50.22%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDG-VMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685
            +DL  I ++GFRGEAL S+  V  +TV T T+  L G R  +  G ++   P  C    GT I V +LFYN  ARRK ++  S +      L+SR+A+    + F     G  R   +S  + + +DS+  VYG  +A+ ++ ++A            ++GY+   +   + ++ + + +N R V C  +  A+E  Y     +  +P   +S+ V PE +DVN+ P
Sbjct:   85 DDLNRITTLGFRGEALPSIAAVSKITVATRTRDALAGTRAEFAGGELIGKGPIGCP--PGTSITVRDLFYNTPARRKAMKAPSAEGALCGGLISRLALARPEICFEVGIKG--RRVFYSPGSGNLIDSLAAVYGRQIAAEMIAVKAVAEG------LSINGYLGKPSLSRSTRSHITVIINGRYVRCPAIAEAIEGAYGTLLSRGRRPVAVLSLSVSPELLDVNIHP 301          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STRPZ (DNA mismatch repair protein mutL OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=mutL PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.027e-22
Identity = 69/230 (30.00%), Postives = 116/230 (50.43%), Query Frame = 2
Query:    2 RKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            +   DL  I+++GFRGEAL S+  +  +T+ T TK   HG  +    G +E   +A +   GT+I VENLFYN  AR K +++   +   IVD+++R+++ H  V+F+    G  R    +  T     +I  +YG++    ++ +  ++ +      F++ GYVS      A +  M + VN R ++   L RA+   Y +       P + + I + P   DVNV PT
Sbjct:   82 KSQSDLFRIRTLGFRGEALPSVASISKITIKTATKEVTHGSLLIATGGEIETL-EAISTPTGTKIKVENLFYNTPARLKYMKSLQAELAHIVDVVNRLSLAHPEVAFTLISDG--RQLTQTSGTGDLRQAIAGIYGLNTTKKMLAISNADLD------FEVSGYVSLPELTRANRNYMTILVNGRYIKNFLLNRAILDGYGSKLMVGRFPIVVIDIQIDPYLADVNVHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STRPG (DNA mismatch repair protein mutL OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=mutL PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.027e-22
Identity = 69/230 (30.00%), Postives = 116/230 (50.43%), Query Frame = 2
Query:    2 RKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            +   DL  I+++GFRGEAL S+  +  +T+ T TK   HG  +    G +E   +A +   GT+I VENLFYN  AR K +++   +   IVD+++R+++ H  V+F+    G  R    +  T     +I  +YG++    ++ +  ++ +      F++ GYVS      A +  M + VN R ++   L RA+   Y +       P + + I + P   DVNV PT
Sbjct:   82 KSQSDLFRIRTLGFRGEALPSVASISKITIKTATKEVTHGSLLIATGGEIETL-EAISTPTGTKIKVENLFYNTPARLKYMKSLQAELAHIVDVVNRLSLAHPEVAFTLISDG--RQLTQTSGTGDLRQAIAGIYGLNTTKKMLAISNADLD------FEVSGYVSLPELTRANRNYMTILVNGRYIKNFLLNRAILDGYGSKLMVGRFPIVVIDIQIDPYLADVNVHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STRP6 (DNA mismatch repair protein mutL OS=Streptococcus pyogenes serotype M6 GN=mutL PE=3 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 6.027e-22
Identity = 69/230 (30.00%), Postives = 116/230 (50.43%), Query Frame = 2
Query:    2 RKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            +   DL  I+++GFRGEAL S+  +  +T+ T TK   HG  +    G +E   +A +   GT+I VENLFYN  AR K +++   +   IVD+++R+++ H  V+F+    G  R    +  T     +I  +YG++    ++ +  ++ +      F++ GYVS      A +  M + VN R ++   L RA+   Y +       P + + I + P   DVNV PT
