CN189431

Overview
NameCN189431
Unique NameCN189431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length690
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STRP8 (DNA mismatch repair protein mutL OS=Streptococcus pyogenes serotype M18 GN=mutL PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.872e-22
Identity = 69/230 (30.00%), Postives = 116/230 (50.43%), Query Frame = 2
Query:    2 RKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            +   DL  I+++GFRGEAL S+  +  +T+ T TK   HG  +    G +E   +A +   GT+I VENLFYN  AR K +++   +   IVD+++R+++ H  V+F+    G  R    +  T     +I  +YG++    ++ +  ++ +      F++ GYVS      A +  M + VN R ++   L RA+   Y +       P + + I + P   DVNV PT
Sbjct:   82 KSQSDLFRIRTLGFRGEALPSVASISKITIKTATKEVTHGSLLIATGGEIETL-EAISTPTGTKIKVENLFYNTPARLKYMKSLQAELAHIVDVVNRLSLAHPEVAFTLISDG--RQLTQTSGTGDLRQAIAGIYGLNTTKKMLVISNADLD------FEVSGYVSLPELTRANRNYMTILVNGRYIKNFLLNRAILDGYGSKLMVGRFPIVVIDIQIDPYLADVNVHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STRP4 (DNA mismatch repair protein mutL OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=mutL PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.872e-22
Identity = 69/226 (30.53%), Postives = 119/226 (52.65%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYN-DSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            DL  I+++GFRGEAL S+  V  +T+ T   G  HG ++  R G +E    A + V GT++ VE+LF+N  AR K +++   + + I+D+++R+ + H  +SFS    G  +    +  T     +I  +YG+  A  ++++E S+ + + S FV   +   +N NY++      LF+N R ++   L RA+   + +       P   + I + P   DVNV PT
Sbjct:   86 DLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTKLVARGGEVEEVIPATSPV-GTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHPEISFSLISDG--KEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFEISGFVSLPELTRANRNYIS------LFINGRYIKNFLLNRAILDGFGSKLMVGRFPLAVIHIHIDPYLADVNVHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STRP2 (DNA mismatch repair protein mutL OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=mutL PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.872e-22
Identity = 69/226 (30.53%), Postives = 119/226 (52.65%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYN-DSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            DL  I+++GFRGEAL S+  V  +T+ T   G  HG ++  R G +E    A + V GT++ VE+LF+N  AR K +++   + + I+D+++R+ + H  +SFS    G  +    +  T     +I  +YG+  A  ++++E S+ + + S FV   +   +N NY++      LF+N R ++   L RA+   + +       P   + I + P   DVNV PT
Sbjct:   86 DLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTKLVARGGEVEEVIPATSPV-GTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHPEISFSLISDG--KEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFEISGFVSLPELTRANRNYIS------LFINGRYIKNFLLNRAILDGFGSKLMVGRFPLAVIHIHIDPYLADVNVHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_EUBR3 (DNA mismatch repair protein mutL OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=mutL PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.872e-22
Identity = 74/230 (32.17%), Postives = 120/230 (52.17%), Query Frame = 2
Query:    2 RKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLE-ASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            R  EDL ++KS+GFRGEAL+S++ V  V + T T   L G R    +G  E   +   A  GT  +V++LFYN+ ARRK L+ +  + + I D++ ++A+ H ++SF    +   +  +H+    +R D I  ++G  ++S+L++++   EY     F+ K      N NY         F+N R V+   L RA+E  Y +   +   PF  +      E +DVNV PT
Sbjct:   82 RSAEDLLTVKSLGFRGEALSSISAVARVELITKTYDELTGTRYVI-EGSKELSNEEIGAPDGTTFIVKDLFYNVPARRKFLKTAQTEGSYISDMVEKLALSHPDISFKFINNNQTK--LHTSGNGNRKDIIYHIFGREISSSLLEVKHECEYFKVEGFIGKPVITRGNRNYEN------YFINGRYVKSNILSRAIEEAYKSFLMQHQYPFTVLYFTFFSE-LDVNVHPT 301          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: HEXB_STRR6 (DNA mismatch repair protein hexB OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=hexB PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.872e-22
