EY676450
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY676450 vs. ExPASy Swiss-Prot
Match: MAD57_ORYSJ (MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica GN=MADS57 PE=2 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 1.717e-21 Identity = 60/144 (41.67%), Postives = 87/144 (60.42%), Query Frame = 1 Query: 193 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQASFEEYIKLKEETGGPTALAKTIFWGKLGRLG*KEWEHLEKQRGSSLGQVRALKN 624 MGRGK+ ++RI+N +RQVTF+KRRNGLLKKA ELS+LCDAEV L++FSS G+LYEF SS +M +++Y L N + E + E L+++ K + +L LG ++ + LE + SL +R K+ Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEF-SSTNMKTVIDRYTNAKEELLGGN--ATSEIKIWQREAASLRQQLHNLQESHKQLMGEELSGLGVRDLQGLENRLEISLRNIRMRKD 141
BLAST of EY676450 vs. ExPASy Swiss-Prot
Match: AGL12_ARATH (Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana GN=AGL12 PE=2 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 2.242e-21 Identity = 62/150 (41.33%), Postives = 85/150 (56.67%), Query Frame = 1 Query: 193 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYG-------TLQANHQSAKETQASFEEYIKLKEETGGPTALAKTIFWGKLGRLG*KEWEHLEKQRGSSLGQVRALK 621 M RGK++LKRIEN ++RQVTF KRR GLLKKA ELSVLCDAE+ ++IFS +GKL+E + +M ++KY +C+ G T A Q +E LK+E +F G G + +E LEK + Q+R+ K Sbjct: 1 MARGKIQLKRIENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATKGTMEGMIDKYMKCTGGGRGSSSATFTAQEQLQPPNLDPKDEINVLKQEIEMLQKGISYMFGGGDGAMNLEELLLLEKHLEYWISQIRSAK 150
BLAST of EY676450 vs. ExPASy Swiss-Prot
Match: MAD29_ORYSJ (MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica GN=MADS29 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.824e-21 Identity = 63/160 (39.38%), Postives = 93/160 (58.13%), Query Frame = 1 Query: 193 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCS-SPSMHKTLEKYERCSYGTLQANHQSAKETQASFEEYIKLKEETGGPTALAKTIFWGKLGRLG*KEWEHLEKQRGSSLGQVRALKNPESLGKAF*NFKGRE 669 MGRGK+E+KRIEN NRQVTF+KRR GLLKKA EL+VLCDA V ++IFSS GK++E+CS + S+ + +E Y+ + + + Q F E +++ E + L L + LE+Q S+ +VRA K+ + L + N + +E Sbjct: 1 MGRGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPTCSLRELIEHYQTVT----NTHFEEINHDQQIFVEMTRMRNEMEKLDGGIRRFTGDDLSNLTLADINDLEQQLEFSVTKVRARKH-QLLNQQLDNLRRKE 155
BLAST of EY676450 vs. ExPASy Swiss-Prot
Match: AGL15_ARATH (Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana GN=AGL15 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.824e-21 Identity = 68/145 (46.90%), Postives = 89/145 (61.38%), Query Frame = 1 Query: 193 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQASFE--EYIKLKEETGGPTALAKTIFWGKLGRLG*KEWEHLEKQRGSSLGQVRALK 621 MGRGK+E+KRIEN +RQVTF+KRR+GLLKKA ELSVLCDAEVA+I+FS GKL+E+ SS M +TL +Y NHQS+ ++A + E LK++ + L L KE + LE+Q +L VR K Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEY-SSTGMKQTLSRY---------GNHQSSSASKAEEDCAEVDILKDQLSKLQEKHLQLQGKGLNPLTFKELQSLEQQLYHALITVRERK 135
BLAST of EY676450 vs. ExPASy Swiss-Prot
Match: MAD20_ORYSJ (MADS-box transcription factor 20 OS=Oryza sativa subsp. japonica GN=MADS20 PE=2 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 4.995e-21 Identity = 60/147 (40.82%), Postives = 92/147 (62.59%), Query Frame = 1 Query: 193 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSS-PSMHKTLEKYER---CSYGTLQANHQSAKETQASFEEYIKLKEETGGPTALAKTIFWGKLGRLG*KEWEHLEKQRGSSLGQVRALK 621 MGRGKV+++RIEN+++RQVTF+KRR GLLKKA+E++VLCD +VA I+FS++G L+ + SS +M + LEKY+R S G E S+ ++IKL+ + + +L L ++ + LE Q +SL +R+ K Sbjct: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASSHTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSY-DHIKLRGRIEALKKSQRNLMGQELDSLTLQDIQQLENQIDTSLNNIRSRK 146
BLAST of EY676450 vs. ExPASy Swiss-Prot
