CN189429

Overview
NameCN189429
Unique NameCN189429
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN189429 vs. ExPASy Swiss-Prot
Match: NLTP_CICAR (Non-specific lipid-transfer protein OS=Cicer arietinum PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.090e-19
Identity = 33/52 (63.46%), Postives = 38/52 (73.08%), Query Frame = 3 
Query:  240 TTPDRQAACNCLKRAY*TIRGIKPNVAAGLPSQCGVRIPYKISPSTNCSRVR 395
            TTPDRQAACNCLK A  +I  +  N AA LP +C V IPYKIS STNC+ +R
Sbjct:   64 TTPDRQAACNCLKSAAGSISRLNANNAAALPGKCVVNIPYKISTSTNCATIR 115

HSP 2 Score: 48.1358 bits (113), Expect = 1.090e-19
Identity = 23/45 (51.11%), Postives = 30/45 (66.67%), Query Frame = 2 
Query:  113 NAITCGQVTASLDPCIPFLRTGGRFPPPPCCSGVRSLNGAARNHP 247
            +AITCG+V  +L PC+ +L+ GG  P   CC GVR+LN AA   P
Sbjct:   23 SAITCGRVDTALAPCLGYLQ-GGPGPSAQCCGGVRNLNSAAVTTP 66
[Close]
BLAST of CN189429 vs. ExPASy Swiss-Prot
Match: NLTP3_ARATH (Non-specific lipid-transfer protein 3 OS=Arabidopsis thaliana GN=LTP3 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.419e-19
Identity = 28/52 (53.85%), Postives = 39/52 (75.00%), Query Frame = 3 
Query:  240 TTPDRQAACNCLKRAY*TIRGIKPNVAAGLPSQCGVRIPYKISPSTNCSRVR 395
            TTPDRQ AC C++    +I G+ P++A+GLP +CGV IPY IS STNC+ ++
Sbjct:   64 TTPDRQQACRCIQSTAKSISGLNPSLASGLPGKCGVSIPYPISMSTNCNNIK 115

HSP 2 Score: 49.2914 bits (116), Expect = 1.419e-19
Identity = 23/47 (48.94%), Postives = 29/47 (61.70%), Query Frame = 2 
Query:  107 VTNAITCGQVTASLDPCIPFLRTGGRFPPPPCCSGVRSLNGAARNHP 247
            V  AI+CG V  SL PC  +L  GG   PP CC+GV++LN  A+  P
Sbjct:   21 VDAAISCGTVAGSLAPCATYLSKGG-LVPPSCCAGVKTLNSMAKTTP 66
[Close]
BLAST of CN189429 vs. ExPASy Swiss-Prot
Match: NLTP4_ORYSJ (Non-specific lipid-transfer protein 4 OS=Oryza sativa subsp. japonica GN=Os12g0114500 PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 3.123e-19
Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 3 
Query:  240 TTPDRQAACNCLKRAY*TIRGIKPNVAAGLPSQCGVRIPYKISPSTNCSRV 392
            TT DRQ  C CLK+    + G++P++ AG+PS+CGV IPY ISPST+CSRV
Sbjct:   68 TTADRQTTCACLKQQTSAMGGLRPDLVAGIPSKCGVNIPYAISPSTDCSRV 118

HSP 2 Score: 46.595 bits (109), Expect = 3.123e-19
Identity = 21/44 (47.73%), Postives = 26/44 (59.09%), Query Frame = 2 
Query:  104 PVTNAITCGQVTASLDPCIPFLRTGGRFPPPPCCSGVRSLNGAA 235
            P  +A+TCGQV + L PCI +       P   CC GVR+LN AA
Sbjct:   23 PAASAVTCGQVVSMLAPCIMYATGRVSAPTGGCCDGVRTLNSAA 66
[Close]
BLAST of CN189429 vs. ExPASy Swiss-Prot
Match: NLTP3_LENCU (Non-specific lipid-transfer protein 3 OS=Lens culinaris PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.063e-19
Identity = 33/59 (55.93%), Postives = 40/59 (67.80%), Query Frame = 3 
Query:  219 LSTAPPGTTPDRQAACNCLKRAY*TIRGIKPNVAAGLPSQCGVRIPYKISPSTNCSRVR 395
            L+ AP  TT DRQAACNCLK A   I  + P  AA LP +C V IPYKIS +TNC+ ++
Sbjct:   61 LAAAP--TTADRQAACNCLKTAAGNINNLNPGNAAALPGKCNVNIPYKISTTTNCNTIK 117

