CN189431

Overview
NameCN189431
Unique NameCN189431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length690
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STRP1 (DNA mismatch repair protein mutL OS=Streptococcus pyogenes serotype M1 GN=mutL PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.027e-22
Identity = 69/230 (30.00%), Postives = 116/230 (50.43%), Query Frame = 2
Query:    2 RKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            +   DL  I+++GFRGEAL S+  +  +T+ T TK   HG  +    G +E   +A +   GT+I VENLFYN  AR K +++   +   IVD+++R+++ H  V+F+    G  R    +  T     +I  +YG++    ++ +  ++ +      F++ GYVS      A +  M + VN R ++   L RA+   Y +       P + + I + P   DVNV PT
Sbjct:   82 KSQSDLFRIRTLGFRGEALPSVASISKITIKTATKEVTHGSLLIATGGEIETL-EAISTPTGTKIKVENLFYNTPARLKYMKSLQAELAHIVDVVNRLSLAHPEVAFTLISDG--RQLTQTSGTGDLRQAIAGIYGLNTTKKMLAISNADLD------FEVSGYVSLPELTRANRNYMTILVNGRYIKNFLLNRAILDGYGSKLMVGRFPIVVIDIQIDPYLADVNVHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_GRAFK (DNA mismatch repair protein mutL OS=Gramella forsetii (strain KT0803) GN=mutL PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.027e-22
Identity = 68/227 (29.96%), Postives = 113/227 (49.78%), Query Frame = 2
Query:   11 EDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAK-KTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            +DL S+K+ GFRGEALAS+  + HV + T T+    G  +      + ++  A    KGT I V+NLFYN+ ARR  L++ + +   I+D   R+A+ H N+SFS   +G    ++  +  ++    I  + G      LV +E        + + K+ G+V    +  K +     FVNDR ++   L  AV   +       S P  ++ + V P+ +D+N+ PT
Sbjct:   86 DDLFSLKTKGFRGEALASIAAIAHVELRTKTENDEVGTCLKVEGSEVVSQD-AFVTPKGTSISVKNLFYNIPARRNFLKSDNVETRHIIDEFQRVALAHPNISFSLLHNG---NELFQLPITNFRQRITNILGGKTNEKLVPVE------EDTEIAKISGFVGKPEFAKKSRGEQFFFVNDRFIKSPYLNHAVTASFEGLLKDKSYPSYFLYLEVDPKSIDINIHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STRZT (DNA mismatch repair protein mutL OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=mutL PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.872e-22
Identity = 69/226 (30.53%), Postives = 119/226 (52.65%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYN-DSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            DL  I+++GFRGEAL S+  V  +T+ T   G  HG ++  R G +E    A + V GT++ VE+LF+N  AR K +++   + + I+D+++R+ + H  +SFS    G  +    +  T     +I  +YG+  A  ++++E S+ + + S FV   +   +N NY++      LF+N R ++   L RA+   + +       P   + I + P   DVNV PT
Sbjct:   86 DLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTKLVARGGEVEEVIPATSPV-GTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHPEISFSLISDG--KEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFEISGFVSLPELTRANRNYIS------LFINGRYIKNFLLNRAILDGFGSKLMVGRFPLAVIHIHIDPYLADVNVHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STRZP (DNA mismatch repair protein mutL OS=Streptococcus pneumoniae (strain P1031) GN=mutL PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.872e-22
Identity = 69/226 (30.53%), Postives = 119/226 (52.65%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYN-DSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            DL  I+++GFRGEAL S+  V  +T+ T   G  HG ++  R G +E    A + V GT++ VE+LF+N  AR K +++   + + I+D+++R+ + H  +SFS    G  +    +  T     +I  +YG+  A  ++++E S+ + + S FV   +   +N NY++      LF+N R ++   L RA+   + +       P   + I + P   DVNV PT
Sbjct:   86 DLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTKLVARGGEVEEVIPATSPV-GTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHPEISFSLISDG--KEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFEISGFVSLPELTRANRNYIS------LFINGRYIKNFLLNRAILDGFGSKLMVGRFPLAVIHIHIDPYLADVNVHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STRZJ (DNA mismatch repair protein mutL OS=Streptococcus pneumoniae (strain JJA) GN=mutL PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.872e-22
