CN189429

Overview
NameCN189429
Unique NameCN189429
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN189429 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUDO (Non-specific lipid-transfer protein 1 OS=Prunus domestica PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.738e-21
Identity = 32/52 (61.54%), Postives = 40/52 (76.92%), Query Frame = 3 
Query:  240 TTPDRQAACNCLKRAY*TIRGIKPNVAAGLPSQCGVRIPYKISPSTNCSRVR 395
            TT DR+AACNCLK+   +I G+ PN AA LP +CGV +PYKIS STNC+ V+
Sbjct:   40 TTADRRAACNCLKQLSGSIPGVNPNNAAALPGKCGVNVPYKISASTNCATVK 91

HSP 2 Score: 50.8322 bits (120), Expect = 2.738e-21
Identity = 21/40 (52.50%), Postives = 31/40 (77.50%), Query Frame = 2 
Query:  119 ITCGQVTASLDPCIPFLRTGGRFPPPPCCSGVRSLNGAAR 238
            ITCGQV+++L PCI +++ GG   PP CC+G+R++N  AR
Sbjct:    1 ITCGQVSSNLAPCINYVKGGGAV-PPACCNGIRNVNNLAR 39
[Close]
BLAST of CN189429 vs. ExPASy Swiss-Prot
Match: NLTP4_LENCU (Non-specific lipid-transfer protein 4 (Fragment) OS=Lens culinaris PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 3.562e-21
Identity = 35/56 (62.50%), Postives = 40/56 (71.43%), Query Frame = 3 
Query:  228 APPGTTPDRQAACNCLKRAY*TIRGIKPNVAAGLPSQCGVRIPYKISPSTNCSRVR 395
            A   TTPDRQAACNCLK A  +I  +  N AA LP +CGV IPYKIS STNC+ V+
Sbjct:   54 AAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTSTNCNTVK 109

HSP 2 Score: 49.6766 bits (117), Expect = 3.562e-21
Identity = 23/44 (52.27%), Postives = 28/44 (63.64%), Query Frame = 2 
Query:  116 AITCGQVTASLDPCIPFLRTGGRFPPPPCCSGVRSLNGAARNHP 247
            AI+CG VT+ L PC+ +L TGG  P P CC GV+ L  AA   P
Sbjct:   18 AISCGAVTSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTP 60
[Close]
BLAST of CN189429 vs. ExPASy Swiss-Prot
Match: NLTP6_LENCU (Non-specific lipid-transfer protein 6 OS=Lens culinaris PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 6.031e-21
Identity = 35/56 (62.50%), Postives = 40/56 (71.43%), Query Frame = 3 
Query:  228 APPGTTPDRQAACNCLKRAY*TIRGIKPNVAAGLPSQCGVRIPYKISPSTNCSRVR 395
            A   TTPDRQAACNCLK A  +I  +  N AA LP +CGV IPYKIS STNC+ V+
Sbjct:   62 AAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVDIPYKISTSTNCNTVK 117

HSP 2 Score: 49.6766 bits (117), Expect = 6.031e-21
Identity = 23/44 (52.27%), Postives = 28/44 (63.64%), Query Frame = 2 
Query:  116 AITCGQVTASLDPCIPFLRTGGRFPPPPCCSGVRSLNGAARNHP 247
            AI+CG VT+ L PC+ +L TGG  P P CC GV+ L  AA   P
Sbjct:   26 AISCGAVTSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTP 68
[Close]
BLAST of CN189429 vs. ExPASy Swiss-Prot
Match: NLTP5_LENCU (Non-specific lipid-transfer protein 5 OS=Lens culinaris PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.847e-21
Identity = 34/56 (60.71%), Postives = 40/56 (71.43%), Query Frame = 3 
Query:  228 APPGTTPDRQAACNCLKRAY*TIRGIKPNVAAGLPSQCGVRIPYKISPSTNCSRVR 395
            A   TTPDRQAACNC+K A  +I  +  N AA LP +CGV IPYKIS STNC+ V+
Sbjct:   61 AAANTTPDRQAACNCMKSAASSITKLNTNNAAALPGKCGVNIPYKISTSTNCNTVK 116

HSP 2 Score: 49.2914 bits (116), Expect = 7.847e-21
Identity = 23/44 (52.27%), Postives = 27/44 (61.36%), Query Frame = 2 
Query:  116 AITCGQVTASLDPCIPFLRTGGRFPPPPCCSGVRSLNGAARNHP 247
            AI+CG VT  L PC+ +L TGG  P P CC GV+ L  AA   P
Sbjct:   25 AISCGAVTGDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTP 67
[Close]
BLAST of CN189429 vs. ExPASy Swiss-Prot
Match: NLTP2_LENCU (Non-specific lipid-transfer protein 2 OS=Lens culinaris PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 7.847e-21
Identity = 34/56 (60.71%), Postives = 40/56 (71.43%), Query Frame = 3 
Query:  228 APPGTTPDRQAACNCLKRAY*TIRGIKPNVAAGLPSQCGVRIPYKISPSTNCSRVR 395
            A   TTPDRQAACNCLK A  +I  +  N AA LP +CGV IPYKIS +TNC+ V+
Sbjct:   62 AAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTTTNCNTVK 117