Sbjct:   82 KSQSDLFRIRTLGFRGEALPSVASISKITIKTATKEVTHGSLLIATGGEIETL-EAISTPTGTKIKVENLFYNTPARLKYMKSLQAELAHIVDVVNRLSLAHPEVAFTLISDG--RQLTQTSGTGDLRQAIAGIYGLNTTKKMLAISNADLD------FEVSGYVSLPELTRANRNYMTILVNGRYIKNFLLNRAILDGYGSKLMVGRFPIVVIDIQIDPYLADVNVHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STRP3 (DNA mismatch repair protein mutL OS=Streptococcus pyogenes serotype M3 GN=mutL PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.027e-22
Identity = 69/230 (30.00%), Postives = 116/230 (50.43%), Query Frame = 2
Query:    2 RKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            +   DL  I+++GFRGEAL S+  +  +T+ T TK   HG  +    G +E   +A +   GT+I VENLFYN  AR K +++   +   IVD+++R+++ H  V+F+    G  R    +  T     +I  +YG++    ++ +  ++ +      F++ GYVS      A +  M + VN R ++   L RA+   Y +       P + + I + P   DVNV PT
Sbjct:   82 KSQSDLFRIRTLGFRGEALPSVASISKITIKTATKEVTHGSLLIATGGEIETL-EAISTPTGTKIKVENLFYNTPARLKYMKSLQAELAHIVDVVNRLSLAHPEVAFTLISDG--RQLTQTSGTGDLRQAIAGIYGLNTTKKMLAISNADLD------FEVSGYVSLPELTRANRNYMTILVNGRYIKNFLLNRAILDGYGSKLMVGRFPIVVIDIQIDPYLADVNVHPT 302          
The following BLAST results are available for this feature:
BLAST of CN189431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 433
Match NameE-valueIdentityDescription
MUTL_CLONN2.071e-2231.28DNA mismatch repair protein mutL OS=Clostridium no... [more]
MUTL_NEIMB2.705e-2231.86DNA mismatch repair protein mutL OS=Neisseria meni... [more]
MUTL_NEIG22.705e-2230.53DNA mismatch repair protein mutL OS=Neisseria gono... [more]
MUTL_CLOPE3.533e-2232.30DNA mismatch repair protein mutL OS=Clostridium pe... [more]
MUTL_BACSU3.533e-2231.42DNA mismatch repair protein mutL OS=Bacillus subti... [more]
MUTL_PELTS4.615e-2229.96DNA mismatch repair protein mutL OS=Pelotomaculum ... [more]
MUTL_STRPZ6.027e-2230.00DNA mismatch repair protein mutL OS=Streptococcus ... [more]
MUTL_STRPG6.027e-2230.00DNA mismatch repair protein mutL OS=Streptococcus ... [more]
MUTL_STRP66.027e-2230.00DNA mismatch repair protein mutL OS=Streptococcus ... [more]
MUTL_STRP36.027e-2230.00DNA mismatch repair protein mutL OS=Streptococcus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001N13_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001N13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189431 ID=CN189431; Name=CN189431; organism=Citrus sinensis; type=EST; length=690bp
GAGGAAGTATGAGGACTTGCAATCAATCAAATCCATGGGTTTCAGAGGAG
AGGCTTTGGCAAGCATGACTTACGTCGGCCATGTTACCGTCACAACCATC
ACTAAAGGCCACTTGCACGGTTACCGGGTTTCATATAGAGATGGTGTCAT
GGAGAATGAACCAAAAGCATGTGCTGCTGTCAAAGGCACGCAGATAATGG
TGGAGAATTTGTTTTACAACATGATTGCTCGAAGGAAGACACTGCAAAAT
TCTTCTGATGATTATACAAAAATTGTTGATTTGCTAAGCCGGATGGCCAT
TCACCACACAAATGTGAGCTTCTCTTGCAGAAAGCACGGAGCTGCTAGAG
CAGATGTTCACTCTATTGCTACATCGTCAAGGCTTGATTCTATCAGAACT
GTATATGGAGTGTCGGTTGCTAGTAATTTAGTGCAGTTAGAAGCTTCAGA
GTACAATGATTCCTCAAGTTTTGTTTTCAAGATGGATGGCTACGTTTCCA
ATTCAAATTATGTGGCAAAGAAAACAACAATGGTGCTTTTTGTCAATGAT
AGGTTGGTTGAGTGTGCTCCTTTAAAGAGAGCTGTAGAAATTGTTTATGC
TGCAACCTTCCCTAAAGCATCAAAACCTTTCATCTATATGTCTATAGTGG
TACCACCTGAGCATGTTGATGTGAATGTGCCACCCACAAA
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