HSP 2 Score: 47.7506 bits (112), Expect = 4.063e-19
Identity = 22/40 (55.00%), Postives = 27/40 (67.50%), Query Frame = 2 
Query:  116 AITCGQVTASLDPCIPFLRTGGRFPPPPCCSGVRSLNGAA 235
            A++CG VT  L PCIP+L TGG  P   CC+GV+ L  AA
Sbjct:   26 AVSCGTVTGDLAPCIPYL-TGGAGPTDSCCAGVKKLLAAA 64
[Close]
BLAST of CN189429 vs. ExPASy Swiss-Prot
Match: NLTP2_TOBAC (Non-specific lipid-transfer protein 2 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.285e-19
Identity = 31/49 (63.27%), Postives = 36/49 (73.47%), Query Frame = 3 
Query:  249 DRQAACNCLKRAY*TIRGIKPNVAAGLPSQCGVRIPYKISPSTNCSRVR 395
            DR+ AC CLK A   I+GI    AAGLP  CGV IPYKISPST+CS+V+
Sbjct:   66 DRKTACTCLKSAANAIKGIDMGKAAGLPGACGVNIPYKISPSTDCSKVQ 114

HSP 2 Score: 48.521 bits (114), Expect = 5.285e-19
Identity = 22/46 (47.83%), Postives = 31/46 (67.39%), Query Frame = 2 
Query:  104 PVTNAITCGQVTASLDPCIPFLRTGGRFPPPPCCSGVRSLNGAARN 241
            P   A++CGQV + L PC+P+L+  GR P   CC GV+ L GAA++
Sbjct:   20 PHAEALSCGQVQSGLAPCLPYLQ--GRGPLGSCCGGVKGLLGAAKS 63
[Close]
BLAST of CN189429 vs. ExPASy Swiss-Prot
Match: NLTP_DAUCA (Non-specific lipid-transfer protein OS=Daucus carota GN=EP2 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.849e-19
Identity = 29/51 (56.86%), Postives = 39/51 (76.47%), Query Frame = 3 
Query:  240 TTPDRQAACNCLKRAY*TIRGIKPNVAAGLPSQCGVRIPYKISPSTNCSRV 392
            TT D++ AC CLK+    + G+  N AAGLP++CGV IPYKISP+T+C+RV
Sbjct:   69 TTLDKRTACGCLKQTANAVTGLNLNAAAGLPARCGVNIPYKISPTTDCNRV 119

HSP 2 Score: 46.595 bits (109), Expect = 8.849e-19
Identity = 22/41 (53.66%), Postives = 28/41 (68.29%), Query Frame = 2 
Query:  119 ITCGQVTASLDPCIPFLRTGGRFPPP-PCCSGVRSLNGAAR 238
            +TCGQVT +L PC+ +LR+    P P  CC+ VR LN AAR
Sbjct:   28 LTCGQVTGALAPCLGYLRSQVNVPVPLTCCNVVRGLNNAAR 68
[Close]
BLAST of CN189429 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLLC (Non-specific lipid-transfer protein 2 OS=Solanum lycopersicum GN=LE16 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.942e-19
Identity = 32/52 (61.54%), Postives = 37/52 (71.15%), Query Frame = 3 
Query:  240 TTPDRQAACNCLKRAY*TIRGIKPNVAAGLPSQCGVRIPYKISPSTNCSRVR 395
            T  DR+ AC CLK A  +I+GI    AAGLP  CGV IPYKISPST+CS V+
Sbjct:   63 TPEDRKTACTCLKSAANSIKGIDTGKAAGLPGVCGVNIPYKISPSTDCSTVQ 114

HSP 2 Score: 47.3654 bits (111), Expect = 8.942e-19
Identity = 21/45 (46.67%), Postives = 30/45 (66.67%), Query Frame = 2 
Query:  104 PVTNAITCGQVTASLDPCIPFLRTGGRFPPPPCCSGVRSLNGAAR 238
            P   +++CG+VT+ L PC+P+L   GR P   CC GV+ L GAA+
Sbjct:   20 PHAESLSCGEVTSGLAPCLPYLE--GRGPLGGCCGGVKGLLGAAK 62
[Close]
BLAST of CN189429 vs. ExPASy Swiss-Prot
Match: NLTP1_SORBI (Non-specific lipid-transfer protein 1 OS=Sorghum bicolor GN=LTP1 PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 8.942e-19
Identity = 31/51 (60.78%), Postives = 37/51 (72.55%), Query Frame = 3 
Query:  240 TTPDRQAACNCLKRAY*TIRGIKPNVAAGLPSQCGVRIPYKISPSTNCSRV 392
            TT DR+AACNCLK A   I G+    AA +PS+CGV +PY IS ST+CSRV
Sbjct:   67 TTADRRAACNCLKNAARGISGLNAGNAASIPSKCGVSVPYTISTSTDCSRV 117

HSP 2 Score: 48.521 bits (114), Expect = 8.942e-19
Identity = 22/41 (53.66%), Postives = 29/41 (70.73%), Query Frame = 2 
Query:  116 AITCGQVTASLDPCIPFLRTGGRFPPPPCCSGVRSLNGAAR 238
            AI+CGQV++++  C+ + R  G  P   CCSGVRSLN AAR
Sbjct:   26 AISCGQVSSAIALCLSYARGQGFAPSAGCCSGVRSLNSAAR 66
[Close]
BLAST of CN189429 vs. ExPASy Swiss-Prot
Match: NLTP_SPIOL (Non-specific lipid-transfer protein OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.513e-18
Identity = 35/55 (63.64%), Postives = 38/55 (69.09%), Query Frame = 3 
Query:  228 APPGTTPDRQAACNCLKRAY*TIRGIKPNVAAGLPSQCGVRIPYKISPSTNCSRV 392
            A   TTPDR+ ACNCLK A   I+GI    AAGLP  CGV IPY ISPSTNC+ V
Sbjct:   62 AAAATTPDRKTACNCLKSAANAIKGINYGKAAGLPGMCGVHIPYAISPSTNCNAV 116

