CN189430
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189430 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.846e-12 Identity = 34/58 (58.62%), Postives = 42/58 (72.41%), Query Frame = -2 Query: 452 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFP 625 YRG+RQRPWGK+AAEIRDP + GAR+WLGTF+T R+RGS+A +NFP Sbjct: 125 YRGIRQRPWGKWAAEIRDP-REGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFP 181
BLAST of CN189430 vs. ExPASy Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.329e-12 Identity = 34/58 (58.62%), Postives = 41/58 (70.69%), Query Frame = -2 Query: 452 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFP 625 YRG+RQRPWGK+AAEIRDP+K G RVWLGTF+T ++RG +A LNFP Sbjct: 50 YRGIRQRPWGKWAAEIRDPSK-GVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNFP 106
BLAST of CN189430 vs. ExPASy Swiss-Prot
Match: ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana GN=ABR1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.266e-12 Identity = 40/76 (52.63%), Postives = 47/76 (61.84%), Query Frame = -2 Query: 419 KHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFP-----LRINSGEPEPV 631 + YRGVRQRPWGK+AAEIRDP K ARVWLGTF+ R RG++A LNFP +R S E +PV Sbjct: 183 RRYRGVRQRPWGKWAAEIRDPFK-AARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFPENVKLVRPASTEAQPV 257
BLAST of CN189430 vs. ExPASy Swiss-Prot
Match: ERF80_ARATH (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana GN=ERF9 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.410e-11 Identity = 33/60 (55.00%), Postives = 39/60 (65.00%), Query Frame = -2 Query: 449 HYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFPL 628 H+RGVR+RPWG++AAEIRDP K RVWLGTF+T RGS+A NFPL Sbjct: 32 HFRGVRKRPWGRYAAEIRDPGKK-TRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFPL 90
BLAST of CN189430 vs. ExPASy Swiss-Prot
Match: ERF4_NICSY (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris GN=ERF4 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.410e-11 Identity = 33/60 (55.00%), Postives = 39/60 (65.00%), Query Frame = -2 Query: 449 HYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFPL 628 HYRGVR+RPWG++AAEIRDP K +RVWLGTF+T RG +A NFPL Sbjct: 26 HYRGVRKRPWGRYAAEIRDPGKK-SRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFPL 84
BLAST of CN189430 vs. ExPASy Swiss-Prot
Match: RAP23_ARATH (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-3 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.141e-11 Identity = 33/58 (56.90%), Postives = 39/58 (67.24%), Query Frame = -2 Query: 452 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFP 625 YRG+R+RPWGK+AAEIRDP K G RVWLGTF T ++RG +A LNFP Sbjct: 79 YRGIRKRPWGKWAAEIRDPRK-GVRVWLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFP 135
BLAST of CN189430 vs. ExPASy Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.141e-11 Identity = 37/75 (49.33%), Postives = 46/75 (61.33%), Query Frame = -2 Query: 401 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFPLRINSGEPEPVRIKSKR 625 YRG+RQRPWGK+AAEIRDP K G+R WLGTF+T R+RG++A +NFP E P + KR Sbjct: 128 YRGIRQRPWGKWAAEIRDPRK-GSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFP-----EEKNPSVVSQKR 196
BLAST of CN189430 vs. ExPASy Swiss-Prot
Match: ERF82_ARATH (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana GN=ERF3 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.141e-11 Identity = 35/75 (46.67%), Postives = 45/75 (60.00%), Query Frame = -2 Query: 401 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFPLRINSGEPEPVRIKSKR 625 +RGVR+RPWG+FAAEIRDP K ARVWLGTF++ +RG +A NFP+ +S P +R R Sbjct: 28 FRGVRKRPWGRFAAEIRDPWKK-ARVWLGTFDSAEEAARAYDSAARNLRGPKAKTNFPIDSSSPPPPNLRFNQIR 101
BLAST of CN189430 vs. ExPASy Swiss-Prot
Match: ERF4_TOBAC (Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum GN=ERF4 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.141e-11 Identity = 33/67 (49.25%), Postives = 40/67 (59.70%), Query Frame = -2 Query: 428 HYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFPLRINSGEP 628 HYRGVR+RPWG++AAEIRDP K +RVWLGTF+T RG +A NFP + P Sbjct: 26 HYRGVRKRPWGRYAAEIRDPGKK-SRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFPSPTENQSP 91
BLAST of CN189430 vs. ExPASy Swiss-Prot
Match: CRF4_ARATH (Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana GN=CRF4 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.141e-11 Identity = 37/72 (51.39%), Postives = 45/72 (62.50%), Query Frame = -2 Query: 416 KHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFPLRINSGEPEPVR 631 K YRGVRQRPWGK+AAEIRDP + R+WLGTF T ++RG AL NF ++ EPEPV+ Sbjct: 115 KKYRGVRQRPWGKWAAEIRDPEQR-RRIWLGTFATAEEAAIVYDNAAIKLRGPDALTNFTVQ---PEPEPVQ 182 The following BLAST results are available for this feature:
BLAST of CN189430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189430 ID=CN189430; Name=CN189430; organism=Citrus sinensis; type=EST; length=635bpback to top |