Identity = 69/226 (30.53%), Postives = 119/226 (52.65%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYN-DSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            DL  I+++GFRGEAL S+  V  +T+ T   G  HG ++  R G +E    A + V GT++ VE+LF+N  AR K +++   + + I+D+++R+ + H  +SFS    G  +    +  T     +I  +YG+  A  ++++E S+ + + S FV   +   +N NY++      LF+N R ++   L RA+   + +       P   + I + P   DVNV PT
Sbjct:   86 DLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTKLVARGGEVEEVIPATSPV-GTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHPEISFSLISDG--KEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFEISGFVSLPELTRANRNYIS------LFINGRYIKNFLLNRAILDGFGSKLMVGRFPLAVIHIHIDPYLADVNVHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: HEXB_STRPN (DNA mismatch repair protein hexB OS=Streptococcus pneumoniae GN=hexB PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.872e-22
Identity = 69/226 (30.53%), Postives = 119/226 (52.65%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYN-DSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            DL  I+++GFRGEAL S+  V  +T+ T   G  HG ++  R G +E    A + V GT++ VE+LF+N  AR K +++   + + I+D+++R+ + H  +SFS    G  +    +  T     +I  +YG+  A  ++++E S+ + + S FV   +   +N NY++      LF+N R ++   L RA+   + +       P   + I + P   DVNV PT
Sbjct:   86 DLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTKLVARGGEVEEVIPATSPV-GTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHPEISFSLISDG--KEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFEISGFVSLPELTRANRNYIS------LFINGRYIKNFLLNRAILDGFGSKLMVGRFPLAVIHIHIDPYLADVNVHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_LISIN (DNA mismatch repair protein mutL OS=Listeria innocua GN=mutL PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.028e-21
Identity = 76/231 (32.90%), Postives = 115/231 (49.78%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYV-------SNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685
            DL  + ++GFRGEAL S+  V H+T+ T T G   G  +S   G +  E K+  A KGTQI V  LF+N  AR K L++   +   I D+L+R+A+ H ++SF    +G      +      ++  I  +YGVS+A   + ++A       S  FK+ GY        SN NY++        +N R ++   L +A++  Y    P    P I + I + P  VDVNV P
Sbjct:   87 DLFRVHTLGFRGEALPSIASVSHLTLETST-GETKGTTISLEGGKII-EQKSGHARKGTQIEVSQLFFNTPARLKYLKSLPTELGNITDILNRLALAHPDISFRFSHNGKPLLQTNGNGDLRQV--IAAIYGVSIARKSIPVKA------ESLDFKISGYAVLPEVNRSNRNYIS------TIINGRFIKNFALVKAIQEGYHTLLPIGRFPIIVLQIEMDPIIVDVNVHP 301          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_CLOP1 (DNA mismatch repair protein mutL OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=mutL PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.754e-21
Identity = 72/226 (31.86%), Postives = 118/226 (52.21%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688
            D+ SI ++GFRGEAL S+  +  V   +       G  +    G  E+    C+  +GTQI V +LF+N+ AR+K L+ ++ +   I DL++R+++ + +VSF    +   +  +++      +D IRT+YG S A NL+  E  E+ D++S    + G++ N     A +    LFVN R V+   L  AVE  + +       PF  + I   PE +DVN+ PT
Sbjct:   86 DIFSINTLGFRGEALPSIASIARVDFKSKVSDFDMGKELVISGGEKESLTD-CSMNRGTQIEVRDLFFNVPARKKFLKTTARESALINDLVNRISLANPDVSFKLFNNN--KKILNTYGNGKLIDVIRTIYGKSTAENLIYFE--EHKDTAS----VYGFIGNDTLARASRNNQSLFVNKRYVKNRSLTVAVENAFRSFNVTGKFPFFVLFIDTYPELIDVNIHPT 302          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_LISMF (DNA mismatch repair protein mutL OS=Listeria monocytogenes serotype 4b (strain F2365) GN=mutL PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.991e-21