HSP 2 Score: 49.6766 bits (117), Expect = 7.847e-21
Identity = 23/44 (52.27%), Postives = 28/44 (63.64%), Query Frame = 2 
Query:  116 AITCGQVTASLDPCIPFLRTGGRFPPPPCCSGVRSLNGAARNHP 247
            AI+CG VT+ L PC+ +L TGG  P P CC GV+ L  AA   P
Sbjct:   26 AISCGAVTSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTP 68
[Close]
BLAST of CN189429 vs. ExPASy Swiss-Prot
Match: NLTP1_TOBAC (Non-specific lipid-transfer protein 1 OS=Nicotiana tabacum GN=LTP1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.728e-20
Identity = 35/52 (67.31%), Postives = 38/52 (73.08%), Query Frame = 3 
Query:  240 TTPDRQAACNCLKRAY*TIRGIKPNVAAGLPSQCGVRIPYKISPSTNCSRVR 395
            TT DRQ AC CLK A   I GI    AAGLPS CGV IPYKISPST+CS+V+
Sbjct:   63 TTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKVQ 114

HSP 2 Score: 48.521 bits (114), Expect = 1.728e-20
Identity = 23/45 (51.11%), Postives = 30/45 (66.67%), Query Frame = 2 
Query:  104 PVTNAITCGQVTASLDPCIPFLRTGGRFPPPPCCSGVRSLNGAAR 238
            P   AITCGQVT++L PC+ +LR  G  P   CC GV++L  +AR
Sbjct:   20 PCAEAITCGQVTSNLAPCLAYLRNTG--PLGRCCGGVKALVNSAR 62
[Close]
BLAST of CN189429 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLLC (Non-specific lipid-transfer protein 1 OS=Solanum lycopersicum GN=TSW12 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.728e-20
Identity = 33/52 (63.46%), Postives = 38/52 (73.08%), Query Frame = 3 
Query:  240 TTPDRQAACNCLKRAY*TIRGIKPNVAAGLPSQCGVRIPYKISPSTNCSRVR 395
            TT DR+ AC CLK A   I+GI  N AAG+PS C V IPYKISPST+CS V+
Sbjct:   63 TTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114

HSP 2 Score: 51.9878 bits (123), Expect = 1.728e-20
Identity = 24/45 (53.33%), Postives = 32/45 (71.11%), Query Frame = 2 
Query:  104 PVTNAITCGQVTASLDPCIPFLRTGGRFPPPPCCSGVRSLNGAAR 238
            P   A+TCGQVTA L PC+P+L+  GR P   CC GV++L G+A+
Sbjct:   20 PHAEALTCGQVTAGLAPCLPYLQ--GRGPLGGCCGGVKNLLGSAK 62
[Close]
BLAST of CN189429 vs. ExPASy Swiss-Prot
Match: NLTP1_LENCU (Non-specific lipid-transfer protein 1 OS=Lens culinaris PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.249e-20
Identity = 31/52 (59.62%), Postives = 39/52 (75.00%), Query Frame = 3 
Query:  240 TTPDRQAACNCLKRAY*TIRGIKPNVAAGLPSQCGVRIPYKISPSTNCSRVR 395
            TT DR+AACNCLK +  +I G+KP   A LP +CGVR+PY IS STNC+ +R
Sbjct:   66 TTIDRRAACNCLKSSAGSISGLKPGNVATLPGKCGVRLPYTISTSTNCNTIR 117

HSP 2 Score: 51.2174 bits (121), Expect = 2.249e-20
Identity = 23/41 (56.10%), Postives = 30/41 (73.17%), Query Frame = 2 
Query:  116 AITCGQVTASLDPCIPFLRTGGRFPPPPCCSGVRSLNGAAR 238
            AI+CG V+ +L PC+ +L+ GG  P P CC GV+ LNGAAR
Sbjct:   26 AISCGTVSGALVPCLTYLK-GGPGPSPQCCGGVKRLNGAAR 65
[Close]
BLAST of CN189429 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLPN (Non-specific lipid-transfer protein 1 OS=Solanum pennellii GN=LTP1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.249e-20
Identity = 33/52 (63.46%), Postives = 38/52 (73.08%), Query Frame = 3 
Query:  240 TTPDRQAACNCLKRAY*TIRGIKPNVAAGLPSQCGVRIPYKISPSTNCSRVR 395
            TT DR+ AC CLK A   I+GI  N AAG+PS C V IPYKISPST+CS V+
Sbjct:   63 TTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114

