CN189430

Overview
NameCN189430
Unique NameCN189430
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length635
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189430 vs. ExPASy Swiss-Prot
Match: ERF5_TOBAC (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum GN=ERF5 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.456e-16
Identity = 38/63 (60.32%), Postives = 46/63 (73.02%), Query Frame = -2
Query:  443 KHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFPLRI 631
            KHYRGVRQRPWGKFAAEIRDP + G RVWLGTF+T             ++RGS+A++NFPL +
Sbjct:  143 KHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAFKLRGSKAIVNFPLEV 205          
BLAST of CN189430 vs. ExPASy Swiss-Prot
Match: EF105_ARATH (Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana GN=ERF105 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.483e-16
Identity = 41/82 (50.00%), Postives = 53/82 (64.63%), Query Frame = -2
Query:  401 KHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFPLRINSGE-----PEPVRIKSKR 631
            +HYRGVR+RPWGK+AAEIRDP K G RVWLGTF+T             ++RGS+A+LNFPL     E      + + +K+KR
Sbjct:   70 RHYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFPLEAGKHEDLGDNKKTISLKAKR 151          
BLAST of CN189430 vs. ExPASy Swiss-Prot
Match: PTI5_SOLLC (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum GN=PTI5 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.235e-16
Identity = 41/64 (64.06%), Postives = 47/64 (73.44%), Query Frame = -2
Query:  443 GKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFPLRI 634
            GK YRGVR+RPWGK+AAEIRD A++GARVWLGTFET             RMRG++ALLNFP  I
Sbjct:   56 GKKYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNFPSEI 119          
BLAST of CN189430 vs. ExPASy Swiss-Prot
Match: EF107_ARATH (Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana GN=ERF107 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.532e-16
Identity = 37/61 (60.66%), Postives = 46/61 (75.41%), Query Frame = -2
Query:  449 KHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFPL 631
            +HYRGVR+RPWGKFAAEIRDPAK G+R+WLGTFE+             ++RG +A+LNFPL
Sbjct:  105 RHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAYDYAAFKLRGRKAVLNFPL 165          
BLAST of CN189430 vs. ExPASy Swiss-Prot
Match: EF106_ARATH (Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana GN=ERF106 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.532e-16
Identity = 37/61 (60.66%), Postives = 46/61 (75.41%), Query Frame = -2
Query:  449 KHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFPL 631
            +HYRGVR+RPWGKFAAEIRDPAK G+R+WLGTFE+             ++RG +A+LNFPL
Sbjct:  108 RHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAVLNFPL 168          
BLAST of CN189430 vs. ExPASy Swiss-Prot
Match: EF104_ARATH (Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana GN=ERF104 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.988e-15
Identity = 34/63 (53.97%), Postives = 45/63 (71.43%), Query Frame = -2
Query:  443 KHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFPLRI 631
            +HYRGVR+RPWGK+AAEIRDP K G R+WLGT++T             ++RG +A+LNFPL +
Sbjct:   86 RHYRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFPLDV 148          
BLAST of CN189430 vs. ExPASy Swiss-Prot
Match: EF114_ARATH (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana GN=ERF114 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.779e-14
Identity = 39/66 (59.09%), Postives = 45/66 (68.18%), Query Frame = -2
Query:  434 KHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFPLRINSG 631
            +HYRGVRQRPWGK+AAEIRDP K  ARVWLGTFET             + +GS+A LNFP R+  G
Sbjct:   88 RHYRGVRQRPWGKWAAEIRDP-KKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNFPERVQLG 152          
BLAST of CN189430 vs. ExPASy Swiss-Prot
Match: ERF98_ARATH (Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana GN=ERF098 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.964e-14
Identity = 35/58 (60.34%), Postives = 42/58 (72.41%), Query Frame = -2
Query:  452 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFP 625
            +RGVR+RPWGKFAAEIRDP++NGAR+WLGTFET              +RG  A+LNFP
Sbjct:   20 FRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAFNLRGHLAILNFP 77          
BLAST of CN189430 vs. ExPASy Swiss-Prot
Match: ERF95_ARATH (Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana GN=ERF095 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.964e-14
Identity = 36/58 (62.07%), Postives = 41/58 (70.69%), Query Frame = -2
Query:  452 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFP 625
            YRGVR+RPWGK+AAEIRD A++GARVWLGTF T              MRG RA+LNFP
Sbjct:   14 YRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAILNFP 71          
BLAST of CN189430 vs. ExPASy Swiss-Prot
Match: ERF97_ARATH (Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana GN=ERF14 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.153e-13
Identity = 36/64 (56.25%), Postives = 41/64 (64.06%), Query Frame = -2
Query:  434 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFPLRINSG 625
            YRGVR+RPWGK+AAEIRD  K+G RVWLGTF+T              MRG  A+LNFP   N G
Sbjct:   20 YRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRAAYSMRGKAAILNFPHEYNMG 83          
The following BLAST results are available for this feature:
BLAST of CN189430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
ERF5_TOBAC1.456e-1660.32Ethylene-responsive transcription factor 5 OS=Nico... [more]
EF105_ARATH2.483e-1650.00Ethylene-responsive transcription factor ERF105 OS... [more]
PTI5_SOLLC4.235e-1664.06Pathogenesis-related genes transcriptional activat... [more]
EF107_ARATH5.532e-1660.66Ethylene-responsive transcription factor ERF107 OS... [more]
EF106_ARATH5.532e-1660.66Ethylene-responsive transcription factor ERF106 OS... [more]
EF104_ARATH7.988e-1553.97Ethylene-responsive transcription factor ERF104 OS... [more]
EF114_ARATH1.779e-1459.09Ethylene-responsive transcription factor ERF114 OS... [more]
ERF98_ARATH3.964e-1460.34Ethylene-responsive transcription factor ERF098 OS... [more]
ERF95_ARATH3.964e-1462.07Ethylene-responsive transcription factor ERF095 OS... [more]
ERF97_ARATH1.153e-1356.25Ethylene-responsive transcription factor 14 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001N13_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001N13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189430 ID=CN189430; Name=CN189430; organism=Citrus sinensis; type=EST; length=635bp
TTTTTTTTTTTTTTTTAACACACTAACTCTTTTATATTCACAATTCCCAC
TCTCTTTTTTTTTTTTTCTTTTTTTTTTTTGCAAACACCCTTCAAAGTAC
AAACAAACTTACAAATTACAAAATCACGTGCGGGGATGATCACCCCCCCG
GCCCAAGAAAAGAAGAAAAGAACTAGTAGATCTCTCGGATAAGATCGACT
TCGGAGTTTCTTCCACGTCAGCGTCAGTTTACCAATAGCTGGTCACCACG
TGTACAGGAGGCCACTCGCGCCACTTTTCCAACTCCACTTCCCATTTCCA
TCCCGGCTCGTACTGGCACCGACGCCAAGGCAGCCACCTTTCTCCTCCTC
TTGGGGGACACACTGCCACTATCCGTGGACGAAGACGGCTCCGGCGTGGA
CCGCTTCGACTTAATTCTGACCGGCTCGGGCTCACCCGAGTTGATCCTTA
GGGGAAAATTCAAAAGAGCCCTTGATCCCCTCATCCTGTAAGCGGCTCGG
TCATAAGCCAGAGCCGCATCCTCAGCCGTCTCGAAAGTCCCGAGCCAAAC
CCGAGCCCCATTCTTAGCCGGGTCACGTATTTCGGCCGCAAACTTCCCCC
AAGGTCTCTGCCTAACCCCCCTGTAATGCTTCCCC
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