HSP 2 Score: 40.0466 bits (92), Expect = 1.513e-18
Identity = 19/43 (44.19%), Postives = 26/43 (60.47%), Query Frame = 2 
Query:  119 ITCGQVTASLDPCIPFLRTGGRFPPPPCCSGVRSLNGAARNHP 247
            ITCG V++ L PCI +L+ G       CC G+++LN AA   P
Sbjct:   28 ITCGMVSSKLAPCIGYLKGGPL--GGGCCGGIKALNAAAATTP 68
[Close]
BLAST of CN189429 vs. ExPASy Swiss-Prot
Match: NLT2B_ORYSJ (Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica GN=LTP2-B PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.968e-18
Identity = 29/51 (56.86%), Postives = 35/51 (68.63%), Query Frame = 3 
Query:  240 TTPDRQAACNCLKRAY*TIRGIKPNVAAGLPSQCGVRIPYKISPSTNCSRV 392
            TT DR+ ACNCLK    +I G+    AA +PS+CGV IPY ISPS +CS V
Sbjct:   66 TTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 116

HSP 2 Score: 50.447 bits (119), Expect = 1.968e-18
Identity = 23/40 (57.50%), Postives = 29/40 (72.50%), Query Frame = 2 
Query:  116 AITCGQVTASLDPCIPFLRTGGRFPPPPCCSGVRSLNGAA 235
            AI+CGQV +++ PC+ + R GG  P   CCSGVRSLN AA
Sbjct:   26 AISCGQVNSAVSPCLSYAR-GGSGPSAACCSGVRSLNSAA 64
The following BLAST results are available for this feature:
BLAST of CN189429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
NLTP_CICAR1.090e-1963.46Non-specific lipid-transfer protein OS=Cicer ariet... [more]
NLTP3_ARATH1.419e-1953.85Non-specific lipid-transfer protein 3 OS=Arabidops... [more]
NLTP4_ORYSJ3.123e-1958.82Non-specific lipid-transfer protein 4 OS=Oryza sat... [more]
NLTP3_LENCU4.063e-1955.93Non-specific lipid-transfer protein 3 OS=Lens culi... [more]
NLTP2_TOBAC5.285e-1963.27Non-specific lipid-transfer protein 2 OS=Nicotiana... [more]
NLTP_DAUCA8.849e-1956.86Non-specific lipid-transfer protein OS=Daucus caro... [more]
NLTP2_SOLLC8.942e-1961.54Non-specific lipid-transfer protein 2 OS=Solanum l... [more]
NLTP1_SORBI8.942e-1960.78Non-specific lipid-transfer protein 1 OS=Sorghum b... [more]
NLTP_SPIOL1.513e-1863.64Non-specific lipid-transfer protein OS=Spinacia ol... [more]
NLT2B_ORYSJ1.968e-1856.86Non-specific lipid-transfer protein 2B OS=Oryza sa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001N12_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001N12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189429 ID=CN189429; Name=CN189429; organism=Citrus sinensis; type=EST; length=616bp
CGGTTGATAACTAGCTATAACCAAGCAAAAGCCTCCCTGAAGAATCCTCA
TGGCTGCTCTTAAGCTTGTTTGTGCTTTGCTTTTGTGCATTCTGGTGACT
GCCCCGGTGACTAATGCCATAACATGCGGGCAGGTGACAGCCTCCTTGGA
TCCATGCATCCCTTTCTTGAGAACTGGAGGGCGTTTTCCTCCACCGCCAT
GCTGTAGCGGCGTCAGGTCTCTCAACGGCGCCGCCAGGAACCACCCCTGA
CCGCCAAGCTGCATGCAACTGCTTGAAACGAGCTTACTGAACAATCCGCG
GCATCAAACCTAATGTTGCCGCTGGCCTTCCTAGTCAATGTGGAGTCAGA
ATTCCTTACAAGATCAGCCCCAGCACCAACTGCTCTAGGGTCAGGTGAAG
TTGAATTTGAGCTCTGTGACTTTCCAAGTATGATTGACTGATAAGAATAA
ATAAATAAAGAATATCTATGTTAATTTCTTTGTCCGAACGAGTCTCCACT
TGTATGAGTTTCACTCTCATGTCATGTGTGTATATTTGCTTGTTATGTCA
TATTAAATATGTAAACGCCATCTGTGTTTTGAGTGATTAATTATAGTTAT
TTTGTGGTATTAAAAA
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