HSP 2 Score: 51.6026 bits (122), Expect = 2.249e-20
Identity = 24/45 (53.33%), Postives = 31/45 (68.89%), Query Frame = 2 
Query:  104 PVTNAITCGQVTASLDPCIPFLRTGGRFPPPPCCSGVRSLNGAAR 238
            P   A+TCGQVTA L PC+P+L+  GR P   CC GV+ L G+A+
Sbjct:   20 PHAEALTCGQVTAGLAPCLPYLQ--GRGPLGGCCGGVKGLLGSAK 62
[Close]
BLAST of CN189429 vs. ExPASy Swiss-Prot
Match: NLTP_MAIZE (Non-specific lipid-transfer protein OS=Zea mays PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 3.769e-20
Identity = 31/51 (60.78%), Postives = 37/51 (72.55%), Query Frame = 3 
Query:  240 TTPDRQAACNCLKRAY*TIRGIKPNVAAGLPSQCGVRIPYKISPSTNCSRV 392
            TT DR+AACNCLK A   + G+    AA +PS+CGV IPY IS ST+CSRV
Sbjct:   69 TTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRV 119

HSP 2 Score: 53.1434 bits (126), Expect = 3.769e-20
Identity = 24/41 (58.54%), Postives = 29/41 (70.73%), Query Frame = 2 
Query:  116 AITCGQVTASLDPCIPFLRTGGRFPPPPCCSGVRSLNGAAR 238
            AI+CGQV +++ PCI + R  G  P   CCSGVRSLN AAR
Sbjct:   28 AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAAR 68
The following BLAST results are available for this feature:
BLAST of CN189429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
NLTP1_PRUDO2.738e-2161.54Non-specific lipid-transfer protein 1 OS=Prunus do... [more]
NLTP4_LENCU3.562e-2162.50Non-specific lipid-transfer protein 4 (Fragment) O... [more]
NLTP6_LENCU6.031e-2162.50Non-specific lipid-transfer protein 6 OS=Lens culi... [more]
NLTP5_LENCU7.847e-2160.71Non-specific lipid-transfer protein 5 OS=Lens culi... [more]
NLTP2_LENCU7.847e-2160.71Non-specific lipid-transfer protein 2 OS=Lens culi... [more]
NLTP1_TOBAC1.728e-2067.31Non-specific lipid-transfer protein 1 OS=Nicotiana... [more]
NLTP1_SOLLC1.728e-2063.46Non-specific lipid-transfer protein 1 OS=Solanum l... [more]
NLTP1_LENCU2.249e-2059.62Non-specific lipid-transfer protein 1 OS=Lens culi... [more]
NLTP1_SOLPN2.249e-2063.46Non-specific lipid-transfer protein 1 OS=Solanum p... [more]
NLTP_MAIZE3.769e-2060.78Non-specific lipid-transfer protein OS=Zea mays PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001N12_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001N12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189429 ID=CN189429; Name=CN189429; organism=Citrus sinensis; type=EST; length=616bp
CGGTTGATAACTAGCTATAACCAAGCAAAAGCCTCCCTGAAGAATCCTCA
TGGCTGCTCTTAAGCTTGTTTGTGCTTTGCTTTTGTGCATTCTGGTGACT
GCCCCGGTGACTAATGCCATAACATGCGGGCAGGTGACAGCCTCCTTGGA
TCCATGCATCCCTTTCTTGAGAACTGGAGGGCGTTTTCCTCCACCGCCAT
GCTGTAGCGGCGTCAGGTCTCTCAACGGCGCCGCCAGGAACCACCCCTGA
CCGCCAAGCTGCATGCAACTGCTTGAAACGAGCTTACTGAACAATCCGCG
GCATCAAACCTAATGTTGCCGCTGGCCTTCCTAGTCAATGTGGAGTCAGA
ATTCCTTACAAGATCAGCCCCAGCACCAACTGCTCTAGGGTCAGGTGAAG
TTGAATTTGAGCTCTGTGACTTTCCAAGTATGATTGACTGATAAGAATAA
ATAAATAAAGAATATCTATGTTAATTTCTTTGTCCGAACGAGTCTCCACT
TGTATGAGTTTCACTCTCATGTCATGTGTGTATATTTGCTTGTTATGTCA
TATTAAATATGTAAACGCCATCTGTGTTTTGAGTGATTAATTATAGTTAT
TTTGTGGTATTAAAAA
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