CN189430
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189430 vs. ExPASy Swiss-Prot
Match: EF100_ARATH (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=1 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 4.216e-32 Identity = 80/135 (59.26%), Postives = 85/135 (62.96%), Query Frame = -2 Query: 230 GKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFPLRINSGEPEPVRIKSKRXXXXXXXXXXXXXXXPKRRRKVAALASVPVRAGMEMGSGVGKVARVASCTRGDQLLV 634 GKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFET RMRGSRALLNFPLR+NSGEP+PVRIKSKR PK+RR VA AG M G+ V RGD+LLV Sbjct: 145 GKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLRVNSGEPDPVRIKSKR----SSFSSSNENGAPKKRRTVA--------AGGGMDKGLTVKCEVVEVARGDRLLV 267
BLAST of CN189430 vs. ExPASy Swiss-Prot
Match: EF101_ARATH (Ethylene-responsive transcription factor 2 OS=Arabidopsis thaliana GN=ERF2 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 6.731e-30 Identity = 77/139 (55.40%), Postives = 83/139 (59.71%), Query Frame = -2 Query: 227 KHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFPLRINSGEPEPVRIKSKR----XXXXXXXXXXXXXXXPKRRRKVAALASVPVRAGMEMGSGVGKVARVASCTRGDQLLVN 631 KHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFET RMRGSRALLNFPLR+NSGEP+PVRI SKR KRRRK L S V+ E+G TR D+LLV+ Sbjct: 115 KHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFRMRGSRALLNFPLRVNSGEPDPVRITSKRSSSSSSSSSSSTSSSENGKLKRRRKAENLTSEVVQVKCEVGDE----------TRVDELLVS 243
BLAST of CN189430 vs. ExPASy Swiss-Prot
Match: ERF1_TOBAC (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.716e-25 Identity = 69/137 (50.36%), Postives = 81/137 (59.12%), Query Frame = -2 Query: 227 GKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFPLRINSGEPEPVRIKSKRXXXXXXXXXXXXXXXPKRRRKVAALASVPVRAGMEMGSGVGKV-ARVASCTRGDQLLVN 634 G+HYRGVR+RPWGKFAAEIRDPAKNGARVWLGT+ET RMRGS+A LNFP RI EPEPVR+ +KR +RR+ VA S V +E S V + +V TR QLLV+ Sbjct: 102 GRHYRGVRRRPWGKFAAEIRDPAKNGARVWLGTYETDEEAAIAYDKAAYRMRGSKAHLNFPHRIGLNEPEPVRVTAKRRASPEPASSSENSSPKRRRKAVATEKSEAVE--VESKSNVLQTGCQVELLTRRHQLLVS 236
BLAST of CN189430 vs. ExPASy Swiss-Prot
Match: ERF2_NICSY (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.822e-25 Identity = 71/140 (50.71%), Postives = 84/140 (60.00%), Query Frame = -2 Query: 227 GKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFPLRINSGEPEPVRIKSKR---XXXXXXXXXXXXXXXPKRRRKVAALASVPVRAGMEMGSGVGKV-ARVASCTRGDQLLVN 634 G+HYRGVRQRPWGKFAAEIRDPAKNGARVWLGT+ET RMRGS+ALLNFP RI EPEPVR+ KR PKRRRK A+A+ ++ S V +V ++ G+QLLV+ Sbjct: 100 GRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPHRIGLNEPEPVRLTVKRRSPEPASSSISPASENSLPKRRRK--AVAAKQAELEVQSRSNVMQVGCQMEQFPVGEQLLVS 237
BLAST of CN189430 vs. ExPASy Swiss-Prot
Match: ERF2_TOBAC (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.992e-25 Identity = 70/140 (50.00%), Postives = 84/140 (60.00%), Query Frame = -2 Query: 227 GKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFPLRINSGEPEPVRIKSKR---XXXXXXXXXXXXXXXPKRRRKVAALASVPVRAGMEMGSGVGKV-ARVASCTRGDQLLVN 634 G+HYRGVRQRPWGKFAAEIRDPAKNGARVWLGT+ET RMRGS+ALLNFP RI EPEPVR+ +KR PKRRRK A+A+ ++ S +V ++ G+QLLV+ Sbjct: 96 GRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPHRIGLNEPEPVRLTAKRRSPEPASSSISSALENGSPKRRRK--AVAAKKAELEVQSRSNAMQVGCQMEQFPVGEQLLVS 233
BLAST of CN189430 vs. ExPASy Swiss-Prot
Match: ERF1_SOLLC (Ethylene-responsive transcription factor 1 OS=Solanum lycopersicum GN=ERF1 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.208e-24 Identity = 53/78 (67.95%), Postives = 59/78 (75.64%), Query Frame = -2 Query: 401 GKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFPLRINSGEPEPVRIKSKR 634 G+HYRGVRQRPWGKFAAEIRDPAKNGARVWLGT+E+ RMRG++ALLNFP RI EPEPVR+ KR Sbjct: 104 GRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYESAEEAALAYGKAAFRMRGTKALLNFPHRIGLNEPEPVRVTVKR 181
BLAST of CN189430 vs. ExPASy Swiss-Prot
Match: ERF99_ARATH (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 1.837e-19 Identity = 47/78 (60.26%), Postives = 55/78 (70.51%), Query Frame = -2 Query: 401 GKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFPLRINSGEPEPVRIKSKR 634 G YRGVR+RPWGKFAAEIRDP KNGARVWLGT+ET ++RGS+A LNFP I S + EPVRI+ +R Sbjct: 89 GMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFPHLIGSCKYEPVRIRPRR 166
BLAST of CN189430 vs. ExPASy Swiss-Prot
Match: EF102_ARATH (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.031e-18 Identity = 44/77 (57.14%), Postives = 52/77 (67.53%), Query Frame = -2 Query: 401 KHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFPLRINSGEPEPVRIKSKR 631 KHYRGVRQRPWGKFAAEIRDP K G+RVWLGTF+T R+RGS+A+LNFPL + +P + KR Sbjct: 154 KHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRGSKAILNFPLEVGKWKPRADEGEKKR 230
BLAST of CN189430 vs. ExPASy Swiss-Prot
Match: EF103_ARATH (Ethylene-responsive transcription factor 6 OS=Arabidopsis thaliana GN=ERF6 PE=2 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 2.933e-17 Identity = 40/68 (58.82%), Postives = 47/68 (69.12%), Query Frame = -2 Query: 428 KHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFPLRINSGEP 631 +HYRGVR RPWGKFAAEIRDP + G RVWLGTFET R+RGS+A+LNFPL ++ P Sbjct: 135 RHYRGVRMRPWGKFAAEIRDPTRRGTRVWLGTFETAIEAARAYDKEAFRLRGSKAILNFPLEVDKWNP 202
BLAST of CN189430 vs. ExPASy Swiss-Prot
Match: ERF5_NICSY (Ethylene-responsive transcription factor 5 OS=Nicotiana sylvestris GN=ERF5 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.115e-16 Identity = 39/69 (56.52%), Postives = 49/69 (71.01%), Query Frame = -2 Query: 425 KHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFPLRINSGEPE 631 KHYRGVRQRPWGKFAAEIRDP + G RVWLGTF+T ++RGS+A++NFPL + + + E Sbjct: 136 KHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAYKLRGSKAIVNFPLEVANFKQE 204 The following BLAST results are available for this feature:
BLAST of CN189430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189430 ID=CN189430; Name=CN189430; organism=Citrus sinensis; type=EST; length=635bpback to top |