Identity = 69/226 (30.53%), Postives = 119/226 (52.65%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYN-DSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            DL  I+++GFRGEAL S+  V  +T+ T   G  HG ++  R G +E    A + V GT++ VE+LF+N  AR K +++   + + I+D+++R+ + H  +SFS    G  +    +  T     +I  +YG+  A  ++++E S+ + + S FV   +   +N NY++      LF+N R ++   L RA+   + +       P   + I + P   DVNV PT
Sbjct:   86 DLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTKLVARGGEVEEVIPATSPV-GTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHPEISFSLISDG--KEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFEISGFVSLPELTRANRNYIS------LFINGRYIKNFLLNRAILDGFGSKLMVGRFPLAVIHIHIDPYLADVNVHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STRPS (DNA mismatch repair protein mutL OS=Streptococcus pneumoniae (strain CGSP14) GN=mutL PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.872e-22
Identity = 69/226 (30.53%), Postives = 119/226 (52.65%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYN-DSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            DL  I+++GFRGEAL S+  V  +T+ T   G  HG ++  R G +E    A + V GT++ VE+LF+N  AR K +++   + + I+D+++R+ + H  +SFS    G  +    +  T     +I  +YG+  A  ++++E S+ + + S FV   +   +N NY++      LF+N R ++   L RA+   + +       P   + I + P   DVNV PT
Sbjct:   86 DLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTKLVARGGEVEEVIPATSPV-GTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHPEISFSLISDG--KEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFEISGFVSLPELTRANRNYIS------LFINGRYIKNFLLNRAILDGFGSKLMVGRFPLAVIHIHIDPYLADVNVHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STRPJ (DNA mismatch repair protein mutL OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=mutL PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.872e-22
Identity = 69/226 (30.53%), Postives = 119/226 (52.65%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYN-DSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            DL  I+++GFRGEAL S+  V  +T+ T   G  HG ++  R G +E    A + V GT++ VE+LF+N  AR K +++   + + I+D+++R+ + H  +SFS    G  +    +  T     +I  +YG+  A  ++++E S+ + + S FV   +   +N NY++      LF+N R ++   L RA+   + +       P   + I + P   DVNV PT
Sbjct:   86 DLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTKLVARGGEVEEVIPATSPV-GTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHPEISFSLISDG--KEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFEISGFVSLPELTRANRNYIS------LFINGRYIKNFLLNRAILDGFGSKLMVGRFPLAVIHIHIDPYLADVNVHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STRPI (DNA mismatch repair protein mutL OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=mutL PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.872e-22
Identity = 69/226 (30.53%), Postives = 119/226 (52.65%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYN-DSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            DL  I+++GFRGEAL S+  V  +T+ T   G  HG ++  R G +E    A + V GT++ VE+LF+N  AR K +++   + + I+D+++R+ + H  +SFS    G  +    +  T     +I  +YG+  A  ++++E S+ + + S FV   +   +N NY++      LF+N R ++   L RA+   + +       P   + I + P   DVNV PT
Sbjct:   86 DLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTKLVARGGEVEEVIPATSPV-GTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHPEISFSLISDG--KEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFEISGFVSLPELTRANRNYIS------LFINGRYIKNFLLNRAILDGFGSKLMVGRFPLAVIHIHIDPYLADVNVHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STRPC (DNA mismatch repair protein mutL OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=mutL PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.872e-22