Identity = 76/231 (32.90%), Postives = 114/231 (49.35%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYV-------SNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685
            DL  + ++GFRGEAL S+  V H+ + T T G   G  +S   G +  E K+  A KGTQI V  LF+N  AR K L++   +   I D+L+R+A+ H ++SF    +G      +      ++  I  +YGVS+A   V ++A       S  FK+ GY        SN NY++        +N R ++   L +A++  Y    P    P I + I + P  VDVNV P
Sbjct:   87 DLFRVHTLGFRGEALPSIASVSHLEMETST-GEAKGTTISLEGGKII-EQKSGHARKGTQIEVSQLFFNTPARLKYLKSLPTELGNITDILNRLALAHPDISFRFSHNGKPLLQTNGNGELRQV--IAAIYGVSIAKKSVPVKA------ESLDFKISGYAVLPEVNRSNRNYIS------TIINGRFIKNFALVKAIQEGYHTLLPIGRFPIIVLQIEMDPIIVDVNVHP 301          
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_LISMC (DNA mismatch repair protein mutL OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=mutL PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.991e-21
Identity = 76/231 (32.90%), Postives = 114/231 (49.35%), Query Frame = 2
Query:   14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYV-------SNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPP 685
            DL  + ++GFRGEAL S+  V H+ + T T G   G  +S   G +  E K+  A KGTQI V  LF+N  AR K L++   +   I D+L+R+A+ H ++SF    +G      +      ++  I  +YGVS+A   V ++A       S  FK+ GY        SN NY++        +N R ++   L +A++  Y    P    P I + I + P  VDVNV P
Sbjct:   87 DLFRVHTLGFRGEALPSIASVSHLEMETST-GEAKGTTISLEGGKII-EQKSGHARKGTQIEVSQLFFNTPARLKYLKSLPTELGNITDILNRLALAHPDISFRFSHNGKPLLQTNGNGDLRQV--IAAIYGVSIAKKSVPVKA------ESLDFKISGYAVLPEVNRSNRNYIS------TIINGRFIKNFALVKAIQEGYHTLLPIGRFPIIVLQIEMDPIIVDVNVHP 301          
The following BLAST results are available for this feature:
BLAST of CN189431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 433
Match NameE-valueIdentityDescription
MUTL_STRP87.872e-2230.00DNA mismatch repair protein mutL OS=Streptococcus ... [more]
MUTL_STRP47.872e-2230.53DNA mismatch repair protein mutL OS=Streptococcus ... [more]
MUTL_STRP27.872e-2230.53DNA mismatch repair protein mutL OS=Streptococcus ... [more]
MUTL_EUBR37.872e-2232.17DNA mismatch repair protein mutL OS=Eubacterium re... [more]
HEXB_STRR67.872e-2230.53DNA mismatch repair protein hexB OS=Streptococcus ... [more]
HEXB_STRPN7.872e-2230.53DNA mismatch repair protein hexB OS=Streptococcus ... [more]
MUTL_LISIN1.028e-2132.90DNA mismatch repair protein mutL OS=Listeria innoc... [more]
MUTL_CLOP11.754e-2131.86DNA mismatch repair protein mutL OS=Clostridium pe... [more]
MUTL_LISMF2.991e-2132.90DNA mismatch repair protein mutL OS=Listeria monoc... [more]
MUTL_LISMC2.991e-2132.90DNA mismatch repair protein mutL OS=Listeria monoc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001N13_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001N13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189431 ID=CN189431; Name=CN189431; organism=Citrus sinensis; type=EST; length=690bp
GAGGAAGTATGAGGACTTGCAATCAATCAAATCCATGGGTTTCAGAGGAG
AGGCTTTGGCAAGCATGACTTACGTCGGCCATGTTACCGTCACAACCATC
ACTAAAGGCCACTTGCACGGTTACCGGGTTTCATATAGAGATGGTGTCAT
GGAGAATGAACCAAAAGCATGTGCTGCTGTCAAAGGCACGCAGATAATGG
TGGAGAATTTGTTTTACAACATGATTGCTCGAAGGAAGACACTGCAAAAT
TCTTCTGATGATTATACAAAAATTGTTGATTTGCTAAGCCGGATGGCCAT
TCACCACACAAATGTGAGCTTCTCTTGCAGAAAGCACGGAGCTGCTAGAG
CAGATGTTCACTCTATTGCTACATCGTCAAGGCTTGATTCTATCAGAACT
GTATATGGAGTGTCGGTTGCTAGTAATTTAGTGCAGTTAGAAGCTTCAGA
GTACAATGATTCCTCAAGTTTTGTTTTCAAGATGGATGGCTACGTTTCCA
ATTCAAATTATGTGGCAAAGAAAACAACAATGGTGCTTTTTGTCAATGAT
AGGTTGGTTGAGTGTGCTCCTTTAAAGAGAGCTGTAGAAATTGTTTATGC
TGCAACCTTCCCTAAAGCATCAAAACCTTTCATCTATATGTCTATAGTGG
TACCACCTGAGCATGTTGATGTGAATGTGCCACCCACAAA
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