Match: MAD23_ORYSJ (MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica GN=MADS23 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.453e-20 Identity = 58/144 (40.28%), Postives = 88/144 (61.11%), Query Frame = 1 Query: 193 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQASFEEYIKLKEETGGPTALAKTIFWGKLGRLG*KEWEHLEKQRGSSLGQVRALKN 624 MGRGK+E+KRI+N +RQVTF+KRR+GL KKA ELS+LCDAEV L++FSS +LY+F SS SM +E+Y Q + S+ E + +E L+++ + + +L L ++ ++LE + SL +R K+ Sbjct: 1 MGRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASS-SMKSIIERYNETKEDPHQTMNASS-EAKLWQQEAASLRQQLHNLQEYHRQLLGQQLSGLDVEDLQNLESKLEMSLKNIRLRKD 142
BLAST of EY676450 vs. ExPASy Swiss-Prot
Match: MAD33_ORYSJ (MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica GN=MADS33 PE=2 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 3.238e-20 Identity = 59/143 (41.26%), Postives = 86/143 (60.14%), Query Frame = 1 Query: 193 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQASFEEYIKLKEETGGPTALAKTIFWGKLGRLG*KEWEHLEKQRGSSLGQVRALK 621 M RGKV+++RIEN ++RQVTF KRR GLLKKA ELSVLCDA+V +IIFSS+GKL+E ++ +MH +E+Y+ G Q + + Q + + L+EE ++ + G G + + LEK + Q+R K Sbjct: 1 MVRGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATNGNMHNLVERYQSNVAGG-QMEPGALQRQQVAEQGIFLLREEIDLLQRGLRSTYGGGAGEMTLDKLHALEKGLELWIYQIRTTK 142
BLAST of EY676450 vs. ExPASy Swiss-Prot
Match: FLC_ARATH (MADS-box protein FLOWERING LOCUS C OS=Arabidopsis thaliana GN=FLC PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 3.238e-20 Identity = 70/163 (42.94%), Postives = 98/163 (60.12%), Query Frame = 1 Query: 193 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQA-NHQSAKETQASFEEYIKLKEETGGPTALAKTIFWGKLGRLG*KEWEHLEKQRGSSLGQVRALKNPESLGKAF*NFKGREKWL 678 MGR K+E+KRIENK +RQVTF+KRRNGL++KA +LSVLCDA VAL++ S+ GKLY F S ++ K L++Y + L+A +HQS S E ++L + + + K + L +L EHLE ++L RA K E + K N K +EK L Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSGDNLVKILDRYGKQHADDLKALDHQSKALNYGSHYELLELVDSKLVGSNV-KNVSIDALVQLE----EHLE----TALSVTRA-KKTELMLKLVENLKEKEKML 153
BLAST of EY676450 vs. ExPASy Swiss-Prot
Match: MAD27_ORYSJ (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica GN=MADS27 PE=2 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 4.228e-20 Identity = 61/144 (42.36%), Postives = 85/144 (59.03%), Query Frame = 1 Query: 193 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQASFEEYIKLKEETGGPTALAKTIFWGKLGRLG*KEWEHLEKQRGSSLGQVRALKN 624 MGRGK+ ++RI+N +RQVTF+KRRNG+ KKA EL++LCDAEV L+IFSS G+LYE+ SS SM +++Y + S QA E + E L+++ + + L L KE + LE Q SL VR K+ Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEY-SSTSMKSVIDRYGK-SKDEQQAVANPNSELKFWQREAASLRQQLHNLQENHRQLMGEDLSGLNVKELQSLENQLEISLRSVRTKKD 142
BLAST of EY676450 vs. ExPASy Swiss-Prot
Match: TT16_ARATH (Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana GN=TT16 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.230e-19 Identity = 58/145 (40.00%), Postives = 84/145 (57.93%), Query Frame = 1 Query: 193 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPS-MHKTLEKYERCSYGTLQANHQSAKETQASFEEYIKLKEETGGPTALAKTIFWGKLGRLG*KEWEHLEKQRGSSLGQVRALKN 624 MGRGK+E+K+IEN+ RQVTF+KRR GL+KK ELS+LCDA + LI+FS+ GKL EFCS + M + +++Y + L +H ++ E L+ ET + L + E + LE+Q S+ +VR KN Sbjct: 1 MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSEQNRMPQLIDRYLHTNGLRLPDHHDDQEQLHHEME---LLRRETCNLELRLRPFHGHDLASIPPNELDGLERQLEHSVLKVRERKN 142 The following BLAST results are available for this feature:
BLAST of EY676450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 118
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Sequences
The
following sequences are available for this feature:
EST sequence >EY676450 ID=EY676450; Name=EY676450; organism=Citrus sinensis; type=EST; length=944bpback to top |