Identity = 69/230 (30.00%), Postives = 116/230 (50.43%), Query Frame = 2
Query:    2 RKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            +   DL  I+++GFRGEAL S+  +  +T+ T TK   HG  +    G +E   +A +   GT+I VENLFYN  AR K +++   +   IVD+++R+++ H  V+F+    G  R    +  T     +I  +YG++    ++ +  ++ +      F++ GYVS      A +  M + VN R ++   L RA+   Y +       P + + I + P   DVNV PT
Sbjct:   82 KSQSDLFRIRTLGFRGEALPSVASISKITIKTATKEVTHGSLLIATGGEIETL-EAISTPTGTKIKVENLFYNTPARLKYMKSLQAELAHIVDVVNRLSLAHPEVAFTLISDG--RQLTQTSGTGDLRQAIAGIYGLNTTKKMLVISNADLD------FEVSGYVSLPELTRANRNYMTILVNGRYIKNFLLNRAILDGYGSKLMVGRFPIVVIDIQIDPYLADVNVHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STRPB (DNA mismatch repair protein mutL OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=mutL PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.872e-22
Identity = 69/230 (30.00%), Postives = 116/230 (50.43%), Query Frame = 2
Query:    2 RKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            +   DL  I+++GFRGEAL S+  +  +T+ T TK   HG  +    G +E   +A +   GT+I VENLFYN  AR K +++   +   IVD+++R+++ H  V+F+    G  R    +  T     +I  +YG++    ++ +  ++ +      F++ GYVS      A +  M + VN R ++   L RA+   Y +       P + + I + P   DVNV PT
Sbjct:   82 KSQSDLFRIRTLGFRGEALPSVASISKITIKTATKEVTHGSLLIATGGEIETL-EAISTPTGTKIKVENLFYNTPARLKYMKSLQAELAHIVDVVNRLSLAHPEVAFTLISDG--RQLTQTSGTGDLRQAIAGIYGLNTTKKMLVISNADLD------FEVSGYVSLPELTRANRNYMTILVNGRYIKNFLLNRAILDGYGSKLMVGRFPIVVIDIQIDPYLADVNVHPT 302          
The following BLAST results are available for this feature:
BLAST of CN189431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 433
Match NameE-valueIdentityDescription
MUTL_STRP16.027e-2230.00DNA mismatch repair protein mutL OS=Streptococcus ... [more]
MUTL_GRAFK6.027e-2229.96DNA mismatch repair protein mutL OS=Gramella forse... [more]
MUTL_STRZT7.872e-2230.53DNA mismatch repair protein mutL OS=Streptococcus ... [more]
MUTL_STRZP7.872e-2230.53DNA mismatch repair protein mutL OS=Streptococcus ... [more]
MUTL_STRZJ7.872e-2230.53DNA mismatch repair protein mutL OS=Streptococcus ... [more]
MUTL_STRPS7.872e-2230.53DNA mismatch repair protein mutL OS=Streptococcus ... [more]
MUTL_STRPJ7.872e-2230.53DNA mismatch repair protein mutL OS=Streptococcus ... [more]
MUTL_STRPI7.872e-2230.53DNA mismatch repair protein mutL OS=Streptococcus ... [more]
MUTL_STRPC7.872e-2230.00DNA mismatch repair protein mutL OS=Streptococcus ... [more]
MUTL_STRPB7.872e-2230.00DNA mismatch repair protein mutL OS=Streptococcus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001N13_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001N13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189431 ID=CN189431; Name=CN189431; organism=Citrus sinensis; type=EST; length=690bp
GAGGAAGTATGAGGACTTGCAATCAATCAAATCCATGGGTTTCAGAGGAG
AGGCTTTGGCAAGCATGACTTACGTCGGCCATGTTACCGTCACAACCATC
ACTAAAGGCCACTTGCACGGTTACCGGGTTTCATATAGAGATGGTGTCAT
GGAGAATGAACCAAAAGCATGTGCTGCTGTCAAAGGCACGCAGATAATGG
TGGAGAATTTGTTTTACAACATGATTGCTCGAAGGAAGACACTGCAAAAT
TCTTCTGATGATTATACAAAAATTGTTGATTTGCTAAGCCGGATGGCCAT
TCACCACACAAATGTGAGCTTCTCTTGCAGAAAGCACGGAGCTGCTAGAG
CAGATGTTCACTCTATTGCTACATCGTCAAGGCTTGATTCTATCAGAACT
GTATATGGAGTGTCGGTTGCTAGTAATTTAGTGCAGTTAGAAGCTTCAGA
GTACAATGATTCCTCAAGTTTTGTTTTCAAGATGGATGGCTACGTTTCCA
ATTCAAATTATGTGGCAAAGAAAACAACAATGGTGCTTTTTGTCAATGAT
AGGTTGGTTGAGTGTGCTCCTTTAAAGAGAGCTGTAGAAATTGTTTATGC
TGCAACCTTCCCTAAAGCATCAAAACCTTTCATCTATATGTCTATAGTGG
TACCACCTGAGCATGTTGATGTGAATGTGCCACCCACAAA
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